MELO3C035428 (gene) Melon (DHL92) v4

Overview
NameMELO3C035428
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Locationchr12: 4309308 .. 4317009 (+)
RNA-Seq ExpressionMELO3C035428
SyntenyMELO3C035428
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATGCTTCCAACGAGTGGCGAACGCTCGTTCGGTGTCAGAAACCACTAGAAGTGCACTTGCAGCAAAGGAAACAGGCTGAGCTTAAGGACTTCTGGTGCTCGTACCAACAAAAGGCGAGAGAGAATGCCCCGGACTCAGTTTTCTCATCCTAGGGTAAAAAGCGGTTCTCCGACGGTTTCTTCCCTTTGCTCCGTATTCGTCATAAGTCTTTCAATCTTTGGGGCTCGTGCTTCGAGCACTTCAGTCCACACTCCTGGCATGCTCCTTCACACGTTTTCCCAAGGTATAGGTCGAGAAGAGAGCTCGTTGGAGGGACAACTGTGGTGCAACCCAAAAGGGTCCAAAAGATGGCCAATGCTTCCAACGGCACAACCTAATGATGCATCTAATACCACTGTGCCTAGAATGCCTTGGTATGTCTCTGCTCCTTAAAGCTATACAGGCAAGAAGCACTTTCTTTGATCGGGAGCTTGCATTCAATATAAGACAAGATCAGATTTCAGGGAGAAAGGTGTTAACACATGACTGATGACTGCAATTCATTTCAATCCTTGGGCTCATTTTCTTTAGTTACTCTTCGTTTCATTCAGAATAGCATAAATTTTCAAAAAAGAAAGGAGAAAGGTTCTCAAATTCTTTTAGCGTCTCATTGATAAGGACATATTAACCTATTCCATGAATGAGTCACCTGGACCTTTGTCTTTTGTTCTATGTAGCTTAATTTCCTCCATATGAACCTTTTTTTTCTTCATTCATCCGCCTTAATAGATCTGGATAGGTTTCTTTAGTTGGTTCTTAACTCCTTTTAGTTTCTAGTCGAACCTCTGAATTCCACTAACACACTTCGTGGGCATTGACTATACTATGGTCAAAAGGATTTCGCATCAATTCCATTGGCCCTCTCAAATCATTTTATAGCCACTTCTCCACCAAACCCAAAGGTCTTTTTTTCCACAAAGAAAGAATGTTCACTTTTGAGACCTATCCAGAGAAAGCAAGGTGCATTCATTCTGGTCAATCTAGGTAAGAGGAATGTTTAGCCTCTCATAATTAAGGCGAGTATCCGATTCACACACCTAGTTTCATTGCATCTCTGTACTCAATCCCCTTATTTGTCTCCCAGAACTGGCCTTATCTGGGGTCATTCATTGTTGTGGAATTCGAGACCTCCCTGTCTGAGGGTATATAAGCTTGGGGCCCTTATTCTCCTTAGGAATGGGTCCGAGCCAACAACTCTAGTTTCATTACAAAGATATATCATTCCAGGATCTATTGCTCAAATAGAATCAGACCAATGTTATGGAAGTTCCTGGATCATCTTCAATGAGAGTCATGCCAAAGGAACCCTATGATTTTAGGAGAAAAAATGGAAAATTGGCTATAGAGATCCTGCGCAGTTAGAAATTGATACAGACAAGGGGTTCGATAGTGATCTAGTGCAAGGATATTTTTGAGTCAAATAAAGATAAAGGATATGTTAGTGATCTAGCACGAGAAAGCACTCTCCGAGTCCATGAAATGTCTAATTTTTCTTTCAAAGTCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGACCGAAATACAAGAAAACTCCATTCAATTCTCGATGGAATCAAAGTTTTTCAAATTTTTCCTAGAATTGACAGATCATTTCGAGATCTTCTCTAAGACTCTAAGGTTCAATGTGACCATTGTCACTTTTGCCAAGACAAAAGATGAGACTTTACAACTGTAAAGCGGCTTTTTGAAAAAAAATCGAATTTGAGAAAAAAGAAAAGATTGAAGTTGAAATCCAACTTCTTGAAATAAAGAACTTGCAATCACTAGATTTCTTAGATTCTAAAAATAATCAATACACCTTAGTACTTCGTCCACCCAGCTCGCTTCCTGACCTATACTTTGAGTAAATGTGTGAGGGCCAGTGCCAAGAATATAGATTGAAGTTCTCAAAGTATGAGTCCCAAAGCTCGAAACACTTATGACCAATAAAAAACAAAGGAATCGTTGAAGGACCGCTTTTTGGCTCGAGATACAAAAACTTAGTAAGAGGCATTCTCGTTCGAATTTTCTTGGGAAGAACACAAGAAGTTATTGAGCTTAGCCCGTTTCCTTCGTTGAATTGCATTTTTAGTAGTTTCTCACACCGGATGAGCATTCACCACTCGTTGGAAGAGCATTGACCATCTTTTCCATCGTTTCAGATTGCACCTTAGTTCTCCCTACAAGGAGCTCGATTACCGACTATACTTTGGGAAAATGTGTGAGGGACGATGCCAGCAATATAGACTGAAGTCTTTAGAGAATGAGTCCTGAAGCTCGAAGCACTTATAACCAATACAAAACAAAGAAATTGTCCAAGGACTGCTTTTTATCCCGAGATAGAAAAATTGAGTCTGGGGCATTCTCATTTGTATTTTCTTGGGACGAACACTAGAAGGCCTTAAGCTTAACCCGTTCCTCTTGCTGAAATGCATTTTCAATGGTTTCTGAAACAAGACGAGCGTTCGCCACTCATTGGAAGAGCATTGGTGGCCATCTTTTTTTATCGTTTCAGGTTGCATCTTAGTTCTTCGTCCAACGAGCTCACTTCCCGCCCTATAGTTTGGGTAAATGTGTGAGGAACGATGCTAGGAATATAAACTGAAGTCCTTAAAGTATGAGTCACGAAGTTTGAAACACTTGTGCCCACTACAAAACAAAGAAGCCGTTGAAGGAAGCTTTTTAATCCGAGATAAAAAAACTGAGTCCGGGGTATTCTCGTTCGCATTTCCTTGGGACGAACACCAAAAGTTCTTTAGCTTAGCTCGTTTCCTTCGCTGAAATGCATTTTCAGTGGTTTCTGAAACTAGACGAGCGTTTGCCACTCGTTGGAAGAGAATTGGCCATCTTTTCGATTGTTTCGAGTTACATCTTAGTTCTTCATCCAACGAGCTCGCTTCCCAACCTATACTTAGGGAAAATGTGTGAAGGACGATGCTAGGAATGTAGACTGAAGTCCTTGGAGTATCAGTCTGGAAGCTCGAAACACTTATGACCAATAAAAAATAAAGACATCGTTGAAGGACCAGTTTTACCCCGAGGTAGAAAACTGAGACCGGAGCATTCTCGTTCACATTTTCTTTGCACGAACACTAGAAGTTCTTGAGCTCAACCTGTTTCCTTCGCTCAAATTCATTTTCAATGGTTTCTGACATCGGACGAGCATTTGCCACTCATTAGAAGAGCATTGGCCATCTTTTCAATCGTTTTGGGTTGTACCTTAGTTTACCCTCCAACGAGCTCGCTTCCCGACCTATACTTTGCAAAAATATGTGACTGGCGATGCTACGAATATAGACTGAAGTCCTCGAAGTATGAGTTTCGAAGCTCGAAACACTTATGAGCAATACAAAACAAAGTAACCTATGAAGAACTACTTTCTACCTTGAGATAGAAAAATTGAGTTTGGGGCATTCTCGGTTCGCATGTTCTTAGGACAAACTCTAGAAGTTCTTGAACTTAGCCTGTTTCCTTCGTTAGAATGCATTTTCAGTGGTTTATGGCCCCAGACGAGCGTTCGTGACTCGTTGAAAAAGCATTGGCCATCTTTTCAATAGTTTTAGGTAGCATTTTATTTCTTTGTCCAACGAGGTCGCTTCCTGACCTATACTTTGGGAAAATGTGTGAGGAACGATGTCAAGAATATAGACGGGTGTCCTTGGAATATGGGTCATGAAGCTTGAAACACTTATGGCCAATGCAATACATAAAAACCGTTGAAGGACCGCTTTTTGCACTGAGTTAGAAAAACTGAGTCCTAGGCATTCTTGCTCGCATTTTTCTAGGACGAACACCAGATGTTCTTGAGCTTAGCCTGTTTCATTCGTCGAAAGTGCATTTTTAGTGGTTTCTGACACCGAACGAGCGTTCACGACTATGCCAAAAATGTAAACTGAACTTCTCGGAGTATGAGAGTCTAAGCTCGAAACACTTTTGACCCACAAAAAAATCGTTAAAGGACCGCTTTTTACAGTGAGAATGAAAAACTGAGTTCGGGGCATTCTTGTTTGCATTTTCTTGGGAAAAACACCAGAAGTTCTTGAGCTTAGCATGTTTCTTTTGCTGAGATGCATTCTCAGTGGTTTCTAAAACCCCACCAGCATTCGCCACTCGTTGGAACAACATTGGCCATCTTTTCGATTGTTTTGGGTTGCACCTTAGTTCTCCCTTCAACTAGCTCGCTTCTCGAGCTATTTTTTGGGAAAATATGTGAGGGACGATGTCAGAGATGTAGAATAAAGTTCTCAGAGTATGAGTCTCGAAGCTCTAAACACTTATGACCAATGCAAAACAAAGAAATCGTTGAAGAACCGCTTTTTATCCTGAGATCGAAAAATTAAGTCTGGGGAATTCTCGTTCACAGTTTCTTTGGACGAACACCAGAATTTTTGGAGCTCAGCCCGTTTGCTTCACTGAAATTCATTTTTAGTGGTTTCTGACACCGAACGAGCATTCGACACTCGTTGAAGGAGCATTGGCCATATTTTCGATCGTTCTAGGTTACACCTTAGTTCTCCCTCCAATGAGCTTGGTTCTTGAGCCATACTTTATGAAAATGTGTGAAGGAGGATGCCAGGAATGTAGACTGATGTCCTTGAAGTATGAGTACCGAAGCACTGAACACTTATAACCAATACAAAACAAAGAAACCGTTCAAGAACCGCGTTTTACCCCGAGATAGAAAAATTGATCCCGGGGTATTCTCGTTCGCATTTTCTTGGGACGAACACCAGAACTTCTTGAGCTTAGCCCGTTTCTTTTACTGAAATGCAATTTCAAAGTTGTGAAAAGTCAAAATGTTGACTTTTCACTTTTGACTTTGAAAAGTCAAACTTTAACCGAGTTTATATTCAAATGTGATTTGAATTTCAGAAAAATGAATGCAGATTCATACTCGGGTGGTCGAAATTAGTCAAGACGAACGAAATGGTAAAAAGTTAAAATGTTGACTTTTGACTTTAACTAGAATTGTCAAAAGATCATTTTGCCGTTTGAGCAAAATTAGTGAAAAAATCCAACATTTTGGTGGATAATTCCATTAACTCTTAGTGGGCTACATGGAAGCTCATGATGATGACACCAAGTCCACTAAGAGAAAATGGAATGGTGAATCAATCCACTAATGGTTAGGGGATTGTGAAATGTTGGGCTTTGATGATCCAATTTCATGCAAATTTTGCATGTAATTAGTCTATTTAAGGGGAAATTTTCATTTTGAAGAAGAATTTTGCCATTTTTTGTAATTTTAAATTACAAAAAGTGAACCTTTTTCTTTCCCAAATCTCACACAAAAATGTACCACCAAATTCAATCTCTTTCTCAAATTTTCTACTTTAAACAAGTCCCACAACCCGATTCCAAGTCCAGAAATAGCGGGTAAACTCTAGTGTGGTCTGGTTCGAGTTCGGGAGAAGTTTTCGAGATTTAAAAAAGCTACAAGGTATGTTTTCTTTTTGACACTAATTTAGTGTAATTAGGGTTGTGTTTTATACATGTTATTCTTTAGGTGTTTAGATGCTATTATAGTAAAATTCGATCCTTTTATCTGCTGCACATGTTTCGTATCCTTCAGCCACGAATGTAGACTTAAGTCCTCGGAGTATGAGTCCCCAAGCTCAAAAAACTAATGATCAATACAAAACAAAGAAACCTAGAAGAACTACTTTTTACAACGAGTTTGAAAAACTGAGTCTGGGGCGTTCTCGTTCGCATTTTCTTTGAACGAACACCAGAAGTTCTTGAGCTTAGCCCATTTCCTTCATTGAAGTGCATTTTTAGTGGTTTCTTGCACCGGACGAGCGTTCGTCACTCGTTGGAAGAGCATTGGCAAACTTTTTTTTCGTTTCGGGTTGCACCTTAGTTCTCCCTCCAACGAGCTCACTTCCCAAACTATACTTTGGGAAAATGTGTGAGGGAAAATGCTAGGAATGTAGACCGAAGTCCACGGAGTATGAGTCCCAAAGCTCGAAACACTTCTGACCAAGACAAACCAAAGAAACCATTGAATGGCTGCTTTATACCCTGAGAAAGAAAAACTGAGTCCGAGACATTCTCGTTTGCATTTTCGTGGTACGAACACCAGAAGTTCTTGAGCTTAGCCCGTTTCCTTTGTTGAAATCATTTACAGTGGTTTCTGACATCGAACGAGCATTCGCCACTCGTTGGAAGTGCATTGACCAACTTTTATATCCTTTCGGGCTGCACCTTAGTTCTCCCTCCAACGAGCTCGCTTCCCAACCTAGACTTTGGGAAATGCATTTTTAGTGGTTTCTCACACCAGATGAGCGTTCGCCAGTTGTTAGAAGAGCATTAGCCATCTTTTTGATCAATTCGAGTTACAACTTAGTTCTTCCTCCAACAAGCTCCCTTACCGACCTATACTTTGGGAAAATATGTGAGGGATGATGGCAGGAATGTAGACTGAAGCTCTCGAACTATGAGTCCCAAAGCTCGAAACACATATGACGAATACAAAACAAAGAAACCGTTGTAGGAGCGATTTTAACAAAGAGATAGAAAAACTGAGTATCAAACATTATTTTTTGCATTTTCTTGGGTCGAACACTGGATGTTCGTGAGCTTAGCACCTTTCCTTCACCGGAGGTGCATTTTTAGTGGTTTTTGACAACGGACAAGTAATCGCCACAGGTTGAAAGTGCATTTGCCATCTTTTCCATTGTTCCGGGTTGCACCTTAGATCTCCCTCCAACGAGCTTGCTTCTCGACCTATACTTTGGGAAAATGTGTGAAGGATGATGCCAGGAATGTAGATTGAAGTCCATGGAGTATGAGTCCCAAAGCTCGAAACACTTATGACCAATACAAAACAAAGAAATCATTGAAGGTTCGCTTTTTACCTCAAGATACAAAAAGTGAGCCCGTGGCATTCTAGTTCGCATTTTATTGGGACGAACACTAGATGTTCTTGAGCCTAGCTCGTTTCCTTCGTAGAGATGCATTTTCAGTGGTTTTTCACACCATACGAGCATTTGCCACTCGTACGAAGAGCATTGGCCATCTTTTCAATCGTTTCGGGTTGCACATTAGTTCTACTTCCAAGAGCTTGCTTTTCAACCTATACTCTGGGAAAATTTGTAAAGGACGATGCAAGGAATGTAGACTATAGTCCTCGGAGTATGAGCCCCGAAGCTCGAAACACTTATGACCAATACAAAACAAAAAATCGTTAAAGGACTGCTTTTTACCTCGAGATAGAAAAACAGAGTCTAGGGCATTCTCGTTTCCATTTTCTTGGGATGAACACCAAAAGTTCTTGAGCCTAACCGATCTTCTTTACTTCAAGTGCATTTTCTGTGGTTTCTAATACTGGACGAGCATTCACCACTCGTTGGAAGAGCATTGTCCATATTTTCTATCGTTTGGGGTTACACCTTCGTTCTCCCTCCAACGAGTTCCCTTTCAAACTTATACATTTGAAATATATGTGAAGGACGATGTCAGGAATCTAGACTAAAGTCTTCAGGGTATGAGTCCCGAAGCTCGAAACACTTATGACCAATACAAAGGAAAGAAACCGTTGAAGGATCGCTTTTTACACCAAGATAGAAAAACTGAGTCCGAGGCATTCTCTTTCGCATCTGCCTGGGATGAACACCAGAAGTTCTTGAGCTTAGCCAACTTCCTTCACTAA

