MELO3C035305 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035305
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Plant transposase
Location	chr12: 12147748 .. 12148682 (+)
RNA-Seq Expression	MELO3C035305
Synteny	MELO3C035305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAGCACACTAAACAAACTAAGGTTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCGCTGATCGTAGTCATGTAAGAGAATTTGGGTTTGATGTGACTCGTTTAAAACCATCTCTTTTGTCTAAAAAAGATCACAAGTATAAGGTTCTTGAAAAAGAATATTTGAAGATGAAAGAAGAAATGATAGAAATGAAAGAAATGAAAGACGAAATGATATAAATGAAAGTACTTATGTCATCTTATTTAAAAAAACATGTATTTTTTTTATTTTACTAACTTAGATTTTTTTTTTTTTTTTTTTTTTTTTGTAGTAGTAGTTAGCTATATTTTTGGTTTCATGTGAGATTATCATAGGTTAAACCAAGTGAGAAACTTTAAAATGCTACTGCAAGTGTGCTTAAGCGACTAAATATTCTTCCAACTTGTCCAATATCCTCACCATTGGTAAATTTATTTGTAATAGGACGAAAATTCTAGTATCTCATATTTTTCTTTTGACAAAGTATCAATCACAATAGTTAAATTAAGTGCAAGTTATTAGATTGGTATGGGTCGGGAGAGACTGTTGTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTGGTTCATCATGTTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACACATATTTATGGAGGCCAACATTAGATATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGCATGACCATCTGAAAAAGTGATCATTGGTATGTTGTCTAATTCTAATCTTTTTTGTCTACATTTATTAAAGATTTTCTACTTGTTTAATTAATATCCATTATTATTGGTGTCTACAAAATCATAAATTGATATATGTTTTATAAATTTATGTAGGTGAATGAAATGGAATCTT

mRNA sequence

AGGAGCACACTAAACAAACTAAGGTTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCGCTGATCGTAGTCATGTAAGAGAATTTGGGTTTGATGTGACTCGTTTAAAACCATCTCTTTTGTCTAAAAAAGATCACAAGTATAAGATGAAAGAAGAAATGATAGAAATGAAAGAAATGAAAGACGAAATGATATAAATGAAAGTACTTATGTCATCTTATTTAAAAAAACATAGTATCAATCACAATAGTTAAATTAAGTGCAAGTTATTAGATTGGTATGGGTCGGGAGAGACTGTTGTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTGGTTCATCATGTTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACACATATTTATGGAGGCCAACATTAGATATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGCATGACCATCTGAAAAAGTGAATGAAATGGAATCTT

Coding sequence (CDS)

GAGCACACTAAACAAACTAAGGTTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCGCTGATCGTAGTCATGTAAGAGAATTTGGGTTTGATGTGACTCGTTTAAAACCATCTCTTTTGTCTAAAAAAGATCACAAGTATAAGATGAAAGAAGAAATGATAGAAATGAAAGAAATGAAAGACGAAATGATATAA

Protein sequence

EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKYKMKEEMIEMKEMKDEMI

Homology

[Close]

BLAST of MELO3C035305 vs. NCBI nr
Match: KAA0038958.1 (uncharacterized protein E6C27_scaffold84G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 6.1e-18
Identity = 58/80 (72.50%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1    EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
            E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTRLK SLLS +DHKY     
Sbjct: 1160 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRLKLSLLSHQDHKYKVLEK 1219

Query: 61   ---KMKEEMIEMKEMKDEMI 73
               KMKEEM+EMK MKDEMI
Sbjct: 1220 EYLKMKEEMVEMKTMKDEMI 1239

[Close]

BLAST of MELO3C035305 vs. NCBI nr
Match: TYK13531.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-17
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1   EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
           E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS++DHKY     
Sbjct: 610 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 669

Query: 61  ---KMKEEMIEMKEMKDEMI 73
              KMKEEM+EMK MKDEMI
Sbjct: 670 EYLKMKEEMVEMKTMKDEMI 689

[Close]

BLAST of MELO3C035305 vs. NCBI nr
Match: KAA0038435.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-17
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1   EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
           E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS++DHKY     
Sbjct: 119 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 61  ---KMKEEMIEMKEMKDEMI 73
              KMKEEM+EMK MKDEMI
Sbjct: 179 EYLKMKEEMVEMKTMKDEMI 198

[Close]

BLAST of MELO3C035305 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-17
Identity = 57/80 (71.25%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1    EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
            E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS +DHKY     
Sbjct: 1123 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEK 1182

Query: 61   ---KMKEEMIEMKEMKDEMI 73
               KMKEEM+EMK MKDEMI
Sbjct: 1183 EYLKMKEEMVEMKTMKDEMI 1202

[Close]

BLAST of MELO3C035305 vs. NCBI nr
Match: KAA0040964.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-17
Identity = 57/80 (71.25%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
           E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS +DHKY     
Sbjct: 597 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEK 656

Query: 61  ---KMKEEMIEMKEMKDEMI 73
              KMKEEM+EMK MKDEMI
Sbjct: 657 EYLKMKEEMVEMKTMKDEMI 676

[Close]

BLAST of MELO3C035305 vs. ExPASy TrEMBL
Match: A0A5A7T7V4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00340 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-18
Identity = 58/80 (72.50%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1    EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
            E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTRLK SLLS +DHKY     
Sbjct: 1160 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRLKLSLLSHQDHKYKVLEK 1219

Query: 61   ---KMKEEMIEMKEMKDEMI 73
               KMKEEM+EMK MKDEMI
Sbjct: 1220 EYLKMKEEMVEMKTMKDEMI 1239

[Close]

BLAST of MELO3C035305 vs. ExPASy TrEMBL
Match: A0A5D3CNY4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00040 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.7e-18
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1   EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
           E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS++DHKY     
Sbjct: 610 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 669

Query: 61  ---KMKEEMIEMKEMKDEMI 73
              KMKEEM+EMK MKDEMI
Sbjct: 670 EYLKMKEEMVEMKTMKDEMI 689

[Close]

BLAST of MELO3C035305 vs. ExPASy TrEMBL
Match: A0A5A7TAN8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003350 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.7e-18
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1   EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
           E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS++DHKY     
Sbjct: 119 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEK 178

Query: 61  ---KMKEEMIEMKEMKDEMI 73
              KMKEEM+EMK MKDEMI
Sbjct: 179 EYLKMKEEMVEMKTMKDEMI 198

[Close]

BLAST of MELO3C035305 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 57/80 (71.25%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1    EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
            E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS +DHKY     
Sbjct: 1123 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEK 1182

Query: 61   ---KMKEEMIEMKEMKDEMI 73
               KMKEEM+EMK MKDEMI
Sbjct: 1183 EYLKMKEEMVEMKTMKDEMI 1202

[Close]

BLAST of MELO3C035305 vs. ExPASy TrEMBL
Match: A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 57/80 (71.25%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1    EHTKQTKVETTVSTTNVVDDALSKVLGADRSHVREFGFDVTRLKPSLLSKKDHKY----- 60
            E  +QT+ ETTVSTTNVVDDALSKVLG DR HVR FGF VTR K SLLS +DHKY     
Sbjct: 1160 ERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEK 1219

Query: 61   ---KMKEEMIEMKEMKDEMI 73
               KMKEEM+EMK MKDEMI
Sbjct: 1220 EYLKMKEEMVEMKTMKDEMI 1239

The following BLAST results are available for this feature:

BLAST of MELO3C035305 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035305 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038958.1	6.1e-18	72.50	uncharacterized protein E6C27_scaffold84G00340 [Cucumis melo var. makuwa]	[more]
TYK13531.1	1.8e-17	71.25	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
KAA0038435.1	1.8e-17	71.25	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK07512.1	3.0e-17	71.25	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0040964.1	3.0e-17	71.25	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7V4	3.0e-18	72.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CNY4	8.7e-18	71.25	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TAN8	8.7e-18	71.25	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00...	[more]
A0A5D3DCM2	1.5e-17	71.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T672	1.5e-17	71.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C035305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035305.1	MELO3C035305.1	mRNA