MELO3C032771 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032771
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein Ycf2-like
Location	chr07: 18267203 .. 18267879 (-)
RNA-Seq Expression	MELO3C032771
Synteny	MELO3C032771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGATCTAAAATAAAAGGTCTTCGATTCGCCAATGGTATGTAAATCTGGTAATTTGTAGGAGTTTTGATATTCATAACAATTTTAATATTTATAAAGTATTTTGTTTCTTTTTTAAACAGCTTGAAGTGTCCCTCATGCTCGCCATACCAAATGAAGTGGGAATGCCATACTTTACACCATTCCTCGAGGTAGAAAAAGATATACTCAAATAAGCAAAAGATGAGCTTCGAAAGACCCAAAATTCTGACCACGTAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTCAGATTGATGGTCTGACGAGAATGGTAGAAAAGATTAAGAAGAACCAAGAGAAGATGGAGAAAAGTATGAAGGGTATTTTTTATTTTCTTAAATCTATAGAATTGAAAATGAATACTCGGTTTGAAGAATTAGGACAGAATATGAATGGAATAATAGAAGCAATAAGGAGCCAACAACCTAGTTCTTCGAGTGCCTAAGACACCAATGAATTTATGGTAAACATGTACTGTAGACTTCAATAATTTGTGTGCATGTAACAGAATCTTAACAAATACATTGTATTTGGTATGTATTTGTTATGCAGAAAGCAAGGGCGTTTGAAGAGCACCTTGACAGGGTGGAATAGGACCAAGAAGAAGATGACGTTGAAGATTTGA

mRNA sequence

ATGGAAGGATCTAAAATAAAAGGTCTTCGATTCGCCAATGTGTCCCTCATGCTCGCCATACCAAATGAAGTGGGAATGCCATACTTTACACCATTCCTCGAGACCCAAAATTCTGACCACGTAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTCAGATTGATGGTCTGACGAGAATGGTAGAAAAGATTAAGAAGAACCAAGAGAAGATGGAGAAAAGTATGAAGGAATTGAAAATGAATACTCGAAAGCAAGGGCGTTTGAAGAGCACCTTGACAGGGTGGAATAGGACCAAGAAGAAGATGACGTTGAAGATTTGA

Coding sequence (CDS)

ATGGAAGGATCTAAAATAAAAGGTCTTCGATTCGCCAATGTGTCCCTCATGCTCGCCATACCAAATGAAGTGGGAATGCCATACTTTACACCATTCCTCGAGACCCAAAATTCTGACCACGTAGCCCATGTTTCGCTGAATAGAGGCATGCCCTCTACAAGTCAGATTGATGGTCTGACGAGAATGGTAGAAAAGATTAAGAAGAACCAAGAGAAGATGGAGAAAAGTATGAAGGAATTGAAAATGAATACTCGAAAGCAAGGGCGTTTGAAGAGCACCTTGACAGGGTGGAATAGGACCAAGAAGAAGATGACGTTGAAGATTTGA

Protein sequence

MEGSKIKGLRFANVSLMLAIPNEVGMPYFTPFLETQNSDHVAHVSLNRGMPSTSQIDGLTRMVEKIKKNQEKMEKSMKELKMNTRKQGRLKSTLTGWNRTKKKMTLKI

Homology

[Close]

BLAST of MELO3C032771 vs. NCBI nr
Match: KAA0041500.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK24373.1 protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 2.7e-17
Identity = 58/93 (62.37%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNEVG PYF PFLE               TQN DHVAHV LNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEVGRPYFAPFLEAEKDILEEAEDELRKTQNFDHVAHVLLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMK---------ELKMNTR 86
          +VEKI+K+Q++MEKSMK         EL+MNTR
Sbjct: 61 IVEKIEKSQQRMEKSMKGILNFLKSVELQMNTR 93

[Close]

BLAST of MELO3C032771 vs. NCBI nr
Match: KAA0041495.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK24369.1 protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-16
Identity = 52/77 (67.53%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNEVG PYF PFLE               TQNS+HVAHV LNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEVGRPYFAPFLEAEKDILEEAEDELRKTQNSNHVAHVLLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMK 79
          +VEKI+K+QE+MEKSM+
Sbjct: 61 IVEKIEKSQERMEKSME 77

[Close]

BLAST of MELO3C032771 vs. NCBI nr
Match: KAA0046008.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 5.1e-16
Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNE+G PYFTPFLE               +Q+SD VAHVSLNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEMGRPYFTPFLEAEKDILKEVEDELRKSQHSDCVAHVSLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMKE 80
          +VEKI+K QE+MEKSM+E
Sbjct: 61 IVEKIEKTQERMEKSMEE 78

[Close]

BLAST of MELO3C032771 vs. NCBI nr
Match: TYK13581.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 5.1e-16
Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNE+G PYFTPFLE               +Q+SD VAHVSLNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEMGRPYFTPFLEAEEDIVKEVEDELRKSQHSDCVAHVSLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMKE 80
          +VEKI+K QE+MEKSM+E
Sbjct: 61 IVEKIEKTQERMEKSMEE 78

[Close]

BLAST of MELO3C032771 vs. NCBI nr
Match: KAA0050355.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-15
Identity = 60/100 (60.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 10  RFANVSLMLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTS 69
           R   VS MLA PNEVGM YF PFLE               TQ SD VA+VSLNR MPSTS
Sbjct: 120 RALEVSPMLATPNEVGMSYFAPFLEAEKDILKEVEDELRKTQYSDCVAYVSLNRSMPSTS 179

Query: 70  QIDGLTRMVEKIKKNQEKMEKSMK---------ELKMNTR 86
           QIDGLTR+VEKI+K+QE MEKSM          ELKMNTR
Sbjct: 180 QIDGLTRIVEKIEKSQEMMEKSMDGILDFLKSVELKMNTR 219

[Close]

BLAST of MELO3C032771 vs. ExPASy TrEMBL
Match: A0A5A7TDY1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001570 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 58/93 (62.37%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNEVG PYF PFLE               TQN DHVAHV LNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEVGRPYFAPFLEAEKDILEEAEDELRKTQNFDHVAHVLLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMK---------ELKMNTR 86
          +VEKI+K+Q++MEKSMK         EL+MNTR
Sbjct: 61 IVEKIEKSQQRMEKSMKGILNFLKSVELQMNTR 93

[Close]

BLAST of MELO3C032771 vs. ExPASy TrEMBL
Match: A0A5A7TJ92 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001530 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 52/77 (67.53%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNEVG PYF PFLE               TQNS+HVAHV LNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEVGRPYFAPFLEAEKDILEEAEDELRKTQNSNHVAHVLLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMK 79
          +VEKI+K+QE+MEKSM+
Sbjct: 61 IVEKIEKSQERMEKSME 77

[Close]

BLAST of MELO3C032771 vs. ExPASy TrEMBL
Match: A0A5A7TT13 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005690 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.4e-16
Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNE+G PYFTPFLE               +Q+SD VAHVSLNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEMGRPYFTPFLEAEKDILKEVEDELRKSQHSDCVAHVSLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMKE 80
          +VEKI+K QE+MEKSM+E
Sbjct: 61 IVEKIEKTQERMEKSMEE 78

[Close]

BLAST of MELO3C032771 vs. ExPASy TrEMBL
Match: A0A5D3CP48 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00660 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.4e-16
Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 17 MLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTSQIDGLTR 76
          MLA PNE+G PYFTPFLE               +Q+SD VAHVSLNRGMPSTSQIDGLTR
Sbjct: 1  MLATPNEMGRPYFTPFLEAEEDIVKEVEDELRKSQHSDCVAHVSLNRGMPSTSQIDGLTR 60

Query: 77 MVEKIKKNQEKMEKSMKE 80
          +VEKI+K QE+MEKSM+E
Sbjct: 61 IVEKIEKTQERMEKSMEE 78

[Close]

BLAST of MELO3C032771 vs. ExPASy TrEMBL
Match: A0A5A7U9S5 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00860 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.1e-16
Identity = 60/100 (60.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 10  RFANVSLMLAIPNEVGMPYFTPFLE---------------TQNSDHVAHVSLNRGMPSTS 69
           R   VS MLA PNEVGM YF PFLE               TQ SD VA+VSLNR MPSTS
Sbjct: 120 RALEVSPMLATPNEVGMSYFAPFLEAEKDILKEVEDELRKTQYSDCVAYVSLNRSMPSTS 179

Query: 70  QIDGLTRMVEKIKKNQEKMEKSMK---------ELKMNTR 86
           QIDGLTR+VEKI+K+QE MEKSM          ELKMNTR
Sbjct: 180 QIDGLTRIVEKIEKSQEMMEKSMDGILDFLKSVELKMNTR 219

The following BLAST results are available for this feature:

BLAST of MELO3C032771 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041500.1	2.7e-17	62.37	protein Ycf2-like [Cucumis melo var. makuwa] >TYK24373.1 protein Ycf2-like [Cucu...	[more]
KAA0041495.1	2.3e-16	67.53	protein Ycf2-like [Cucumis melo var. makuwa] >TYK24369.1 protein Ycf2-like [Cucu...	[more]
KAA0046008.1	5.1e-16	66.67	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYK13581.1	5.1e-16	66.67	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0050355.1	1.5e-15	60.00	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032771 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDY1	1.3e-17	62.37	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00...	[more]
A0A5A7TJ92	1.1e-16	67.53	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00...	[more]
A0A5A7TT13	2.4e-16	66.67	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00...	[more]
A0A5D3CP48	2.4e-16	66.67	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5A7U9S5	7.1e-16	60.00	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G008...	[more]

BLAST of MELO3C032771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032771.1	MELO3C032771.1	mRNA