mRNA sequence

ATGGCCGATGCTTCCAACGAGTGGCGAACGCTCGTTCGGTCAAAGGAAACAGGCTGAGCTTAAGGACTTCTGGTGCTCGTACCAACAAAAGGCGAGAGAGAATGCCCCGGACTCAGTTTTCTCATCCTAGGGTAAAAAGCGGTTCTCCGACGGTTTCTTCCCTTTGCTCCGTATTCGTCATAAGTCTTTCAATCTTTGGGGCTCGTGCTTCGAGCACTTCAGTCCACACTCCTGGCATGCTCCTTCACACGTTTTCCCAAGGTATAGGTCGAGAAGAGAGCTCGTTGGAGGGACAACTGTGGTGCAACCCAAAAGGGTCCAAAAGATGGCCAATGCTTCCAACGGCACAACCTAATGATGCATCTAATACCACTGTGCCTAGAATGCCTTGGTTGCATCTTAGTTCTTCGTCCAACGAGCTCACTTCCCGCCCTATAGTTTGGAAAAATGAATGCAGATTCATACTCGGGTGGTCGAAATTAGTCAAGACGAACGAAATGGGTATGAGTCCCGAAGCTCGAAACACTTATGACCAATACAAAGGAAAGAAACCGTTGAAGGATCGCTTTTTACACCAAGATAGAAAAACTGAGTCCGAGGCATTCTCTTTCGCATCTGCCTGGGATGAACACCAGAAGTTCTTGAGCTTAGCCAACTTCCTTCACTAA

Coding sequence (CDS)

GGCCGATGCTTCCAACGAGTGGCGAACGCTCGTTCGGTCAAAGGAAACAGGCTGAGCTTAAGGACTTCTGGTGCTCGTACCAACAAAAGGCGAGAGAGAATGCCCCGGACTCAGTTTTCTCATCCTAGGGTAAAAAGCGGTTCTCCGACGGTTTCTTCCCTTTGCTCCGTATTCGTCATAAGTCTTTCAATCTTTGGGGCTCGTGCTTCGAGCACTTCAGTCCACACTCCTGGCATGCTCCTTCACACGTTTTCCCAAGGTATAGGTCGAGAAGAGAGCTCGTTGGAGGGACAACTGTGGTGCAACCCAAAAGGGTCCAAAAGATGGCCAATGCTTCCAACGGCACAACCTAATGATGCATCTAATACCACTGTGCCTAGAATGCCTTGGTTGCATCTTAGTTCTTCGTCCAACGAGCTCACTTCCCGCCCTATAGTTTGGAAAAATGAATGCAGATTCATACTCGGGTGGTCGAAATTAGTCAAGACGAACGAAATGGGTATGAGTCCCGAAGCTCGAAACACTTATGACCAATACAAAGGAAAGAAACCGTTGAAGGATCGCTTTTTACACCAAGATAGAAAAACTGAGTCCGAGGCATTCTCTTTCGCATCTGCCTGGGATGAACACCAGAAGTTCTTGAGCTTAGCCAACTTCCTTCACTAA

Protein sequence

GRCFQRVANARSVKGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHLSSSSNELTSRPIVWKNECRFILGWSKLVKTNEMGMSPEARNTYDQYKGKKPLKDRFLHQDRKTESEAFSFASAWDEHQKFLSLANFLH
Homology
[Close]
BLAST of MELO3C035428 vs. NCBI nr
Match: KAA0059489.1 (ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-46
Identity = 99/107 (92.52%), Postives = 100/107 (93.46%), Query Frame = 0 

