MELO3C033291 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033291
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr08: 16674710 .. 16678384 (+)
RNA-Seq Expression	MELO3C033291
Synteny	MELO3C033291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGACCGGTCTTATGGGGAATCTATTTGGCCACCTAATATGTTCCTTGCAGATTGTTTTGTCTCTCCAATCCTTTTGACAGTATTTTCTTTGTGTACTAAATGGGGTAGCTTACATGGTTAGAGTTTGACTATTGTTGGATTTTTCTCCTTTTTATCTTGTCAATTGTAGAGATCGTAGAGATTCTTCTCCATTTTTTGGTTTGTGGTCATTAAAGGCATCATAACTTTTATCATCCCCCTATATATACATCAACCCTCTTTTGTCATATTACTTGTGTTTTTAAGTTCATTGGTTGTTGGTCACTGTTTTGTTCCTTTTTCTTTGGTAGGTTACCTTCTTTTTCTATATTATTGTCATCTTCCATCCCTTTTTGCCTTCCATCCCTGTTTTACTCCATGTTATCATTACTGTCATTCACGTATGTTGCAATCTTTTCATTCATGTTTCAACTACTACAAATTCGGTTAAAATCTCTTTATATGCTTGTACTTGCATCTTTCCATTTCGTTGGTTGTTTGTGTGTCCTTTGTTGTTTCTTCTATTTTAGTTCACTTTCTCTTTTTCATATTATTATCATCCTTCATCCCTTTCTACCTTGTTTTGTATCTATGCTCCATATTATTATTAGTGCTTACGTGTGTTGCAATCTTTTAATTGATGTTTCAACTACTATAAATTCGTTTAAAATTGCTTTATATGGTTTTACTTACATCTTTTGAGTTCATTGGTTGTTTTTGTGTCCTCTGTTTCTTCTCCTTTGGTAGTTCACTTTTTTTCTTCTATATTATTATCATCTTCCATCCCTTTCTGCCTTGTTTTGTATCTATGCTCCATGTAATTTGTGTTTGTTCCTTGTTTTGCATATTTTTAATTGATGTTTCCACTACTAGAAATTCGATTCAAATTATTGAACAAATTTTTTTCCTCTAAAGCTACTTTTTTTCTAAAATCGTATACATTTTCATGTTTACTATTATCGAGCTTCGTTAATCTTCATTTCGGGTCCATTCGTCGACGTACAAGGTACGTATTGGTTATGTTTATTTTATTTGACAAGTTTCAACTACTCATCTCAATTACGATAGTTCGTGCAAATGTTACTGTGTAGTTTCCTAATTTTCTTTTTCTTCTACAAGACGTCGACCTTTATTACCCTCGTATACTACAAATTAGCCGTTTGTAGTATATTTTATATTTTCTTGTTTTTTTCTTTCTGTTTATGGTTAGCACATTGTAATTTAAATTGAATTGTTCACAACAAACTGTCGGTTCTGTACTTTTCCTTGTTTTCGTTTTGTATTTACACTATATTGCACTATATGTAGAACATTTCTAGTATCCTTTTATTGTATGTACGATAAAATTGCATTGCTCTAAATGTTTTCCTTGCACCTTTAAGTTCGCTTTTGTACATATAACAATCTCCTTAGATTGCATTTAACTGTTACTTTCAATGCGAACATACTTGCCACATTAGTGGAAGAAAATTAGGAACGAAATATCTTTTACAAAAGTGACTAGTGTCTTTGACAATAAAAAGCATGCCCGCGAATATAACGACCAAAAATTATAACTTTAAAAAAATGTCTTATTACATTCTCATGACTATGTTAATTTAGGAAAAAAAATCATGCCCGCTAATATGTTTACAAATCATACTAGAAAATGTTCCAAAGTATTGTGACTTGTTGTTTTAACACATCTTACGTTATTGTTTTTTTCACATTCGAAACATAGGTCTAAAACTAGCTATTTTTTCGTTTTCAAAATTAAGTGCCACCGGGTTCATACAAAACTTTATTAGTGCAATTTCGTCTGAGTGATGTGAGTTCAATATTTGTAATTGTTCTTAGTACTAATTTGAAATTATGATTTTTGCAAGAGTAGTATATATTTTTTAAAGCATACACATCCATTACAAGTCTTGGCATTCACTGAAATTAGAATTTTAAAAAAAGTTGTTTATATTTTTCTTATCATCTACATTCATCACAAGTCTTGTCATTTTTCAAATTAGAATTTTAACAAAGCTATAGATATTTTGTTTTTTGTCATCCACATTCACCCTAAAGTCGTTCCAGTTTTCAAACTAGAATTTTTTCAAGAGTTGTACATATGTTTCAAATTCTAATTTGATGTTTACATCTTTGTTTTGAATATGTATATCATCATTCATGTGTGACGCATGCGTTATAGGTGTAATAGCATTCTAATTAGACACGTACTTAATCATGTTAACAGTTGTTACCTTCAAATGGACCCACAAAACCTTGCGGCAATCCTAACTGTATTCACAATTTCCCAACGTCAGTTACTGCTAACGTTGGAGGCACTCATGACAACAATAAGCGCCTAACACTTATACCCTACGATACTAGGCATAGAATTAGGCAACTTGCGTACTTTCGTATGATGCATGAGATGGACCTAGTTTGCCACCAAAGTACTCGAATGGACAAGTGGATATTTGTCATTCTATGCCATTTACTAAGGACTGTTACTGGTCTTTCGTTGACAAAAATTGTCGATGTGGAAAAAATGGTTGCAATATTCTTGCACGTCCTTGTCCATTACGTGAAAAAATGAGTTATCCAAAGGGAATTTGTTCGGTTTGATGCGACTGTTTCCCATCATTTCAACCTCATCTTGTTGGTTGTGATACGACTACATGACGAGTTGCTAAAGAAACCGTAGCCAGTAACTAACACATGCATCGATCCACAATGGAAGTGCTTCGAGGTGCGCGTAGTTGAAGTCATCTGTATGTCATATATCACTACGTCCCACTAATTAATGGCGATTTGTTTAACTTTGCAGAATTACCTTGGGGCATTGGATGGAACGTATATAAAGGTGAACGTGTCGCAAACCGATCGCGCTAGGTACAAAACACGTAAGGGTGAAGTTGCCACTAATGTCCTCAGAGTGTACAACTCGAAAGGCGATTTCGATTCATTTTGGCAGGCTGGGAAGGATCTGCAACTGATTCGCACATTCTTCAAGATGCGCTTGTACAGCCAAACAGACTATAAATCCCCAAGGATATTTACAATTTCTACTCCTCCCACGACATTTAAAACTTCCTATATCACCGCGTATAATCCGTTGTGTAATGTAATAGGGTTTTACTATCTGCACGACATAGGGTATCCAAACGCTAAGGGATTTCTTGCTTCTTACAAAAGTCAGAGGTACCACTTGCAAGAGAGGCGTGGCGTTAGAAACGCACCAACCGCTGTTAAAGAGTAGTTTAACATGAAACACTTATCGACACTGAATGTCATTGAATGCACGTTCGATCTTTTGAAGGGTTGCGACAATCCTTCATGGCAAGTCTCACGATTTTAGCATGTTAGCTACTGCACAATTTGATAAACAGAGAGATCATGAATGTTGATGATTTAGAGGACATTGATAAGGGAGACTCGGTATACGCGACGACTGTAGGTGACGACATTCACTACATTAAGACCTCCAATGAATGGACTCAATGGCGAGATGAATTAGTCACAGATATGTTCAACAAATGGCAGTTGCGTAATGAGTAGCTCCTACCATTTGAAATTAGCAGCCCTTTGTTTTTGTTATTTTACTATAGCTACTGTCTTCTTATATGTCAAATGTATGAGTGCATGAATTAAATTAATGGAAAACTATACATTCCCATGA

