MELO3C034762 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034762
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr06: 18613651 .. 18614329 (-)
RNA-Seq Expression	MELO3C034762
Synteny	MELO3C034762

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGTGCTAACTATCCTACAGTTATGGTAGCCTTTGTAGTTTAAAGTTAGTTTTAGTGAAAATTTTGAGAAATTGTATATTGATGGAGAGGAGAGGAATATGTTTATAATCAAACCTATTTATGTTTTAGGGACTTAAACGATGGACAAGGATTGGATGAAACTTAAGAATAAGTTTTCCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGCCAAGTTTTACGTTGATGCCTACAGATGAATAAGGTGTCCATGCAAGAGATGTATGAATTTAAATTGAAACTCACTAGAGGGTGTGGAGCGACAGTTATTGATTATTGGAATATCCCTCTACTACATAGAATGGGTGTATCATGGAGAGTCATTGAGCTTCAGTGGTACAAAAAACTTTGAGGAAGGAACTAGTAGTAACCCTTTTGATGAAGGAACTAGTAGTAGGCAGTTTAATGAAGAAGATGATATGTTTAGTATGATGAATGATTTACAAGCCCCGATTGAACATGAAGAGGAAACAGAGGAACTTCGTTTGAAAGATGAAATGACGAGGAATATTGGGGTAGATATAGATGAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCACGGTTGTTCTGAATTTTCGTCCTTCAATTTTTTGGTTAAGTTGA

mRNA sequence

GTTGTGCTAACTATCCTACAGTTATGGGACTTAAACGATGGACAAGGATTGGATGAAACTTAAGAATAAGTTTTCCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGCCAAGTTTTACGTTGATGCCTACAGATGAATAAGGTGTCCATGCAAGAGATGTATGAATTTAAATTGAAACTCACTAGAGGGTGTGGAGCGACAGTTATTGATTATTGGAATATCCCTCTACTACATAGAATGGGTGTATCATGGAGAGTCATTGAGCTTCAGTGGTACAAAAAACTTTGAGGAAGGAACTAGTAGTAACCCTTTTGATGAAGGAACTAGTAGTAGGCAGTTTAATGAAGAAGATGATATGTTTAGTATGATGAATGATTTACAAGCCCCGATTGAACATGAAGAGGAAACAGAGGAACTTCGTTTGAAAGATGAAATGACGAGGAATATTGGGGTAGATATAGATGAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCACGGTTGTTCTGAATTTTCGTCCTTCAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGTTTAGTATGATGAATGATTTACAAGCCCCGATTGAACATGAAGAGGAAACAGAGGAACTTCGTTTGAAAGATGAAATGACGAGGAATATTGGGGTAGATATAGATGAAGATACAACAAACATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCACGGTTGTTCTGAATTTTCGTCCTTCAATTTTTTGGTTAAGTTG

Protein sequence

MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSEFSSFNFLVKL

Homology

[Close]

BLAST of MELO3C034762 vs. NCBI nr
Match: TYK11649.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.2e-28
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSE 60
           MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIF+DLLNEA NELYHGC E
Sbjct: 801 MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFKDLLNEACNELYHGCFE 860

Query: 61  FSSFNFLVKL 71
           FSSFNFLVKL
Sbjct: 861 FSSFNFLVKL 870

[Close]

BLAST of MELO3C034762 vs. NCBI nr
Match: KAA0063387.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.2e-28
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSE 60
           MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIF+DLLNEA NELYHGC E
Sbjct: 735 MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFKDLLNEACNELYHGCFE 794

Query: 61  FSSFNFLVKL 71
           FSSFNFLVKL
Sbjct: 795 FSSFNFLVKL 804

[Close]

BLAST of MELO3C034762 vs. NCBI nr
Match: TYK16767.1 (transposon protein, putative, CACTA, En/Spm sub-class, expressed [Cucumis melo var. makuwa])

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-22
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSE 60
          MF M+NDL+APIE EEE EE RL+DEM+RNIGVD+DEDTTNIFQDLLNE RN+LY GCSE
Sbjct: 30 MFGMLNDLEAPIEQEEEIEEGRLEDEMSRNIGVDLDEDTTNIFQDLLNETRNKLYPGCSE 89