Query: 34  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREES 93
           MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREES
Sbjct: 1   MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREES 60

Query: 94  SLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHLSSSSNEL 141
           SLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMP  H S+    L
Sbjct: 61  SLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMP-CHFSTKPKGL 106

[Close]
BLAST of MELO3C035428 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-25
Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = 0 

Query: 14   KGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTS 73
            +GN L+ RTSGA   K R RMPR+QFS    KS +PTVSSLC V VI+LSIF AR   TS
Sbjct: 1518 EGNGLNSRTSGASPKKTRARMPRSQFSRSGAKSDTPTVSSLCFVLVINLSIFEARTPRTS 1577

Query: 74   VHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA 116
             HT GML   FS+GIG+E SSLEG+LWCNPK SKRW MLPT+
Sbjct: 1578 THTTGMLPDMFSRGIGQEASSLEGELWCNPKRSKRWTMLPTS 1619

[Close]
BLAST of MELO3C035428 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-22
Identity = 83/207 (40.10%), Postives = 96/207 (46.38%), Query Frame = 0 

Query: 13  VKGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASST 72
           ++GN LS RTSGAR  K R RMP+TQFS P  KS  PTVS+LCSV V SLSIFGA    T
Sbjct: 277 IEGNGLSSRTSGARPKKTRARMPQTQFSRPGPKSDPPTVSTLCSVLVRSLSIFGAPTPRT 336

Query: 73  SVHTPGMLLHTFSQ---------------------------------------------- 132
           S HTPGML  TFS+                                              
Sbjct: 337 STHTPGMLPDTFSERECPRLSFLVLGKLWSPDGFFPLLRIGHKSVDLRGSTPRTSTHTSG 396

Query: 133 --------GIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHLSSSSN 163
                   GIGRE SSLEG+L C+PK SKRWPMLPT        ++  R  W    S  N
Sbjct: 397 MLPDTFSGGIGREASSLEGELLCDPKPSKRWPMLPTG----GERSSGFRNHWKCTCSEGN 456

[Close]
BLAST of MELO3C035428 vs. NCBI nr
Match: TYK15439.1 (uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 44  VKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNP 103
           VKSG PTVSS+CSV VI LSIFGA    TS HTPGML   FS GI RE  SLEG+LWC+P
Sbjct: 129 VKSGPPTVSSICSVLVIGLSIFGASVPRTSTHTPGMLPDMFSGGIDREARSLEGELWCDP 188

Query: 104 KGSKRWPMLPTA 116
           K S+RWPMLPT+
Sbjct: 189 KRSERWPMLPTS 200

[Close]
BLAST of MELO3C035428 vs. NCBI nr
Match: TYK23424.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-18
Identity = 64/130 (49.23%), Postives = 77/130 (59.23%), Query Frame = 0 

Query: 14  KGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTS 73
           +GN LS RT G    K   R P+ QFSH  VKSG PTVSSL  + +I L +FGA   + S
Sbjct: 636 EGNMLSSRTFGNLPKKTGARKPQIQFSHAGVKSGHPTVSSLL-LRIICLLMFGAPNPTNS 695

Query: 74  VHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHL 133
            HTP ML HT S GIGRE SSLE +LWC+PK SK W ML T+       ++  R  W   
Sbjct: 696 THTPDMLSHTLSYGIGREASSLEEELWCDPKRSKSWLMLQTS----GGRSSDVRNHWKCT 755

Query: 134 SSSSNELTSR 144
            +  N+L SR
Sbjct: 756 CNERNKLMSR 760

[Close]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match: A0A5A7V129 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002350 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.5e-47
Identity = 99/107 (92.52%), Postives = 100/107 (93.46%), Query Frame = 0 

Query: 34  MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREES 93
           MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREES
Sbjct: 1   MPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREES 60

Query: 94  SLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHLSSSSNEL 141
           SLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMP  H S+    L
Sbjct: 61  SLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMP-CHFSTKPKGL 106

[Close]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 9.1e-26
Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = 0 