mRNA sequence

ATGAATGACCGGTCTTATGGGGAATCTATTTGGCCACCTAATATGTTCCTTGCAGATTGTTTTGTCTCTCCAATCCTTTTGACAGTTACCTTCTTTTTCTATATTATTGTCATCTTCCATCCCTTTTTGCCTTCCATCCCTGTTTTACTCCATGTTATCATTACTGTCATTCACTTGTTACCTTCAAATGGACCCACAAAACCTTGCGGCAATCCTAACTGTATTCACAATTTCCCAACGTCAGTTACTGCTAACGTTGGAGGCACTCATGACAACAATAAGCGCCTAACACTTATACCCTACGATACTAGGCATAGAATTAGGCAACTTGCGTACTTTCGTATGATGCATGAGATGGACCTAGTTTGCCACCAAAGTACTCGAATGGACAAGTGGATATTTGTCATTCTATGCCATTTACTAAGGACTGTTACTGGTCTTTCGTTGACAAAAATTGTCGATGTGGAAAAAATGGTTGCAATATTCTTGCACGTCCTTGTCCATTACAATTACCTTGGGGCATTGGATGGAACGTATATAAAGGTGAACGTGTCGCAAACCGATCGCGCTAGGTACAAAACACGTAAGGGTGAAGTTGCCACTAATGTCCTCAGAGTGTACAACTCGAAAGGCGATTTCGATTCATTTTGGCAGGCTGGGAAGGATCTGCAACTGATTCGCACATTCTTCAAGATGCGCTTGTACAGCCAAACAGACTATAAATCCCCAAGGATATTTACAATTTCTACTCCTCCCACGACATTTAAAACTTCCTATATCACCGCGTATAATCCGTTGTGTAATGTAATAGGGTTTTACTATCTGCACGACATAGGGTATCCAAACGCTAAGGGATTTCTTGCTTCTTACAAAAGTCAGAGGTACCACTTGCAAGAGAGGCGTGGCGTTAGAAACGCACCAACCGCTGTTAAAGAGTAGTTTAACATGAAACACTTATCGACACTGAATGTCATTGAATGCACGTTCGATCTTTTGAAGGGTTGCGACAATCCTTCATGGCAAGTCTCACGATTTTAGCATGTTAGCTACTGCACAATTTGATAAACAGAGAGATCATGAATGTTGATGATTTAGAGGACATTGATAAGGGAGACTCGGTATACGCGACGACTGTAGGTGACGACATTCACTACATTAAGACCTCCAATGAATGGACTCAATGGCGAGATGAATTAGTCACAGATATGTTCAACAAATGGCAGTTGCGTAATGAGTAGCTCCTACCATTTGAAATTAGCAGCCCTTTGTTTTTGTTATTTTACTATAGCTACTGTCTTCTTATATGTCAAATGTATGAGTGCATGAATTAAATTAATGGAAAACTATACATTCCCATGA

Coding sequence (CDS)

ATGAATGACCGGTCTTATGGGGAATCTATTTGGCCACCTAATATGTTCCTTGCAGATTGTTTTGTCTCTCCAATCCTTTTGACAGTTACCTTCTTTTTCTATATTATTGTCATCTTCCATCCCTTTTTGCCTTCCATCCCTGTTTTACTCCATGTTATCATTACTGTCATTCACTTGTTACCTTCAAATGGACCCACAAAACCTTGCGGCAATCCTAACTGTATTCACAATTTCCCAACGTCAGTTACTGCTAACGTTGGAGGCACTCATGACAACAATAAGCGCCTAACACTTATACCCTACGATACTAGGCATAGAATTAGGCAACTTGCGTACTTTCGTATGATGCATGAGATGGACCTAGTTTGCCACCAAAGTACTCGAATGGACAAGTGGATATTTGTCATTCTATGCCATTTACTAAGGACTGTTACTGGTCTTTCGTTGACAAAAATTGTCGATGTGGAAAAAATGGTTGCAATATTCTTGCACGTCCTTGTCCATTACAATTACCTTGGGGCATTGGATGGAACGTATATAAAGGTGAACGTGTCGCAAACCGATCGCGCTAGGTACAAAACACGTAAGGGTGAAGTTGCCACTAATGTCCTCAGAGTGTACAACTCGAAAGGCGATTTCGATTCATTTTGGCAGGCTGGGAAGGATCTGCAACTGATTCGCACATTCTTCAAGATGCGCTTGTACAGCCAAACAGACTATAAATCCCCAAGGATATTTACAATTTCTACTCCTCCCACGACATTTAAAACTTCCTATATCACCGCGTATAATCCGTTGTGTAATGTAATAGGGTTTTACTATCTGCACGACATAGGGTATCCAAACGCTAAGGGATTTCTTGCTTCTTACAAAAGTCAGAGGTACCACTTGCAAGAGAGGCGTGGCGTTAGAAACGCACCAACCGCTGTTAAAGAGTAG

Protein sequence

MNDRSYGESIWPPNMFLADCFVSPILLTVTFFFYIIVIFHPFLPSIPVLLHVIITVIHLLPSNGPTKPCGNPNCIHNFPTSVTANVGGTHDNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLTKIVDVEKMVAIFLHVLVHYNYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLASYKSQRYHLQERRGVRNAPTAVKE

