MELO3C035426 (gene) Melon (DHL92) v4

Overview
NameMELO3C035426
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBeta-galactosidase
Locationchr09: 20338382 .. 20343071 (-)
RNA-Seq ExpressionMELO3C035426
SyntenyMELO3C035426
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAGGTTGACACTAGCAGAACATCTTCACTTCAAAATGTGACTCTGCAAGTGAATACAAAGGGTCATGTGCTTCATGCTTTCGTTAATAAAAGATACATTGGGTCGCAATGGAAGAGTAATGGCCAGAGTTTTGTGTTTGAGAAACCCATTCTACTAAAATCGGGAACCAACACAATAACTCTTTGAGTGCCACGGTTGGGTTGAAGAATTACGATGCATTTTATGATATGGTACCTACGGGAATCGATGGAGGTCCCATCTATCTAATTGGAGATGGAAATGTGACAACTGATTTGTCATCAAATTTGTGGTCTTATAAGGTTGGATTAAATGGAGAAATGAAGCAAATTTACAACCCGATGTTCTCAGAGAGAACAAATTGGATTGCATTAAATAAAAAATCTATTGGAAGGCGAATGACATGGTACAAGACTAGCTTTAAGACACCTGGTGGAATTGACCCAGTGGTCTTGGACATGCAAGGAATGGGAAAAGGCCAAGCTTGGGTAAATGGACAAAGCATAGGCCGATTTTGGCCATCTTTCATTGCCGGCAATGACAGTTGCAATGCAACATGTGACTATAGAGGTGCATACGACCCTAGCAAATGTGTGCAAAATTGTGGAAATCCTTCTCAAAGATGGTATCATGTTCCAAGATCATTTCTTTCGAGCGACAAAAACACATTGATTTTATTCGAAGAAATTGGTGGAAATCCACAACAAGTGTCAGTTCAAACAATAACAATTGGAACTATATGTGGAAATGCTAATGAAGGAAGCACCTTAGAGTTGTCTTGTCAGGGAGGACATGTCATCTCTGAAATCCAATTTGCAAGCTATGGAAATCCAGAAGGAAAATGTGGTTCGTTTAAGCAAGGTTCATGGGATGTGACAAACAGTGCTCTTTTTGTGGAGAAAGCTTGCATTGGCATGGAAAGTTGTTCAATTGATGTATCTGCAAAGTCATTTGGATTAGGCGATGTTACAAATTTATCTGCAAGATTGGCAGTCCAAGCACTATGTGCACAAAATTGATTAATGGTGTAATATATATGCATAAATATTAACATTTAACAAACTATGTATTTTTATTTTCTTTCGTTTCATTAGTATGATTTCTTAATCACAAACGTATAAGAAACGATTAACACCTCATGGTGTATTGATGATAGACCATATTAAAAATATTGGTTTTATCACAGATAACCCATAAAAGTCTCAGTAGAAGTCTGTCACTAAACTATGCTATATTTGAAATTTTTTAAAAACGTTGTTATATGCTTAAGCATTATTCTTAATTAAAAAGAAATAGCCATCCATACTAAAACTCCATTCGAAGGGAATTAGAGGAATAAATTATGAGTCTTCAACTGTAGAGTGAAAACCTCCTATAAGGACATATAAAAATGAGATGTTTTAAGCAGAGTTTTTAAGTTGTACACATTTTTTTAAAAATTAACTTGCAGTACTGATTTATTTTATTACAACTTTTTCTTTTTAAGTATTTTTATACTTTTTTTAGAAATATATAAAAAAAATTATTTTTTAATTACAAAAATGTAGAGTTCATTGTATAACATATATTTTGCCTATTTAATACATTTGTAAAGAAACTCATTGTTAAACTAAGCAAATAATCATATACATTTTTTTTTTGTTTCAATTGGTTGATTCAAGAGATGAACTTTTAATAAGTTTTTTCTGAATTCACTTTAGTGACAAGTTAAATTGTTATTTTTAGACTCAATTCAATTATGTAAATAAGAATACATAATTAGATATGTAAAACAAATATTCTTAAAGTAAATAATAATACAAATAAACATTTTATTTTGTTCGAAATATGTAGAATGTAGAATGGTATTACATATCTAAGAGTCCATTCTAAACAAAAACTATGGATCCATCGGCCCCAATTTTCACTCATAAACACAACAAATCTAACTTTGACATTGTAATCAAATGTTAGGTAATTGGACTCTAGACAACAAACCTGATCGTAATCAGATTTCCAGTAAAACTGGATTATTTATTACATAAAAGAAACTATATCATTCATTACACTTAGTTACGACAATCTTAGTATAATTTTTCTCTGAAGTCTTTAACTTTTGTCTCTTGCTGGGGCGTGTGACATTCAACGCTCATCCTTCGTAGGGACCTCTACTGTCCCATGGGGTGTCTTTATAAGATGGTGGAAGCCGATTTCCTACGTTTGCAATTTAAGATAACATACTTATTTGAGTTATTTTCAAGTATACCAAAATGAACCATAATATTTACGAAATATCGCAGTCTATCATAAATCGTGATAGATCAAGTTAGACTATTATACGTGTCCTACTGTAATCTATCACACATAGATGATGATATTTTACTACGTTTATAAACATTTCAAAATTTTTGTCATTTAAAATAATTTTTCTATTTATTTCATTTCTAAACAATATTATTATTAATTGATAAATATAACACAAAGGAATTTCATTAAACTACTATTAGAAACAATTAATATTATATATTTAATGTAAATATATATAATTATATCCATCTATCTATTTATATTCAATTGCTCATATTATATTAAGCTCAACCTAAAGTCGATGGCTTACAACCTTAAACCAAATGTCAAAAATGAAAAATAGAATCCTATGTTTGTTGGGAAAAAAACACAATTTTGTTAGTTGCGTGTAATAATTGTATTTTCGGTAAAAGGTTATTTAATTAAGGATAAGGTAAACTAGAATTCTCAAATTTTAAAGGATGCAACTCATATCGAAAAACTTTTGTGAGTTGTTTTTCTATCTTTAGAATTAATCAACAACTTGAATACAAATTTAGATAGGAAAGAACTCTCACCTTATCACTATGTATTCTATATAAATAAACACATCGATTGAGGGAAAAAAAATAAACCAAAGACACAAGTTGTGGGATCAAAGATGTTTAAGCTTCAATGGCTTGTTGCAATTACTCTAGCTTGCTTGACATTCTGCATAGCAGATAATGTTTCATATGATTCAAATGCGATAATTATAAATGGAGAACGACGTATTATCTTCTCGGGCTCAATTCATTATCCACGCAGCACTGAAGCAATGTGGCCTGATCTTATTCAGAAAGCTAAAGATGGTGGACTTGATGCAATTGAGACATACATTTTTTGGGATCGTCACGAGCCACAACGAAGAAAATATGATTTTTCTGGACGTTTAGATTTCATTAAATTCTTTCAGCTTGTCCAAGATGCTGGACTTTATGTTGTCATGAGGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGCTTTCCAGTGTGGTTGCACAATATGCCAGGAATCCAACTACGAACTAACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACAAAGATAGTGAATATGTGTAAACAAGCCAATCTCTTTGCTTCACAAGGAGGGCCAATAATATTAGCTCAAATTGAGAATGAGTATGGAAATGTGATGACACCAGCTTATGGAGATGCAGGAAAAGCATACATCAATTGGTGTGCTCAAATGGCCGAATCTCTCAATATTGGCGTTCCATGGATCATGTGCCAACAAAGCGATGCCCACAACCTATCATTAATACATGCAATGGATTCTACTGCGATAACTTTACTCCAAACAATCCTAAGAGCCCAAAAATGTTCACTGAAAATTGGGTGGGATGGTTCAAGAAATGGGGCGACAAAGACCCTTACAGAACTGCAGAAGATGTAGCATTTTCTGTGGCAAGATTTTTTCAATCTGGTGGCGTCTTCAATAATTATTACATGTATCATGGAGGCACCAACTTTGGGAGAACATCGGGAGGTCCATTCATCACTACATCTTACGATTACAACGCCCCACTTGATGAATATGGGAACTTGAATCAACCTAAATGGGGGCATCTCAAACAACTTCATGCATCAATCAAGTTAGGAGAGAAGATTCTCACTAATGGCACACGCTCAGACCAAAACTTTGGAAGCTCTGTAACTTTAACGAAATTCTTTAACCTAACAACAGGGGAGAGGTTTTGCTTTTTAAGCAACACAGATAGAAAAAATGATGCCACCATAGATCTACAAGGAGATGGAAAATATTTGTACCAGCTTGGTCTGTGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAACACTGCAAAAGTAAATTCTCAGACATCTATGTTTGTGAAGGAGCAAAATGAGAAGGAAAATGCACAACTCTCGTGGACTTGGGCTCCAGAACCTATGAAAGACACACTACAAGGAAATGGTAAATTTGCGGCAAACCTTCTCTTGGAACAAAAGAGGGTCACAGTTGATTTTAGCGACTACTTCTGGTACATGACGAAGGTTGACACTAGCAGAACATCTTCACTTCAAAATGTGACTCTGCAAGTGAATACAAAGGGTCATGTGCTTCATGCTTTCGTTAATAAAAGATACATTGGGTCGCAATGGAAGAGTAATGGCCAGAGTTTTGTGTTTGAGAAACCCATTCTACTAAAATCGGGAACCAACACAATAACTCTTTTGAGTGCCACGGTTGGGTTGAAGAATTACGATGCATTTTATGATATGGTACCTACGGGAATCGATGGAGGTCCCATCTATCTAATTGGAGATGGAAATGTGACAACTGATTTGTCATCAAATTTGTG

