MELO3C034741 (gene) Melon (DHL92) v4

Overview
NameMELO3C034741
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPol protein
Locationchr11: 4702157 .. 4705632 (-)
RNA-Seq ExpressionMELO3C034741
SyntenyMELO3C034741
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATTGAAACACTTGTAAACCCTTCCATCTCTTCTCCTTCATTTTTCTTCTTCAGGCCACCGCCCCCACTCTTCTCTTCTTCTCTGTTCAACTCCGATAATCTTATCCATTCAGCATCCCCCAAGCATGTGTCCTTTGTTGAGTTCTGGTCAGCGTCGTTCACCGTAGCTCCATCTCCAATTCTCATTCGTGAAGTCTCATCTGCCCGAGGTTTTCCACCCTTCGTCCGTTGTGCCTCTGCATCGTTGAAGCCCAGCCGTTCACTGTCACTCCTTCTCCGCCCTTCGTCCGTTTCGTCAGCATGAAACCCAGCCACTGTCGCCACGTACCACACCCGAGTCGTTTCCTCCATCTTCTAGTCGTGCGCCACACTTGCGCTAGCCTTCCCTCTTCACTTGAGTCGTTTCCCTCGCCTAAGTCATGTTCGAGCTGATTTCTTTGTTACCCGAGCTGAGTAAGCTATTTTCTTCCAAGCTAAGCCGTCAATGGATGTAAGTTTTGAGCTTGTAGTTGTTTTCATGAATATTATAAGTGCTATTGTTGGATTAATTAATTTGGGGTTATCATTAGATCCTTGACGACATTGGAACTCGAGTTCTTGGACTATTATATGTAGTTAGAAAGTAGTGATGATTTACACTATTTACTGAATAGATGGTTTGACTATTAAGTGTAGCCTAGATATATTGATAGATCGTACTGTTGACTAAATTGAGATGGTTAGACTATTATGTGTAGCTTAGATATGTTGATGGACTGTACGGTTGACTAAACTTAGATATTTTGACTAGTTATGCGTAAAGAATGAATTGTTAGTTTTACATGTATTTTGATGTGACTGTCATAGACAGTTTAAAATGGACTGAGGGGTAACGTTAGCTTTATCTATGGGGTAGTGTGCCTTGTAGGCACGCTGTCCTACGGGATCACCACATGTTGTTCATCATTTGGGATCACTAGACTGATATGTGTATCATACAAGAGCACTAAACTAATATGTGTATCCTACGAGATCACTAGATTGTAATGTGTATCCTACGGGGTCACTAGACTGATATGTATATCTTATAGGATTACTAGACTAGTGTGTGCATCCTACGGGATCACTAGATTGATGTGTGCACCCAATGGAATCACTAGACTGTTATGTTATAGGGTACCTCCTAATAGGAAGCTAACTATTCTTACCCTTAATGGGACCAGTAGTAATTCTCTTACTGGTTATATTTTATACTCACCCTTTTATGTTTAACTTTTTCAGGCAAAGGTAATGTGCAGGAAGACCGACGAGGGGTAAGAAGGACTCGTGATAACCATATGGGAACGTTTTTATTTCAATTACTTCCGCTTAATGTTTTTATTTTTTATTTTTTTGTTTTGTGGATTGAAAATGAGTCATGCTTAAGACATCTACTTGTTTTTTATGGTTTTATAAACGATGTTGTGAACTTTTAAATTTGTTTGAAATAGGGCCCAAAGACAGTTTTTCTTTTTTTTCTTTTTTGGATGTTTACTTGATTTTAGACAGATTTTTATGAATTTTTATGTTTAGATGAATTTTCTTAGTATTATAGCAATGCCCTCAGCTTAGTTTGAAAAGTTGAGCCGTTACATTGTATTTCCTTGATTTTTTCCAATGTAGGATTTCTCAATTATTGTTAAGCAGCTTATTTGATTACCATCAAATTTTATTTTATATGATTGTTACATGTCCAACTTTTTTTTTCTTTTGCAAGAACTTTCACATCTTTTTTTTTATTTTTTGCTAATTAATAATCAATTTAGATTTGTCAATGTTAGCAAGTATAATTTAAAGGTTATCACCCCAGAATCATTAATAATCTTATTTTATCTCCATTACAGTTATGAAAATTCTACTTTAAGAATGGTTTAATAGGTACGGTTAAGTTAAGTTGGTAAATTAATAGTTATTATCTAGGAAGTTAGATTATCTGTGTGAGACTCGTACCAAAGAAAGACTAAAATTTGACTAAGTATTATAGAGAAGGCATTTTGACATTGGCTAGGCAATAAGAAGCAGGTGTTTGAAGTTTATTGTGAGACAAGGAGTTAGACAACGAAACCTTAGAACGCAGCTGAGTTTTTCCAAAGGTTGAAGACTCGATGATAATAAGTAAGGAAATTTTTGGGAATTTTCCTAAGGATATACTTAATGGGCCACGTATAGAAGTTTAAGCTAAGGATGGTTAAATTGAACACTAAGCTTCCACGTGCACCACTAAGAGTAGGAGCTGACAAACTATTAAGAGTTTTGGGATGACTAACCCATTTATAGACTAGTATAAATAGGGGCTAAGTAAGATCATTCAAGAGTTTGTTGCTGAAATTCTGAAAAAAAATAAAAAATAATAAAAAACCAAGTACTTGAGCTGCTATTGAAGGTCTACGTGAGAAGAGTAAGATTAGAAGCAAGCAAAGTTTAAGTTTCTAAGTTGTGTGAGTGTTTTTCTTCAAAGTATCACATATGTTTGAAAGATTTTCTTTAAAGTCTTGTTGATTTAAGATGATGAATCAATACAAATGTTTCCAAAGAAATTTATATAAAAAGTTCATGCTATGTTTCAAAGTATGTTTCATATGGTTCAAATAAATATAGAAATGTTGTTCAAACCATTAGTCTTCTTCCTACCTTTAGGCTAACTGTTATGTGTAATAAAGAGTAAAGGCAGTCATGTATAGAAGGCGTGCATGGTGGAATGAGACAGGACAATCATAAAAGATGTGTATTACGCTTCAACCTGAGCAATAAGGAATGAATCTGGATATTCTTGATGTCGTTGATGAGAAGTCCATCATAATAGTCTAAACGCCGGATGATGAGTCTTTGCATGGAGAATGATTCATGATCTCAATCAAAGGAATGCTAATTGACTAATGTGTGATTATGTAAAATTATATGTTTATGCGATAAAATATGTTTACGTGAAAAGAAGTGTTTAAGAGATTTGATGTGAACAAAAGATGTTTACAAAAGGTATTTCATGAAAATGTTTTTCTTAAAACCTCACTGAACCTTTTGACTTATGTTTTAAAGTACTTTTCCCCACGTTATCAGGCGTTAAGGCCAAAGTAAGGAAAGGGTGTGAAGCTTGCTAGGAAAGAAGAAGCTGTCGGGCATTTAATTTTGTGACTGATTTATTTGTCTTGTATTTGTGAGAGTTGTAAAGCTGGTTGTATAACATATATTTGACGTTAATAAAGTTTAAGTTCTATTACTTCTCTTGTGTTAAGTTCTTATAAAGCAAAGTTTATTTAGTTATAAGTAAGTCAAAAAAGTTACTAAGTTATTAAGCAAAGCTTAAGGACCATATGCGAGGCCCTAATCGCGTATCGCCCACACAATAGAGGCCAAATGACAAGGAATATGCATGAGGCCTTGACTCGGAGAAAGGAGGTCCGGGTGAAGAGAAGTATAGGACATCCCATAAGGAAGTATAAAAAGGGAGGAAGGTGA