Homology

[Close]

BLAST of MELO3C033291 vs. NCBI nr
Match: KAA0056137.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14143.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 5.6e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 170 NYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTF 229
           NYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTF
Sbjct: 9   NYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTF 68

Query: 230 FKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLAS 289
           FKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLAS
Sbjct: 69  FKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLAS 128

Query: 290 YKSQRYHLQERRGVRNAPTAVKE 313
           YKSQRYHLQERRGVRNAPTAVKE
Sbjct: 129 YKSQRYHLQERRGVRNAPTAVKE 151

[Close]

BLAST of MELO3C033291 vs. NCBI nr
Match: KAA0068124.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 209.1 bits (531), Expect = 5.3e-50
Identity = 118/232 (50.86%), Postives = 146/232 (62.93%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++ KR+T IPY+TRHRIRQLAYF M+H  DL+C QSTRMD+  F ILCHLLRT+ GL+ T
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFHMIHGSDLICRQSTRMDRRCFAILCHLLRTIAGLTST 88

Query: 151 KIVDVEKMVAIFLHVLVH----------YNYLGALDGTYIKVNVSQTDRARYKTRKGEVA 210
           ++VDVE+MVA+FLH+L H          +   GALDGTYIKVNV  +D ARY+TRKGEVA
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGALDGTYIKVNVPASDHARYRTRKGEVA 148

Query: 211 TNVLRVYNSKGDFDSFWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYI 270
           TNVL V + KGDF                    +Y   D++       S   +      +
Sbjct: 149 TNVLGVCDRKGDF--------------------VYVLADWEG------SAADSRILRDAL 208

Query: 271 TAYNPLCNVIGFYYLHDIGYPNAKGFLASYKSQRYHLQERRGVRNAPTAVKE 313
           +  N L    G+YYL D GYPNA+GFLA Y+ QRYHLQE RG  NAP+  KE
Sbjct: 209 SRPNGLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKE 234

[Close]

BLAST of MELO3C033291 vs. NCBI nr
Match: KAA0036995.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK21210.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 7.7e-49
Identity = 121/244 (49.59%), Postives = 145/244 (59.43%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++NKRL   PYDTRHRIRQL YFRM+HE DLVC +STRMD+  F ILCHLLRTV+GLS T
Sbjct: 29  NDNKRLPQTPYDTRHRIRQLVYFRMIHESDLVCRESTRMDRRRFAILCHLLRTVSGLSST 88

Query: 151 KIVDVEKMVAIFLHVLVH----------------------YNYLGALDGTYIKVNVSQTD 210
           +IVDVE+MV +FLHVL H                       N LGALDGTYIKVNVS  D
Sbjct: 89  EIVDVEEMVTMFLHVLAHDELIKKPAPVTNNCNDQRWKYFENCLGALDGTYIKVNVSAGD 148

Query: 211 RARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTI 270
           R  ++T KGE+ATNVL V ++KGDF                    +Y    ++       
Sbjct: 149 RPTFRTHKGEIATNVLGVCDTKGDF--------------------VYVLAGWEG------ 208

Query: 271 STPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLASYKSQRYHLQERRGVRNAPT 313
           S   +      ++  N L  + G+YYL D GYPNA+GFL  Y+ QRYHLQE RG  NAPT
Sbjct: 209 SAADSRILRDALSQENGLQVLKGYYYLCDAGYPNAEGFLVPYRGQRYHLQEWRGAANAPT 246

[Close]

BLAST of MELO3C033291 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 1.7e-48
Identity = 127/281 (45.20%), Postives = 155/281 (55.16%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++ KR+T IPY+TRHRIRQLAYFRM+H  DLVCHQSTRMD+  F ILCHLLRT+ GL+ T
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCHQSTRMDRRCFAILCHLLRTIAGLTST 88

Query: 151 KIVDVEKMVAIFLHVLVH------------------------------------------ 210
           ++VDVE+MVA+FLH+LVH                                          
Sbjct: 89  EVVDVEEMVAMFLHILVHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQP 148

Query: 211 -------------YNYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFD- 270
                         N LGALDGTYIKVNV  +DRARY+TRKGEVATNVL V ++KGDF  
Sbjct: 149 VPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