Query: 14   KGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTS 73
            +GN L+ RTSGA   K R RMPR+QFS    KS +PTVSSLC V VI+LSIF AR   TS
Sbjct: 1518 EGNGLNSRTSGASPKKTRARMPRSQFSRSGAKSDTPTVSSLCFVLVINLSIFEARTPRTS 1577

Query: 74   VHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTA 116
             HT GML   FS+GIG+E SSLEG+LWCNPK SKRW MLPT+
Sbjct: 1578 THTTGMLPDMFSRGIGQEASSLEGELWCNPKRSKRWTMLPTS 1619

[Close]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-22
Identity = 83/207 (40.10%), Postives = 96/207 (46.38%), Query Frame = 0 

Query: 13  VKGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASST 72
           ++GN LS RTSGAR  K R RMP+TQFS P  KS  PTVS+LCSV V SLSIFGA    T
Sbjct: 277 IEGNGLSSRTSGARPKKTRARMPQTQFSRPGPKSDPPTVSTLCSVLVRSLSIFGAPTPRT 336

Query: 73  SVHTPGMLLHTFSQ---------------------------------------------- 132
           S HTPGML  TFS+                                              
Sbjct: 337 STHTPGMLPDTFSERECPRLSFLVLGKLWSPDGFFPLLRIGHKSVDLRGSTPRTSTHTSG 396

Query: 133 --------GIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHLSSSSN 163
                   GIGRE SSLEG+L C+PK SKRWPMLPT        ++  R  W    S  N
Sbjct: 397 MLPDTFSGGIGREASSLEGELLCDPKPSKRWPMLPTG----GERSSGFRNHWKCTCSEGN 456

[Close]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match: A0A5D3CZ27 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00010 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 44  VKSGSPTVSSLCSVFVISLSIFGARASSTSVHTPGMLLHTFSQGIGREESSLEGQLWCNP 103
           VKSG PTVSS+CSV VI LSIFGA    TS HTPGML   FS GI RE  SLEG+LWC+P
Sbjct: 129 VKSGPPTVSSICSVLVIGLSIFGASVPRTSTHTPGMLPDMFSGGIDREARSLEGELWCDP 188

Query: 104 KGSKRWPMLPTA 116
           K S+RWPMLPT+
Sbjct: 189 KRSERWPMLPTS 200

[Close]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match: A0A5D3DIF8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00100 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 64/130 (49.23%), Postives = 77/130 (59.23%), Query Frame = 0 

Query: 14  KGNRLSLRTSGARTNKRRERMPRTQFSHPRVKSGSPTVSSLCSVFVISLSIFGARASSTS 73
           +GN LS RT G    K   R P+ QFSH  VKSG PTVSSL  + +I L +FGA   + S
Sbjct: 636 EGNMLSSRTFGNLPKKTGARKPQIQFSHAGVKSGHPTVSSLL-LRIICLLMFGAPNPTNS 695

Query: 74  VHTPGMLLHTFSQGIGREESSLEGQLWCNPKGSKRWPMLPTAQPNDASNTTVPRMPWLHL 133
            HTP ML HT S GIGRE SSLE +LWC+PK SK W ML T+       ++  R  W   
Sbjct: 696 THTPDMLSHTLSYGIGREASSLEEELWCDPKRSKSWLMLQTS----GGRSSDVRNHWKCT 755

Query: 134 SSSSNELTSR 144
            +  N+L SR
Sbjct: 756 CNERNKLMSR 760

The following BLAST results are available for this feature:
BLAST of MELO3C035428 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035428 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0059489.11.1e-4692.52ribosomal protein L5 [Cucumis melo var. makuwa][more]
KAA0062888.11.9e-2565.69non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... [more]
TYK22521.15.7e-2240.10uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa][more]
TYK15439.11.0e-1870.83uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa][more]
TYK23424.13.8e-1849.23gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1295.5e-4792.52Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7V5J29.1e-2665.69Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... [more]
A0A5D3DFP22.7e-2240.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CZ274.8e-1970.83ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3DIF81.8e-1849.23Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G0010... [more]
BLAST of MELO3C035428 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035428.1MELO3C035428.1mRNA