MELO3C035236 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035236
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Major pollen allergen Ole e 6-like
Location	chr11: 30104163 .. 30105048 (+)
RNA-Seq Expression	MELO3C035236
Synteny	MELO3C035236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGGGAGCACTTTAATAGACGCTAAATCCAAAGTGATTTGTAAAAGCGTCACCAAAAGGCAAGTAAAAACCGACACAAAAAAGGAAAAAAAATAATAATGGCCAAGAAGATTATTGCAGTGTTTGTGATGTGCATTGTTGTAATGGCTTCTTTGCAATTTGGCAATGCCACCAATGAAGAAGAAGTTAAGAAATATGAGGCTAAATTTGATGTCAAATATGTGTCTTGTTTTGCAAATTGTATGAGGGTATGCCTTGCAAGGCTCGGTGGTCGAGGCTATTGTCAAGTTAAATGTGAAGAAGATTGCGAAGAAAAAGAAGTTGCTGGTACTACTCTCTCTTTTTTCTCTCTCTCTTTATATATTTTTTCTAATATCTAGATGTTCGATTATTTATGACAAATCACAAAAGTCGGTCATGATACATGATAGCGTAGTTACAAAATTATACAAAAGTGTTAAATTTGAACATACAAATTTATAGAAGTTGAACTCTATTTAAGAAGTCAATATTTATAGTTGAAAGTTTGAAGATGTAAATCGCAACAACCATCATGTTTTAGTGATTGTATTTTTTCAACCGTATATTTTGTGATCATTTCCATATCCCATCTATATTTTTTAAAACCTCATTCTATTAGGAGTTGAATTTTATTTTCTTATATTAATTTTGAATTGTTTGTATGATTGTTTTACAGATAAGTTGAACATCCCATTGCACTGAATAACATAATGGGGGAATTAAAGGATAAAAGTGCTTCCTATCATGGAGGATCAATGAGAGCATTCTTATTGTATTAAAATCAAAGGGAGTTTATGATAAACCCTCCTTTCTATACAATAATATGATTCCAAAATTTTTATTTATAATGAACTTCTTGCTTTAA

mRNA sequence

CAAGGGAGCACTTTAATAGACGCTAAATCCAAAGTGATTTGTAAAAGCGTCACCAAAAGGCAAGTAAAAACCGACACAAAAAAGGAAAAAAAATAATAATGGCCAAGAAGATTATTGCAGTGTTTGTGATGTGCATTGTTGTAATGGCTTCTTTGCAATTTGGCAATGCCACCAATGAAGAAGAAGTTAAGAAATATGAGGCTAAATTTGATGTCAAATATGTGTCTTGTTTTGCAAATTGTATGAGGGTATGCCTTGCAAGGCTCGGTGGTCGAGGCTATTGTCAAGTTAAATGTGAAGAAGATTGCGAAGAAAAAGAAGTTGCTGATAAGTTGAACATCCCATTGCACTGAATAACATAATGGGGGAATTAAAGGATAAAAGTGCTTCCTATCATGGAGGATCAATGAGAGCATTCTTATTGTATTAAAATCAAAGGGAGTTTATGATAAACCCTCCTTTCTATACAATAATATGATTCCAAAATTTTTATTTATAATGAACTTCTTGCTTTAA

Coding sequence (CDS)

ATGGCCAAGAAGATTATTGCAGTGTTTGTGATGTGCATTGTTGTAATGGCTTCTTTGCAATTTGGCAATGCCACCAATGAAGAAGAAGTTAAGAAATATGAGGCTAAATTTGATGTCAAATATGTGTCTTGTTTTGCAAATTGTATGAGGGTATGCCTTGCAAGGCTCGGTGGTCGAGGCTATTGTCAAGTTAAATGTGAAGAAGATTGCGAAGAAAAAGAAGTTGCTGATAAGTTGAACATCCCATTGCACTGA

Protein sequence

MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRGYCQVKCEEDCEEKEVADKLNIPLH

Homology

[Close]

BLAST of MELO3C035236 vs. NCBI nr
Match: KAA0039794.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYK24703.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 2.3e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG
Sbjct: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YCQVKCEEDCEEKEVADKLNIPLH
Sbjct: 61 YCQVKCEEDCEEKEVADKLNIPLH 84

[Close]