Query: 271 --SFWQ-AGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIG 313
             + W+ +  D +++R                    +S P            N L    G
Sbjct: 209 VLAGWEGSAADSRILRD------------------ALSRP------------NRLKVPKG 268

[Close]

BLAST of MELO3C033291 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.8 bits (517), Expect = 2.2e-48
Identity = 124/277 (44.77%), Postives = 152/277 (54.87%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++ KR+T IPY+TRHRIRQLAYFRM+H  DLVC QSTRMD+  F ILCHLLRT+ GL+ T
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTST 88

Query: 151 KIVDVEKMVAIFLHVLVH------------------------------------------ 210
           ++VDVE+MVA+FLH+L H                                          
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQP 148

Query: 211 -------------YNYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDS 270
                         N LGALDGTYIKVNV  +DRARY+TRKGEVATNVL VY++KGDF  
Sbjct: 149 VPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVYDTKGDF-- 208

Query: 271 FWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYL 313
                             +Y  T ++       S   +      ++  N L    G+YYL
Sbjct: 209 ------------------VYVLTGWEG------SAADSRILRDALSRPNRLKVPKGYYYL 268

[Close]

BLAST of MELO3C033291 vs. ExPASy TrEMBL
Match: A0A5D3CQK7 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00130 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 170 NYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTF 229
           NYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTF
Sbjct: 9   NYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTF 68

Query: 230 FKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLAS 289
           FKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLAS
Sbjct: 69  FKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLAS 128

Query: 290 YKSQRYHLQERRGVRNAPTAVKE 313
           YKSQRYHLQERRGVRNAPTAVKE
Sbjct: 129 YKSQRYHLQERRGVRNAPTAVKE 151

[Close]

BLAST of MELO3C033291 vs. ExPASy TrEMBL
Match: A0A5A7VL29 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00850 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.6e-50
Identity = 118/232 (50.86%), Postives = 146/232 (62.93%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++ KR+T IPY+TRHRIRQLAYF M+H  DL+C QSTRMD+  F ILCHLLRT+ GL+ T
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFHMIHGSDLICRQSTRMDRRCFAILCHLLRTIAGLTST 88

Query: 151 KIVDVEKMVAIFLHVLVH----------YNYLGALDGTYIKVNVSQTDRARYKTRKGEVA 210
           ++VDVE+MVA+FLH+L H          +   GALDGTYIKVNV  +D ARY+TRKGEVA
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGALDGTYIKVNVPASDHARYRTRKGEVA 148

Query: 211 TNVLRVYNSKGDFDSFWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYI 270
           TNVL V + KGDF                    +Y   D++       S   +      +
Sbjct: 149 TNVLGVCDRKGDF--------------------VYVLADWEG------SAADSRILRDAL 208

Query: 271 TAYNPLCNVIGFYYLHDIGYPNAKGFLASYKSQRYHLQERRGVRNAPTAVKE 313
           +  N L    G+YYL D GYPNA+GFLA Y+ QRYHLQE RG  NAP+  KE
Sbjct: 209 SRPNGLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKE 234

[Close]

BLAST of MELO3C033291 vs. ExPASy TrEMBL
Match: A0A5A7T686 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00160 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.7e-49
Identity = 121/244 (49.59%), Postives = 145/244 (59.43%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++NKRL   PYDTRHRIRQL YFRM+HE DLVC +STRMD+  F ILCHLLRTV+GLS T
Sbjct: 29  NDNKRLPQTPYDTRHRIRQLVYFRMIHESDLVCRESTRMDRRRFAILCHLLRTVSGLSST 88

Query: 151 KIVDVEKMVAIFLHVLVH----------------------YNYLGALDGTYIKVNVSQTD 210
           +IVDVE+MV +FLHVL H                       N LGALDGTYIKVNVS  D
Sbjct: 89  EIVDVEEMVTMFLHVLAHDELIKKPAPVTNNCNDQRWKYFENCLGALDGTYIKVNVSAGD 148

Query: 211 RARYKTRKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTI 270
           R  ++T KGE+ATNVL V ++KGDF                    +Y    ++       
Sbjct: 149 RPTFRTHKGEIATNVLGVCDTKGDF--------------------VYVLAGWEG------ 208

Query: 271 STPPTTFKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLASYKSQRYHLQERRGVRNAPT 313
           S   +      ++  N L  + G+YYL D GYPNA+GFL  Y+ QRYHLQE RG  NAPT
Sbjct: 209 SAADSRILRDALSQENGLQVLKGYYYLCDAGYPNAEGFLVPYRGQRYHLQEWRGAANAPT 246

