MELO3C032358 (gene) Melon (DHL92) v4

Overview
NameMELO3C032358
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr07: 4628651 .. 4629017 (-)
RNA-Seq ExpressionMELO3C032358
SyntenyMELO3C032358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGAGGAGATACATAATATGTACGATGTACGTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTTGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCGTAATGTGGAAGAAGTGCTTCCTACGACACAAACATAGAACCAAACTGGTTATGGTAGTCCGATGACGATGATGCCAACATTTGGAGCAGGATATTATGATTATGAGGTTGGTACAGGATATTATGATGTGGGGGTCGGTCCATTGTCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGATGTGGCTATGGGGAACATAACGAATATTTGTGTGAAGCACTTGCAGATGTATCATATCAACAAGAG

mRNA sequence

ATAGAGGAGATACATAATATGTACGATGTACGTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTTGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCGTAATGTGGAAGAAGTGCTTCCTACGACACAAACATAGAACCAAACTGGTTATGGTAGTCCGATGACGATGATGCCAACATTTGGAGCAGGATATTATGATTATGAGGTTGGTACAGGATATTATGATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGATGTGGCTATGGGGAACATAACGAATATTTGTGTGAAGCACTTGCAGATGTATCATATCAACAAGAG

Coding sequence (CDS)

ATGATTATGAGGTTGGTACAGGATATTATGATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGATGTGGCTATGGGGAACATAACGAATATTTGTGTGAAGCACTTGCAGATGTATCATATCAACAAGAG

Protein sequence

MIMRLVQDIMMDVGPSTSYMHGHGCGYGEHNEYLCEALADVSYQQE
Homology
[Close]
BLAST of MELO3C032358 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-06
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 11  MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
           MDVGPS SYMHGHG GYGEHNEYL  EA ADVS +QE
Sbjct: 80  MDVGPSNSYMHGHGRGYGEHNEYLYHEAPADVSDRQE 116

[Close]
BLAST of MELO3C032358 vs. NCBI nr
Match: KAA0054357.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK12395.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 7.7e-06
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 9   IMMDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
           + MDVGPS SYMHGHG GYGEHN+YL  EA ADVS +QE
Sbjct: 217 LYMDVGPSNSYMHGHGRGYGEHNQYLYHEAPADVSDRQE 255

[Close]
BLAST of MELO3C032358 vs. NCBI nr
Match: KAA0064193.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK02836.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 7.7e-06
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 11 MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
          MDVGPSTSYMHGHG GY EHN+YL  EA AD+S QQE
Sbjct: 32 MDVGPSTSYMHGHGRGYEEHNKYLYHEASADISDQQE 68

[Close]
BLAST of MELO3C032358 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 11  MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
           MDVGPSTSYM+GHG GYGEHNEYL  EA  DVS +QE
Sbjct: 429 MDVGPSTSYMYGHGRGYGEHNEYLYHEAPTDVSDRQE 465

[Close]
BLAST of MELO3C032358 vs. NCBI nr
Match: TYK16354.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 11  MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVS 43
           M+VGPS SYMHGHG GYGEHNEYL  EALADVS
Sbjct: 80  MNVGPSASYMHGHGRGYGEHNEYLYHEALADVS 112

[Close]
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 11  MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
           MDVGPS SYMHGHG GYGEHNEYL  EA ADVS +QE
Sbjct: 80  MDVGPSNSYMHGHGRGYGEHNEYLYHEAPADVSDRQE 116

[Close]
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match: A0A5A7UIF6 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001780 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 9   IMMDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
           + MDVGPS SYMHGHG GYGEHN+YL  EA ADVS +QE
Sbjct: 217 LYMDVGPSNSYMHGHGRGYGEHNQYLYHEAPADVSDRQE 255

[Close]
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match: A0A5A7V7U8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00310 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 11 MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
          MDVGPSTSYMHGHG GY EHN+YL  EA AD+S QQE
Sbjct: 32 MDVGPSTSYMHGHGRGYEEHNKYLYHEASADISDQQE 68

[Close]
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.3e-06
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 11  MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVSYQQE 47
           MDVGPSTSYM+GHG GYGEHNEYL  EA  DVS +QE
Sbjct: 429 MDVGPSTSYMYGHGRGYGEHNEYLYHEAPTDVSDRQE 465

[Close]
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match: A0A5D3CZG9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001380 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.3e-06
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 11  MDVGPSTSYMHGHGCGYGEHNEYLC-EALADVS 43
           M+VGPS SYMHGHG GYGEHNEYL  EALADVS
Sbjct: 80  MNVGPSASYMHGHGRGYGEHNEYLYHEALADVS 112

The following BLAST results are available for this feature:
BLAST of MELO3C032358 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049532.13.4e-0681.08GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0054357.17.7e-0674.36serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0064193.17.7e-0678.38GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
TYK23842.11.3e-0578.38serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK16354.11.3e-0584.85GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
BLAST of MELO3C032358 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CXX31.7e-0681.08GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7UIF63.7e-0674.36Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7V7U83.7e-0678.38GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5D3DJV76.3e-0678.38Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3CZG96.3e-0684.85GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
BLAST of MELO3C032358 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032358.1MELO3C032358.1mRNA