MELO3C034792 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034792
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Plant transposase
Location	chr11: 17768901 .. 17769737 (+)
RNA-Seq Expression	MELO3C034792
Synteny	MELO3C034792

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTCTGAAATATTGTGTTTATATATTGTTGTTTGCTAGGAGCGCATTGAACAAACTGAGGTTGAGACGACAATTTCAACAACAAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCTCTGATCGTGGTCATGTAAGAGGATTTGGATTTGGAGTGACTCGTTCAAACTATCTCTTTTGTCTCAACAAGATTACAAGTATAAGGTTCTTAAAAAAGAATATTTGAAGGTGAAGGAAGAAATGATAGAAATGAAAGCAATGAAAGACGAAATGATAGGAATGAAAGCACTTGTGTCATCTTATTTAAAGAAACATGTTTTTTTTTCTTTATTACTTAGATTTTTTTTCTGTTAGTAGTTAACTATATTTTTTATTTCTGTTAGTAGTTAACTATATTTTTTTATTTCATATGAGATTATCATAGGTTGAACCAAGGGAGGAACTTTCAAATACTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAACTGGTCCAATGTTTTCTCCATTAGTAAATTTATGTGTAATATGATGAAAATTGTTTATGATGCCATTATTGTCTTATTCTAGTATCTCATATTTGACTTTGACAGGTATCAATAAACTAGTCAAATTAGGTGCAAGTTATTAGATTGGTATGACTCGCGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTAGTTCATCATGTTTCTATTGGTCCACATGCGATTAGAGTATGGGTTGATATAGCAAAGAAAACGAACGCATTTTGTGGAGGCCAACATAAAAAATGACATGTACTTAAGAAGTTTCGGACTATCACAGTTGCATGA

mRNA sequence

TGCTCTGAAATATTGTGTTTATATATTGTTGTTTGCTAGGAGCGCATTGAACAAACTGAGGTTGAGACGACAATTTCAACAACAAATGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCTCTGATCGTGGTCATGTAAGAGGATTTGGATTTGGAGTGACTCGTTCAAACTATCTCTTTTGTCTCAACAAGATTACAAGTATAAGGTTCTTAAAAAAGAATATTTGAAGGTGAAGGAAGAAATGAGTATCAATAAACTAGTCAAATTAGGTGCAAGTTATTAGATTGGTATGACTCGCGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTAGTTCATCATGTTTCTATTGGTCCACATGCGATTAGAGTATGGGTTGATATAGCCAACATAAAAAATGACATGTACTTAAGAAGTTTCGGACTATCACAGTTGCATGA

Coding sequence (CDS)

ATGACTCGCGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTAGTTCATCATGTTTCTATTGGTCCACATGCGATTAGAGTATGGGTTGATATAGCCAACATAAAAAATGACATGTACTTAAGAAGTTTCGGACTATCACAGTTGCAT

Protein sequence

MTRGEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKNDMYLRSFGLSQLH

Homology

[Close]

BLAST of MELO3C034792 vs. NCBI nr
Match: KAA0036852.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 3.3e-11
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKN 43
           GEIVAEGRWSSNDPTTLVHHV IGPHAIRVWVD+A   N
Sbjct: 745 GEIVAEGRWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPN 783

[Close]

BLAST of MELO3C034792 vs. NCBI nr
Match: TYJ95916.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 3.3e-11
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKN 43
           GEIVAEGRWSSNDPTTLVHHV IGPHAIRVWVD+A   N
Sbjct: 140 GEIVAEGRWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPN 178

[Close]

BLAST of MELO3C034792 vs. NCBI nr
Match: KAA0066537.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 5.6e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKND 44
           GEIVAEGRWSSNDPT LVHHV IGPHAIRVWVD+A   N+
Sbjct: 257 GEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVDVAKKPNE 296

[Close]

BLAST of MELO3C034792 vs. NCBI nr
Match: XP_016903678.1 (PREDICTED: uncharacterized protein LOC107992334 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKNDMYL 47
           GEIV EGRWSSNDPT LVHHV IGPHAIRVWVD+A  K++ YL
Sbjct: 100 GEIVTEGRWSSNDPTALVHHVPIGPHAIRVWVDVAK-KSNAYL 141

[Close]

BLAST of MELO3C034792 vs. NCBI nr
Match: KAA0051056.1 (uncharacterized protein E6C27_scaffold678G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKNDMYL 47
           GEIV EGRWSSNDPT LVHHV IGPHAIRVWVD+A  K++ YL
Sbjct: 100 GEIVTEGRWSSNDPTALVHHVPIGPHAIRVWVDVAK-KSNAYL 141

[Close]

BLAST of MELO3C034792 vs. ExPASy TrEMBL
Match: A0A5A7T097 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001590 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKN 43
           GEIVAEGRWSSNDPTTLVHHV IGPHAIRVWVD+A   N
Sbjct: 745 GEIVAEGRWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPN 783

[Close]

BLAST of MELO3C034792 vs. ExPASy TrEMBL
Match: A0A5D3BAJ3 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002260 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKN 43
           GEIVAEGRWSSNDPTTLVHHV IGPHAIRVWVD+A   N
Sbjct: 140 GEIVAEGRWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPN 178

[Close]

BLAST of MELO3C034792 vs. ExPASy TrEMBL
Match: A0A5A7VHH9 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00970 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-11
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKND 44
           GEIVAEGRWSSNDPT LVHHV IGPHAIRVWVD+A   N+
Sbjct: 257 GEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVDVAKKPNE 296

[Close]

BLAST of MELO3C034792 vs. ExPASy TrEMBL
Match: A0A5D3DLF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001200 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 4    GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKN 43
            GEIVAEGRWSSNDPT LVHHV IGPHAIRVWVD+A   N
Sbjct: 1326 GEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVDVAKKPN 1364

[Close]

BLAST of MELO3C034792 vs. ExPASy TrEMBL
Match: A0A5A7UA33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00100 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 4   GEIVAEGRWSSNDPTTLVHHVSIGPHAIRVWVDIANIKNDMYL 47
           GEIV EGRWSSNDPT LVHHV IGPHAIRVWVD+A  K++ YL
Sbjct: 100 GEIVTEGRWSSNDPTALVHHVPIGPHAIRVWVDVAK-KSNAYL 141

The following BLAST results are available for this feature:

BLAST of MELO3C034792 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C034792 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036852.1	3.3e-11	87.18	Plant transposase [Cucumis melo var. makuwa]	[more]
TYJ95916.1	3.3e-11	87.18	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0066537.1	5.6e-11	82.50	Plant transposase [Cucumis melo var. makuwa]	[more]
XP_016903678.1	1.2e-10	79.07	PREDICTED: uncharacterized protein LOC107992334 [Cucumis melo]	[more]
KAA0051056.1	1.2e-10	79.07	uncharacterized protein E6C27_scaffold678G00100 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034792 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T097	1.6e-11	87.18	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001...	[more]
A0A5D3BAJ3	1.6e-11	87.18	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00...	[more]
A0A5A7VHH9	2.7e-11	82.50	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G009...	[more]
A0A5D3DLF1	6.0e-11	84.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UA33	6.0e-11	79.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C034792 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034792.1	MELO3C034792.1	mRNA