[Close]

BLAST of MELO3C033291 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 8.3e-49
Identity = 127/281 (45.20%), Postives = 155/281 (55.16%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++ KR+T IPY+TRHRIRQLAYFRM+H  DLVCHQSTRMD+  F ILCHLLRT+ GL+ T
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCHQSTRMDRRCFAILCHLLRTIAGLTST 88

Query: 151 KIVDVEKMVAIFLHVLVH------------------------------------------ 210
           ++VDVE+MVA+FLH+LVH                                          
Sbjct: 89  EVVDVEEMVAMFLHILVHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQP 148

Query: 211 -------------YNYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFD- 270
                         N LGALDGTYIKVNV  +DRARY+TRKGEVATNVL V ++KGDF  
Sbjct: 149 VPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

Query: 271 --SFWQ-AGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIG 313
             + W+ +  D +++R                    +S P            N L    G
Sbjct: 209 VLAGWEGSAADSRILRD------------------ALSRP------------NRLKVPKG 268

[Close]

BLAST of MELO3C033291 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 124/277 (44.77%), Postives = 152/277 (54.87%), Query Frame = 0


Query: 91  DNNKRLTLIPYDTRHRIRQLAYFRMMHEMDLVCHQSTRMDKWIFVILCHLLRTVTGLSLT 150
           ++ KR+T IPY+TRHRIRQLAYFRM+H  DLVC QSTRMD+  F ILCHLLRT+ GL+ T
Sbjct: 29  NDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTST 88

Query: 151 KIVDVEKMVAIFLHVLVH------------------------------------------ 210
           ++VDVE+MVA+FLH+L H                                          
Sbjct: 89  EVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQP 148

Query: 211 -------------YNYLGALDGTYIKVNVSQTDRARYKTRKGEVATNVLRVYNSKGDFDS 270
                         N LGALDGTYIKVNV  +DRARY+TRKGEVATNVL VY++KGDF  
Sbjct: 149 VPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVYDTKGDF-- 208

Query: 271 FWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTTFKTSYITAYNPLCNVIGFYYL 313
                             +Y  T ++       S   +      ++  N L    G+YYL
Sbjct: 209 ------------------VYVLTGWEG------SAADSRILRDALSRPNRLKVPKGYYYL 268

[Close]

BLAST of MELO3C033291 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 8.0e-04
Identity = 43/170 (25.29%), Postives = 71/170 (41.76%), Query Frame = 0


Query: 135 VILCHLLRTVTGLSLTKIVDVEKMVAIFLHVLVHYNYLGALDGTYIKVNVSQTDRARYKT 194
           ++ C  +RT T   L +I   E++     +      ++GA+DGT++ V V    +  Y  
Sbjct: 142 LLACDYIRTPTRQELYRI--PERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWN 201

Query: 195 RKGEVATNVLRVYNSKGDFDSFWQAGKDLQLIRTFFKMRLYSQTDYKSPRIFTISTPPTT 254
           R    + N++ + + K  F   W  G       T   +++  Q+D + P       PP+ 
Sbjct: 202 RHDNASLNIMAICDLKMLFTYIWN-GAPGSCYDTAV-LQIAQQSDSEFP------LPPSE 261

Query: 255 FKTSYITAYNPLCNVIGFYYLHDIGYPNAKGFLASYKSQ-----RYHLQE 300
                             YYL D GYPN +G LA Y+S      RYH+ +
Sbjct: 262 -----------------KYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQ 284

The following BLAST results are available for this feature:

BLAST of MELO3C033291 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056137.1	5.6e-76	100.00	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14143.1 putative nucleas...	[more]
KAA0068124.1	5.3e-50	50.86	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036995.1	7.7e-49	49.59	retrotransposon protein [Cucumis melo var. makuwa] >TYK21210.1 retrotransposon p...	[more]
KAA0051057.1	1.7e-48	45.20	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0034843.1	2.2e-48	44.77	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033291 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQK7	2.7e-76	100.00	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7VL29	2.6e-50	50.86	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T686	3.7e-49	49.59	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U9H2	8.3e-49	45.20	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SWD8	1.1e-48	44.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C033291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43722.1	8.0e-04	25.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 168..207
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 92..168
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 168..207
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 92..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033291.1	MELO3C033291.1	mRNA