BLAST of MELO3C035236 vs. NCBI nr
Match: XP_004140523.2 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN46485.1 hypothetical protein Csa_005747 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKKI+AVF MCIVVMASLQFGNATN EEVKKYEAK++ KYVSC+ NC+R+CLARL GRG
Sbjct: 1  MAKKIVAVFFMCIVVMASLQFGNATN-EEVKKYEAKYEAKYVSCYENCLRICLARLSGRG 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPL 84
          YC+VKC+EDCEEKEVA+KL+I +
Sbjct: 61 YCEVKCDEDCEEKEVAEKLHIQI 82

[Close]

BLAST of MELO3C035236 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 6.7e-24
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKK+IA+F+MCIVV+A+LQF +A  E+EV KYEAKFD KY SCF  C + CL    G+ 
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YC+VKC+EDC EKEVADKL+I LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of MELO3C035236 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 117.5 bits (293), Expect = 5.7e-23
Identity = 55/84 (65.48%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKK++AVF+MCIVV+A+LQF  A NE+EV KYEAKFD KY SC+  C + CLA   G+ 
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATA-NEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQS 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          +C+VKC+EDC+EKEVADKL+I LH
Sbjct: 61 FCEVKCDEDCDEKEVADKLHIKLH 83

[Close]

BLAST of MELO3C035236 vs. NCBI nr
Match: XP_004146471.1 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein Csa_005859 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-22
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MA K+IA+F+MCIVV+A+LQF NA N+E+V KYEAKFD KY SCF  C + CL    G+ 
Sbjct: 1  MANKMIALFLMCIVVVAALQFANA-NKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YC+VKC+EDC+EKE ADKL+I LH
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of MELO3C035236 vs. ExPASy TrEMBL
Match: A0A5D3DM34 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002600 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG
Sbjct: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YCQVKCEEDCEEKEVADKLNIPLH
Sbjct: 61 YCQVKCEEDCEEKEVADKLNIPLH 84

[Close]

BLAST of MELO3C035236 vs. ExPASy TrEMBL
Match: A0A0A0K9T2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101980 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKKI+AVF MCIVVMASLQFGNATN EEVKKYEAK++ KYVSC+ NC+R+CLARL GRG
Sbjct: 1  MAKKIVAVFFMCIVVMASLQFGNATN-EEVKKYEAKYEAKYVSCYENCLRICLARLSGRG 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPL 84
          YC+VKC+EDCEEKEVA+KL+I +
Sbjct: 61 YCEVKCDEDCEEKEVAEKLHIQI 82

[Close]

BLAST of MELO3C035236 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-24
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKK+IA+F+MCIVV+A+LQF +A  E+EV KYEAKFD KY SCF  C + CL    G+ 
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YC+VKC+EDC EKEVADKL+I LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of MELO3C035236 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-24
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MAKK+IA+F+MCIVV+A+LQF +A  E+EV KYEAKFD KY SCF  C + CL    G+ 
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YC+VKC+EDC EKEVADKL+I LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of MELO3C035236 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.8e-22
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60
          MA K+IA+F+MCIVV+A+LQF NA N+E+V KYEAKFD KY SCF  C + CL    G+ 
Sbjct: 1  MANKMIALFLMCIVVVAALQFANA-NKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 YCQVKCEEDCEEKEVADKLNIPLH 85
          YC+VKC+EDC+EKE ADKL+I LH
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIELH 83

The following BLAST results are available for this feature:

BLAST of MELO3C035236 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035236 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039794.1	2.3e-40	100.00	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYK24703.1 major ...	[more]
XP_004140523.2	2.1e-30	79.52	major pollen allergen Ole e 6 [Cucumis sativus] >KGN46485.1 hypothetical protein...	[more]
XP_008456958.1	6.7e-24	65.48	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_038891517.1	5.7e-23	65.48	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_004146471.1	3.7e-22	64.29	major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein...	[more]

BLAST of MELO3C035236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DM34	1.1e-40	100.00	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0K9T2	1.0e-30	79.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101980 PE=4 SV=1	[more]
A0A5D3BCS2	3.2e-24	65.48	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	3.2e-24	65.48	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A0A0KPA7	1.8e-22	64.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]

BLAST of MELO3C035236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 38..82 e-value: 2.7E-10 score: 41.6
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 39..79
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 44..80 e-value: 4.9E-7 score: 29.6
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..83
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035236.1	MELO3C035236.1	mRNA