mRNA sequence

ATGACGAAGGTTGACACTAGCAGAACATCTTCACTTCAAAATGTGACTCTGCAAGTGAATACAAAGGGTCATGTGCTTCATGCTTTCGTTAATAAAAGATACATTGGGTCGCAATGGAAGAGTAATGGCCAGAGTTTTGTGTTTGAGAAACCCATTAGAAACCCATTCTACTAAAATCGGGAACCAACACAATAACTCTTTTGAGTGCCACGGTTGGGTTGAAGAATTACGATGCATTTTATGATATGGTACCTACGGGAATCGATGGAGGTCCCATCTATCTAATTGGAGATGGAAATGTGACAACTGATTTGTCATCAAATTTGTG

Coding sequence (CDS)

ATGACGAAGGTTGACACTAGCAGAACATCTTCACTTCAAAATGTGACTCTGCAAGTGAATACAAAGGGTCATGTGCTTCATGCTTTCGTTAATAAAAGATACATTGGGTCGCAATGGAAGAGTAATGGCCAGAGTTTTGTGTTTGAGAAACCCATTAGAAACCCATTCTACTAA

Protein sequence

MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPIRNPFY
Homology
[Close]
BLAST of MELO3C035426 vs. NCBI nr
Match: XP_008437707.1 (PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo])

HSP 1 Score: 107.5 bits (267), Expect = 4.0e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 431 MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 482

[Close]
BLAST of MELO3C035426 vs. NCBI nr
Match: KAA0055105.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDTS TSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 476 MTKVDTSGTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 527

[Close]
BLAST of MELO3C035426 vs. NCBI nr
Match: KAA0055108.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDTS TSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 476 MTKVDTSGTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 527

[Close]
BLAST of MELO3C035426 vs. NCBI nr
Match: XP_008437703.1 (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 1.7e-18
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDT+ TS LQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 475 MTKVDTNETSLLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 526

[Close]
BLAST of MELO3C035426 vs. NCBI nr
Match: KAA0055125.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa] >TYK20734.1 beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 2.9e-18
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDT+ TS LQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 475 MTKVDTNGTSLLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 526

[Close]
BLAST of MELO3C035426 vs. ExPASy TrEMBL
Match: A0A1S3AUN1 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483052 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 431 MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 482

[Close]
BLAST of MELO3C035426 vs. ExPASy TrEMBL
Match: A0A5A7UJD2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00340 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDTS TSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 476 MTKVDTSGTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 527

[Close]
BLAST of MELO3C035426 vs. ExPASy TrEMBL
Match: A0A5A7UN87 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00310 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDTS TSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 476 MTKVDTSGTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 527

[Close]
BLAST of MELO3C035426 vs. ExPASy TrEMBL
Match: A0A1S3AV92 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483048 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-19
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDT+ TS LQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 475 MTKVDTNETSLLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 526

[Close]
BLAST of MELO3C035426 vs. ExPASy TrEMBL
Match: A0A5A7UNA7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001360 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 1   MTKVDTSRTSSLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 53
           MTKVDT+ TS LQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI
Sbjct: 475 MTKVDTNGTSLLQNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQSFVFEKPI 526

[Close]
BLAST of MELO3C035426 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 )

HSP 1 Score: 42.4 bits (98), Expect = 1.5e-04
Identity = 20/57 (35.09%), Postives = 39/57 (68.42%), Query Frame = 0 

Query: 1   MTKVDTSRTSSL--QNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQ-SFVFEKPIRN 55
           MT++   +   L  +N+TL+V++  HVLHA+VN +Y+G+Q+  +G+  + FE+ + +
Sbjct: 476 MTRLHLDKKDPLWSRNMTLRVHSNAHVLHAYVNGKYVGNQFVKDGKFDYRFERKVNH 532

[Close]
BLAST of MELO3C035426 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 )

HSP 1 Score: 40.4 bits (93), Expect = 5.6e-04
Identity = 20/45 (44.44%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 13  QNVTLQVNTKGHVLHAFVNKRYIGSQWKSNGQ-SFVFEKPIR-NP 56
           +N++L++N+  HVLHAFVN ++IG+    NG+  +VFE+  + NP
Sbjct: 511 KNMSLRINSTAHVLHAFVNGQHIGNYRVENGKFHYVFEQDAKFNP 555

The following BLAST results are available for this feature:
BLAST of MELO3C035426 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008437707.14.0e-20100.00PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo][more]
KAA0055105.12.6e-1998.08beta-galactosidase 7-like [Cucumis melo var. makuwa][more]
KAA0055108.12.6e-1998.08beta-galactosidase 7-like [Cucumis melo var. makuwa][more]
XP_008437703.11.7e-1894.23PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo][more]
KAA0055125.12.9e-1894.23beta-galactosidase 7-like [Cucumis melo var. makuwa] >TYK20734.1 beta-galactosid... [more]
BLAST of MELO3C035426 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035426 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AUN11.9e-20100.00Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483052 PE=3 SV=1[more]
A0A5A7UJD21.2e-1998.08Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G0... [more]
A0A5A7UN871.2e-1998.08Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G0... [more]
A0A1S3AV928.1e-1994.23Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103483048 PE=3 SV=1[more]
A0A5A7UNA71.4e-1894.23Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G0... [more]
BLAST of MELO3C035426 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G20710.11.5e-0435.09beta-galactosidase 7 [more]
AT1G31740.15.6e-0444.44beta-galactosidase 15 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035426.1MELO3C035426.1mRNA