MELO3C033560 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033560
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Location	chr02: 22670183 .. 22670856 (+)
RNA-Seq Expression	MELO3C033560
Synteny	MELO3C033560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGTGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGCACTAATGGGGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTGCGATATCTTTAATAGCGGGTTGGTTACATCTACAACCGAAATGGAAACCGAGCGTTTCCTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGACATTTAGTCCATGTCGCCATTCCTGCATCTAGGGGAGAATCTGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGTACTTCCGAAGGAGCAGGAACTGCCATTCTAACCCTTCTCGGTGGATTCCATCCGCAAACGCAAAGTTTATGGCTGACTGATATGGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTGTTGCTGGTCATATGTATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATCTTTTAGAAGCACATATTCCGCCGGGGGGACGATTGGGGCGTGGACATAA

mRNA sequence

TTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGTGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGCACTAATGGGGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTGCGATATCTTTAATAGCGGGTTGGTTACATCTACAACCGAAATGGAAACCGAGCGTTTCCTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGACATTTAGTCCATGTCGCCATTCCTGCATCTAGGGGAGAATCTGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGAGCAGGAACTGCCATTCTAACCCTTCTCGGTGGATTCCATCCGCAAACGCAAAGTTTATGGCTGACTGATATGGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTGTTGCTGGTCATATGTATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATCTTTTAGAAGCACATATTCCGCCGGGGGGACGATTGGGGCGTGGACATAA

Coding sequence (CDS)

TTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGTGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGCACTAATGGGGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTGCGATATCTTTAATAGCGGGTTGGTTACATCTACAACCGAAATGGAAACCGAGCGTTTCCTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGACATTTAGTCCATGTCGCCATTCCTGCATCTAGGGGAGAATCTGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGAGCAGGAACTGCCATTCTAACCCTTCTCGGTGGATTCCATCCGCAAACGCAAAGTTTATGGCTGACTGATATGGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTGTTGCTGGTCATATGTATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATCTTTTAGAAGCACATATTCCGCCGGGGGGACGATTGGGGCGTGGACAT

Protein sequence

FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQGLGPLFTGAGTAILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH

Homology

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BLAST of MELO3C033560 vs. NCBI nr
Match: YP_004841782.1 (photosystem I P700 apoprotein A2 [Cucumis melo subsp. melo] >YP_009004043.1 photosystem I P700 apoprotein A2 [Cucumis hystrix] >YP_009325988.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus lanatus] >YP_009346484.1 photosystem I P700 apoprotein A2 [Cucumis x hytivus] >YP_009348030.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus mucosospermus] >YP_009420793.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus colocynthis] >YP_009431556.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus amarus] >YP_009860072.1 photosystem I P700 apoprotein A2 [Cucumis melo subsp. agrestis] >YP_247598.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus] >Q4VZN4.1 RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2; AltName: Full=PSI-B; AltName: Full=PsaB [Cucumis sativus] >ALF03300.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus var. hardwickii] >APW82460.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus lanatus subsp. vulgaris] >ASY96579.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. conomon] >ASY96666.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. makuwa] >ASY96753.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. momordica] >ASY96840.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. dudaim] >ASY96927.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. cantalupo] >ASY97101.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. inodorus] >ASY97275.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. flexuosus] >AVE15330.1 PsaB [Cucumis sativus var. sativus] >QJF46382.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo] >QZL38680.1 photosystem I P700 apoprotein A2 [Citrullus ecirrhosus])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

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BLAST of MELO3C033560 vs. NCBI nr
Match: KAF9825350.1 (hypothetical protein H0E87_005072 [Populus deltoides])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. NCBI nr
Match: YP_009753088.1 (photosystem I P700 apoprotein A2 [Corallocarpus boehmii] >QIT06160.1 photosystem I P700 apoprotein A2 [Corallocarpus boehmii])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. NCBI nr
Match: YP_009431641.1 (photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii] >ASY96234.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii])

HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113
Identity = 202/224 (90.18%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFL+AGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLIAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

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BLAST of MELO3C033560 vs. NCBI nr
Match: YP_009752074.1 (photosystem I P700 apoprotein A2 [Dendrosicyos socotranus] >QIT05484.1 photosystem I P700 apoprotein A2 [Dendrosicyos socotranus])

HSP 1 Score: 419.1 bits (1076), Expect = 2.2e-113
Identity = 202/224 (90.18%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAF+FLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFLFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy Swiss-Prot
Match: Q4VZN4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psaB PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 1.7e-116
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy Swiss-Prot
Match: Q8S8X5 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=psaB PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.1e-114
Identity = 199/224 (88.84%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTD+AH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTAEGAGTAILTLLGGFHPQTQSLWLTDIAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHS+KDLL+AHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSMKDLLDAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy Swiss-Prot
Match: Q27S51 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Solanum tuberosum OX=4113 GN=psaB PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 3.5e-114
Identity = 199/224 (88.84%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGE VRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTAEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHS+KDLL+AHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSMKDLLDAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy Swiss-Prot
Match: A6MMC1 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Chloranthus spicatus OX=13006 GN=psaB PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 4.6e-114
Identity = 199/224 (88.84%), Postives = 200/224 (89.29%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIP SRGE VRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHS+KDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy Swiss-Prot
Match: Q09FW2 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Nandina domestica OX=41776 GN=psaB PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 4.6e-114
Identity = 199/224 (88.84%), Postives = 200/224 (89.29%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIP SRGE VRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSGSHLFGTSQGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHS+KDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSMKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy TrEMBL
Match: A0A218KG43 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaB PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.2e-114
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy TrEMBL
Match: G3ETY4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo subsp. melo OX=412675 GN=psaB PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.2e-114
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy TrEMBL
Match: A0A1X9Q1T8 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psaB PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.2e-114
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy TrEMBL
Match: A0A1S4EU08 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo OX=3656 GN=psaB PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.2e-114
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. ExPASy TrEMBL
Match: A0A249RZ56 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo var. cantalupensis OX=3658 GN=psaB PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.2e-114
Identity = 203/224 (90.62%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV
Sbjct: 156 HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     GAGTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 403.7 bits (1036), Expect = 8.9e-113
Identity = 193/224 (86.16%), Postives = 198/224 (88.39%), Query Frame = 0


