MELO3C034691.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034691.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionzinc-regulated protein 8-like
Locationchr11: 2802581 .. 2803294 (-)
RNA-Seq ExpressionMELO3C034691.jh1
SyntenyMELO3C034691.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCTCTCAAAATCTTTCATAATAATTCCATCAAAATCCCATTTTCAATCTCTCTCTCTCTCCTCCCCATCTCCACCATGGATGATTCTCCTTCTCCTTCTCCTTCTCCAACTTTCTTCCTCTCTCCAAATCACCCTCTGAGCTCACCCGAACTACAATTCTCGGACGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCGCCACCTCCCCCGCCTTCGACGAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCGCCCACCCTACCTTTCTCCGCAACCTCAAGAAGCACGGTTTCGGTTGCATCGAGTGGCTCGCCGCCGTCGTGGATGAAGTTCGTCGTGTTTGAGATTCCGATGAAGCTGAATTCTCTAGTAGTTGACTGGCGGATAGAAAAAACGGAAACTTTCATGTATTTTCCTTTTTTCTTTTTTCCTTTTTTTTTTTGAAGAAACAAAATATTAATGTCATTTTCCCTTTAATTTTTCTTTGGGAGTGATCGATCAATGTAGTGATGTGTAATTAAAACTGAGATTTATTTGTATAATGTTATGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT

mRNA sequence

TCTCTCTCTCTCAAAATCTTTCATAATAATTCCATCAAAATCCCATTTTCAATCTCTCTCTCTCTCCTCCCCATCTCCACCATGGATGATTCTCCTTCTCCTTCTCCTTCTCCAACTTTCTTCCTCTCTCCAAATCACCCTCTGAGCTCACCCGAACTACAATTCTCGGACGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCGCCACCTCCCCCGCCTTCGACGAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCGCCCACCCTACCTTTCTCCGCAACCTCAAGAAGCACGGTTTCGGTTGCATCGAGTGGCTCGCCGCCGTCGTGGATGAAGTTCGTCGTGTTTGAGATTCCGATGAAGCTGAATTCTCTAGTAGTTGACTGGCGGATAGAAAAAACGGAAACTTTCATGTATTTTCCTTTTTTCTTTTTTCCTTTTTTTTTTTGAAGAAACAAAATATTAATGTCATTTTCCCTTTAATTTTTCTTTGGGAGTGATCGATCAATGTAGTGATGTGTAATTAAAACTGAGATTTATTTGTATAATGTTATGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT

Coding sequence (CDS)

ATGGATGATTCTCCTTCTCCTTCTCCTTCTCCAACTTTCTTCCTCTCTCCAAATCACCCTCTGAGCTCACCCGAACTACAATTCTCGGACGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAAGACCTCCTCCCCGACTCCCCTTCTCCGCCCCCCTCCGCCACCTCCCCCGCCTTCGACGAACTCCCCATCAAAAACCCTCTCGTCAAACACGCCGCCCTCGCCTACCTTCAGCCCATGCTCACCCCACCCACCACCGCCCACCCTACCTTTCTCCGCAACCTCAAGAAGCACGGTTTCGGTTGCATCGAGTGGCTCGCCGCCGTCGTGGATGAAGTTCGTCGTGTTTGA

Protein sequence

MDDSPSPSPSPTFFLSPNHPLSSPELQFSDDIEMTPLQSYTSLKDLLPDSPSPPPSATSPAFDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKKHGFGCIEWLAAVVDEVRRV
Homology
BLAST of MELO3C034691.jh1 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152 bits (385), Expect = 3.29e-45
Identity = 83/111 (74.77%), Postives = 91/111 (81.98%), Query Frame = 0

Query: 10  SPTFFLSPNHPLSSPELQFSDDIEMTPLQSYTSLKDLLPDSPSPPPSAT----SPAFDEL 69
           SPTF LS +  LSS EL+FSD IEMTPLQSYTSLKDLLPD+PSPPPSA      PA+DEL
Sbjct: 5   SPTF-LSSDRLLSSSELEFSD-IEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWDEL 64

Query: 70  PIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKKHGFGCIEWLAAVVDEV 116
           PIKNPLVKHAALAYLQPMLTPP     +F+R LKKHGFGCIEWL AV+ E+
Sbjct: 65  PIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGEL 113

BLAST of MELO3C034691.jh1 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba])