mRNA sequence

CTCATTGAAACACTTGTAAACCCTTCCATCTCTTCTCCTTCATTTTTCTTCTTCAGGCCACCGCCCCCACTCTTCTCTTCTTCTCTGTTCAACTCCGATAATCTTATCCATTCAGCATCCCCCAAGCATGTGTCCTTTGTTGAGTTCTGGTCAGCGTCGTTCACCGTAGCTCCATCTCCAATTCTCATTCGTGAAGTCTCATCTGCCCGAGGTTTTCCACCCTTCGTCCGTTGTGCCTCTGCATCGTTGAAGCCCAGCCGTTCACTGTCACTCCTTCTCCGCCCTTCGTCCGTTTCGTCAGCATGAAACCCAGCCACTGTCGCCACGTACCACACCCGAGTCGTTTCCTCCATCTTCTAGTCGTGCGCCACACTTGCGCTAGCCTTCCCTCTTCACTTGAGTCGTTTCCCTCGCCTAAGTCATGTTCGAGCTGATTTCTTTGTTACCCGAGCTGAGTAAGCTATTTTCTTCCAAGCTAAGCCGTCAATGGATGACCATATGCGAGGCCCTAATCGCGTATCGCCCACACAATAGAGGCCAAATGACAAGGAATATGCATGAGGCCTTGACTCGGAGAAAGGAGGTCCGGGTGAAGAGAAGTATAGGACATCCCATAAGGAAGTATAAAAAGGGAGGAAGGTGA

Coding sequence (CDS)

CTCATTGAAACACTTGTAAACCCTTCCATCTCTTCTCCTTCATTTTTCTTCTTCAGGCCACCGCCCCCACTCTTCTCTTCTTCTCTGTTCAACTCCGATAATCTTATCCATTCAGCATCCCCCAAGCATGTGTCCTTTGTTGAGTTCTGGTCAGCGTCGTTCACCGTAGCTCCATCTCCAATTCTCATTCGTGAAGTCTCATCTGCCCGAGGTTTTCCACCCTTCGTCCGTTGTGCCTCTGCATCGTTGAAGCCCAGCCGTTCACTGTCACTCCTTCTCCGCCCTTCGTCCGTTTCGTCAGCATGA

Protein sequence

LIETLVNPSISSPSFFFFRPPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPILIREVSSARGFPPFVRCASASLKPSRSLSLLLRPSSVSSA
Homology
[Close]
BLAST of MELO3C034741 vs. NCBI nr
Match: KAA0045973.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-28
Identity = 71/78 (91.03%), Postives = 71/78 (91.03%), Query Frame = 0 

Query: 20  PPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPILIREVSSARGFPPFVRCA 79
           PPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPI IREVSSARGFPPFVRCA
Sbjct: 138 PPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPIPIREVSSARGFPPFVRCA 197

Query: 80  SASLKPSRSLSLL--LRP 96
           S SLKPS SLS    LRP
Sbjct: 198 SPSLKPSHSLSSFSALRP 215

[Close]
BLAST of MELO3C034741 vs. ExPASy TrEMBL
Match: A0A5A7TQY3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005210 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.0e-28
Identity = 71/78 (91.03%), Postives = 71/78 (91.03%), Query Frame = 0 

Query: 20  PPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPILIREVSSARGFPPFVRCA 79
           PPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPI IREVSSARGFPPFVRCA
Sbjct: 138 PPPPLFSSSLFNSDNLIHSASPKHVSFVEFWSASFTVAPSPIPIREVSSARGFPPFVRCA 197

Query: 80  SASLKPSRSLSLL--LRP 96
           S SLKPS SLS    LRP
Sbjct: 198 SPSLKPSHSLSSFSALRP 215

The following BLAST results are available for this feature:
BLAST of MELO3C034741 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045973.14.1e-2891.03pol protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C034741 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034741 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TQY32.0e-2891.03Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005210 P... [more]
BLAST of MELO3C034741 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034741.1MELO3C034741.1mRNA