Query: 61 FSSFNFLVKL 71
          F S NFLVKL
Sbjct: 90 FFSLNFLVKL 99

[Close]

BLAST of MELO3C034762 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-22
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTT-NIFQDLLNEARNELYHGCS 60
           +F M+NDLQAPIEHEEE EE RL+DEM  N+GV+IDEDTT NIFQDLLN+ARNELY GCS
Sbjct: 184 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCS 243

Query: 61  EFSSFNFLVKL 71
           EFSS NFLVKL
Sbjct: 244 EFSSLNFLVKL 254

[Close]

BLAST of MELO3C034762 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-22
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTT-NIFQDLLNEARNELYHGCS 60
           +F M+NDLQAPIEHEEE EE RL+DEM  N+GV+IDEDTT NIFQDLLN+ARNELY GCS
Sbjct: 110 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCS 169

Query: 61  EFSSFNFLVKL 71
           EFSS NFLVKL
Sbjct: 170 EFSSLNFLVKL 180

[Close]

BLAST of MELO3C034762 vs. ExPASy TrEMBL
Match: A0A5D3CN32 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00140 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSE 60
           MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIF+DLLNEA NELYHGC E
Sbjct: 801 MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFKDLLNEACNELYHGCFE 860

Query: 61  FSSFNFLVKL 71
           FSSFNFLVKL
Sbjct: 861 FSSFNFLVKL 870

[Close]

BLAST of MELO3C034762 vs. ExPASy TrEMBL
Match: A0A5A7V8R2 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold508G00160 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSE 60
           MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIF+DLLNEA NELYHGC E
Sbjct: 735 MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFKDLLNEACNELYHGCFE 794

Query: 61  FSSFNFLVKL 71
           FSSFNFLVKL
Sbjct: 795 FSSFNFLVKL 804

[Close]

BLAST of MELO3C034762 vs. ExPASy TrEMBL
Match: A0A5D3CY95 (Transposon protein, putative, CACTA, En/Spm sub-class, expressed OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00220 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTTNIFQDLLNEARNELYHGCSE 60
          MF M+NDL+APIE EEE EE RL+DEM+RNIGVD+DEDTTNIFQDLLNE RN+LY GCSE
Sbjct: 30 MFGMLNDLEAPIEQEEEIEEGRLEDEMSRNIGVDLDEDTTNIFQDLLNETRNKLYPGCSE 89

Query: 61 FSSFNFLVKL 71
          F S NFLVKL
Sbjct: 90 FFSLNFLVKL 99

[Close]

BLAST of MELO3C034762 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTT-NIFQDLLNEARNELYHGCS 60
           +F M+NDLQAPIEHEEE EE RL+DEM  N+GV+IDEDTT NIFQDLLN+ARNELY GCS
Sbjct: 184 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCS 243

Query: 61  EFSSFNFLVKL 71
           EFSS NFLVKL
Sbjct: 244 EFSSLNFLVKL 254

[Close]

BLAST of MELO3C034762 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1   MFSMMNDLQAPIEHEEETEELRLKDEMTRNIGVDIDEDTT-NIFQDLLNEARNELYHGCS 60
           +F M+NDLQAPIEHEEE EE RL+DEM  N+GV+IDEDTT NIFQDLLN+ARNELY GCS
Sbjct: 110 IFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCS 169

Query: 61  EFSSFNFLVKL 71
           EFSS NFLVKL
Sbjct: 170 EFSSLNFLVKL 180

The following BLAST results are available for this feature:

BLAST of MELO3C034762 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11649.1	2.2e-28	95.71	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0063387.1	2.2e-28	95.71	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK16767.1	4.0e-22	80.00	transposon protein, putative, CACTA, En/Spm sub-class, expressed [Cucumis melo v...	[more]
TYK18968.1	5.2e-22	80.28	uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa]	[more]
KAA0056368.1	5.2e-22	80.28	uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034762 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034762 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CN32	1.1e-28	95.71	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7V8R2	1.1e-28	95.71	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CY95	1.9e-22	80.00	Transposon protein, putative, CACTA, En/Spm sub-class, expressed OS=Cucumis melo...	[more]
A0A5D3D5X7	2.5e-22	80.28	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7UMP4	2.5e-22	80.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C034762 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034762.1	MELO3C034762.1	mRNA