HSP 1 Score: 86.7 bits (213), Expect = 2.16e-18
Identity = 62/120 (51.67%), Postives = 69/120 (57.50%), Query Frame = 0

Query: 8   SPSPTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----A 67
           S SPTF       L SPE + SD IEM  +QS  YTSLKDLLP  PSPPP+  SP    +
Sbjct: 25  SHSPTFLFHDGG-LDSPEFKVSD-IEMITIQSLTYTSLKDLLP--PSPPPAIMSPTHNSS 84

Query: 68  FDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKKH--------GFGCIEWLAAVV 113
           + E+PI+NPLVKHAALAYLQPM TP           LK          GFGC  WL  VV
Sbjct: 85  WHEIPIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVV 140

BLAST of MELO3C034691.jh1 vs. NCBI nr
Match: XP_011458695.1 (PREDICTED: uncharacterized protein LOC105349779 [Fragaria vesca subsp. vesca])

HSP 1 Score: 82.8 bits (203), Expect = 3.21e-17
Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 0

Query: 11  PTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----AFDE 70
           P  FLS N    SP + FSD IEM  LQ+  YTSL+DLLP SP   P+  SP    ++ E
Sbjct: 12  PNSFLSQNG-FPSP-VDFSD-IEMITLQAVTYTSLRDLLPSSP---PTIASPTHNSSWHE 71

Query: 71  LPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLK-----KHGFGCIEWLAAV 112
           +PIKNPLVKHAALAYLQPM TPP       LR ++       G GC++WL  V
Sbjct: 72  IPIKNPLVKHAALAYLQPMSTPPEVGGKGILRTIRDKCGCSDGIGCVDWLRDV 118

BLAST of MELO3C034691.jh1 vs. NCBI nr
Match: XP_030523234.1 (uncharacterized protein LOC115735926 [Rhodamnia argentea])

HSP 1 Score: 82.8 bits (203), Expect = 3.53e-17
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 0

Query: 14  FLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSPAFD----ELPI 73
           FL  N   ++ +L+ SD IEM   QS  YTSL+DLLP SP P PSA SP  +    E+PI
Sbjct: 19  FLHHNGFATAAQLEISD-IEMIAFQSVTYTSLRDLLPSSP-PLPSAASPTTNSSWYEIPI 78

Query: 74  KNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKKHGFGCIEWLAAVVDEVRR 118
           KNPLVKHAALAYLQPM +PP       L  LK    GC  WL  ++  V R
Sbjct: 79  KNPLVKHAALAYLQPMSSPPEVGDKGLLGKLKD-SCGCFCWLGDILSRVLR 126

BLAST of MELO3C034691.jh1 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica])

HSP 1 Score: 82.8 bits (203), Expect = 4.37e-17
Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 8   SPSPTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----A 67
           S SP+F L    P    E++ SD IEM  +Q+  YTSLKDLLP SP   P+  SP    +
Sbjct: 19  SHSPSFLL----PNGFGEIEISD-IEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSS 78

Query: 68  FDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKK-------HGFGCIEWLAAVV 113
           + E+PIKNPLVKHAALAYLQPM TPP       LR L++       +G GC  WL  VV
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFSWLGDVV 129

BLAST of MELO3C034691.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 1.22e-72
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 0

Query: 1   MDDSPSPSPSP--TFFLSPNHPLSSPELQFSDDIEMTPLQSYTSLKDLLPDSPSPPPSAT 60
           M+DSPSPSPSP  T FLSPNHPLSSPEL+FSDDIEMTPLQSYTSLKDLLPDSPSPPPSAT
Sbjct: 1   MEDSPSPSPSPSPTSFLSPNHPLSSPELEFSDDIEMTPLQSYTSLKDLLPDSPSPPPSAT 60

Query: 61  SPAFDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKKHGFGCIEWLAAVVDEVRR 119
           SPAFD+LPIKNPLVKHAALAYLQPMLTPPTT+HPTFLR LKKHGFGCIEWLAAVV EVRR
Sbjct: 61  SPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRILKKHGFGCIEWLAAVVHEVRR 120

BLAST of MELO3C034691.jh1 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.04e-18
Identity = 62/120 (51.67%), Postives = 69/120 (57.50%), Query Frame = 0

Query: 8   SPSPTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----A 67
           S SPTF       L SPE + SD IEM  +QS  YTSLKDLLP  PSPPP+  SP    +
Sbjct: 25  SHSPTFLFHDGG-LDSPEFKVSD-IEMITIQSLTYTSLKDLLP--PSPPPAIMSPTHNSS 84

Query: 68  FDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKKH--------GFGCIEWLAAVV 113
           + E+PI+NPLVKHAALAYLQPM TP           LK          GFGC  WL  VV
Sbjct: 85  WHEIPIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVV 140

BLAST of MELO3C034691.jh1 vs. ExPASy TrEMBL
Match: M5VHF3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.84e-17
Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 8   SPSPTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----A 67
           S SP+F L    P    E++ SD IEM  +Q+  YTSLKDLLP SP   P+  SP    +
Sbjct: 19  SHSPSFLL----PNGFGEIEISD-IEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSS 78

Query: 68  FDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKK-------HGFGCIEWLAAVV 113
           + E+PIKNPLVKHAALAYLQPM TPP       LR L++       +G GC  WL  VV
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFSWLGDVV 129

BLAST of MELO3C034691.jh1 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.11e-17
Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 8   SPSPTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----A 67
           S SP+F L    P    E++ SD IEM  +Q+  YTSLKDLLP SP   P+  SP    +
Sbjct: 19  SHSPSFLL----PNGFGEIEISD-IEMITIQTVTYTSLKDLLPASP---PTIMSPTHNSS 78

Query: 68  FDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKK-------HGFGCIEWLAAVV 113
           + E+PIKNPLVKHAALAYLQPM TPP       LR L++       +G GC  WL  VV
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVV 129

BLAST of MELO3C034691.jh1 vs. ExPASy TrEMBL
Match: A0A6P5S7A4 (uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.11e-17
Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 8   SPSPTFFLSPNHPLSSPELQFSDDIEMTPLQS--YTSLKDLLPDSPSPPPSATSP----A 67
           S SP+F L    P    E++ SD IEM  +Q+  YTSLKDLLP SP   P+  SP    +
Sbjct: 19  SHSPSFLL----PNGFGEIEISD-IEMITIQTVTYTSLKDLLPASP---PTIMSPTHNSS 78

Query: 68  FDELPIKNPLVKHAALAYLQPMLTPPTTAHPTFLRNLKK-------HGFGCIEWLAAVV 113
           + E+PIKNPLVKHAALAYLQPM TPP       LR L++       +G GC  WL  VV
Sbjct: 79  WHEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVV 129

BLAST of MELO3C034691.jh1 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 5.6e-06
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0

Query: 36  PLQSYTSLKDLLPDSPSPPPS-------ATSPAFDELPIKNPLVKHAALAYLQPMLTPPT 95
           PL  YTSLKD+LP S +   S       A++ +   + I+N LVK AA +YLQP  TP  
Sbjct: 37  PLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVKQAACSYLQPS-TPTP 96

Query: 96  TAHPTFLRNLKKHGFGCIEWLAAVVDEVRRV 120
           +++P+FLR +       I  ++A  D + R+
Sbjct: 97  SSNPSFLRRVSS---SFIRLVSAFFDALLRI 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6571006.13.29e-4574.77hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_015893260.12.16e-1851.67zinc-regulated protein 8-like [Ziziphus jujuba][more]
XP_011458695.13.21e-1751.33PREDICTED: uncharacterized protein LOC105349779 [Fragaria vesca subsp. vesca][more]
XP_030523234.13.53e-1751.35uncharacterized protein LOC115735926 [Rhodamnia argentea][more]
XP_007199228.24.37e-1749.58uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical pr... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LPR91.22e-7292.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1[more]
A0A6P4ADJ41.04e-1851.67zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 ... [more]
M5VHF31.84e-1749.58Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032m... [more]
A0A314Z2H12.11e-1749.58Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200... [more]
A0A6P5S7A42.11e-1749.58uncharacterized protein LOC110753763 OS=Prunus avium OX=42229 GN=LOC110753763 PE... [more]
Match NameE-valueIdentityDescription
AT3G52520.15.6e-0637.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR34569:SF12SUBFAMILY NOT NAMEDcoord: 26..116
NoneNo IPR availablePANTHERPTHR34569EXPRESSED PROTEINcoord: 26..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034691.jh1.t1MELO3C034691.jh1.t1mRNA