Query: 1   FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWL 60
           FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN DLYTGALFLLFLSA+SLI GWL
Sbjct: 96  FGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSALSLIGGWL 155

Query: 61  HLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDV 120
           HLQPKWKP VSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGE VRWNNFL+V
Sbjct: 156 HLQPKWKPRVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLNV 215

Query: 121 LPHPQGLGPLFT---------------------GAGTAILTLLGGFHPQTQSLWLTDMAH 180
           LPHPQGLGPLFT                     G+GTAILTLLGGFHPQTQSLWLTDMAH
Sbjct: 216 LPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGSGTAILTLLGGFHPQTQSLWLTDMAH 275

Query: 181 HHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HHLAIA +FL+AGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH
Sbjct: 276 HHLAIAILFLIAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 319

[Close]

BLAST of MELO3C033560 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-41
Identity = 92/211 (43.60%), Postives = 120/211 (56.87%), Query Frame = 0


Query: 12  GGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVS 71
           GG    + I  SG +Q W   G+ +   LY  A+  L  +A+ L AGW H   K  P ++
Sbjct: 129 GGGFRGIQIT-SGFFQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYH-KAAPKLA 188

Query: 72  WFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPH-------- 131
           WF++ ES LNHHL+GL G+ SL+W GH VHV++P ++  +   +     LPH        
Sbjct: 189 WFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDL 248

Query: 132 --------PQGLGPLFT---GAGTAILTLLGGFHPQTQSLWLTDMAHHHLAIAFIFLVAG 191
                    +G  P FT      +  LT  GG  P T  LWLTD+AHHHLAIA +FL+AG
Sbjct: 249 LAQLYPSFAEGATPFFTLNWSKYSEFLTFRGGLDPVTGGLWLTDIAHHHLAIAILFLIAG 308

Query: 192 HMYRTNFGIGHSIKDLLEAHIPPGGRLGRGH 204
           HMYRTN+GIGH IKD+LEAH   G   G+GH
Sbjct: 309 HMYRTNWGIGHGIKDILEAH--KGPFTGQGH 335

The following BLAST results are available for this feature:

BLAST of MELO3C033560 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841782.1	1.3e-113	90.63	photosystem I P700 apoprotein A2 [Cucumis melo subsp. melo] >YP_009004043.1 phot...	[more]
KAF9825350.1	1.3e-113	90.63	hypothetical protein H0E87_005072 [Populus deltoides]	[more]
YP_009753088.1	1.3e-113	90.63	photosystem I P700 apoprotein A2 [Corallocarpus boehmii] >QIT06160.1 photosystem...	[more]
YP_009431641.1	1.7e-113	90.18	photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii] >ASY96234.1 ph...	[more]
YP_009752074.1	2.2e-113	90.18	photosystem I P700 apoprotein A2 [Dendrosicyos socotranus] >QIT05484.1 photosyst...	[more]

BLAST of MELO3C033560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN4	1.7e-116	90.63	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psa...	[more]
Q8S8X5	2.1e-114	88.84	Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=...	[more]
Q27S51	3.5e-114	88.84	Photosystem I P700 chlorophyll a apoprotein A2 OS=Solanum tuberosum OX=4113 GN=p...	[more]
A6MMC1	4.6e-114	88.84	Photosystem I P700 chlorophyll a apoprotein A2 OS=Chloranthus spicatus OX=13006 ...	[more]
Q09FW2	4.6e-114	88.84	Photosystem I P700 chlorophyll a apoprotein A2 OS=Nandina domestica OX=41776 GN=...	[more]

BLAST of MELO3C033560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG43	6.2e-114	90.63	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwicki...	[more]
G3ETY4	6.2e-114	90.63	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo subsp. melo OX=41...	[more]
A0A1X9Q1T8	6.2e-114	90.63	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psa...	[more]
A0A1S4EU08	6.2e-114	90.63	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo OX=3656 GN=psaB P...	[more]
A0A249RZ56	6.2e-114	90.63	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo var. cantalupensi...	[more]

BLAST of MELO3C033560 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00340.1	8.9e-113	86.16	Photosystem I, PsaA/PsaB protein	[more]
ATCG00350.1	3.1e-41	43.60	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 157..175 score: 78.95 coord: 40..64 score: 58.24 coord: 80..104 score: 77.85
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 1..203 e-value: 9.3E-75 score: 252.3
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 1..203 e-value: 6.5E-90 score: 304.1
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 1..197
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 1..203
None	No IPR available	PANTHER	PTHR30128:SF55	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033560.1	MELO3C033560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid