MELO3C032228 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATAAGAAGCCAAAAAACTCAAAAGGAGGCGCAAAACGAAGTGACTGTTAAGGAGTGCAGGTCAAGATGAACCTAAAATTCCTTCAGCCACCTACACATATGAAGCCCTTTTATTGAGGGATTTGACCCTTTTATGATAGCCTACTTAGTGAAATAAACAAGCCTGGAGGACGGGTCATTTACAGGTATTTCTACAGCTTGTTCTTCGTTGATAGTCTTTATTTAAGATGTGGATTTCCCACGATCTGCCCATAGGCAGCCGCACATACAACTGTATAAGGTTGCCACGATCCTCTTCTCTTGCAAGTCTTCTAAGCTGGAATAGAAGTTGAACGACATTACGTGTTTTGACCAAGGGATGTCCTTATTAGTGAAGCTTTCTAGAATCCGGTTTTCCCAATGGGTACATTAGCCTTTTTGAGAAAAGTTCTCTTACACTTTTCATCTAGCCTGCACTCTTGCCGAGTAGGTGAGTCTCACATGAATATAGCCTCCGCGCTGCTCCATAAGGTTTTTGGTGTACTTAGCGAACCATAGACAAAGAGCTACTTTGTCTTTATAGACCTCTAGAAGACAAGGTTTATGGCTATCCAATCTAGCATTTTTTACTTTTCTTCCAAGAGCTCCGTGGTCTATTCTTGGGCCGCCCTTTCCCTGAGAGATAGGTTACTCGTAGTTCCATAGCTGATATCTCCTACATCTTTATGCGCTGTGAGTCTTTCCATCCTCACAGTGCTGTATTTGGATAAGAGGAGCTCCGCAATCTCCAGATCTTTCCTTAAATGTAGGAAATTGTCGTCATTATCTATCTTTTGGAAAATCCACTTCATACGATCCTGCTTGAGTGTCGTGCTCATGACCGACATCCTTCTATGCTTTCTGGAAGCTTCGACTTCCCTTAATATGTTATTTAGGGAGAACTTTCGCCAGACGTAGGGGCTCCTGTCTTGCTTTGTAACATAGCCACAAAGGGTGCTCCAACCCTTATTCAAGGTGACACAATATTGTTTGCCATCCCATTCATGTAAGACTTCTTTTATTCGAGTTATCGCATTATGTTTTGAACCATTCACATTAAGTAGAGCAATATGATGATGTCACTCTTCGTCCTGGTGCTTTTCTTATTTAATTTGTGTACACACTCATAGGGCTTTCAACTTCACTTCTATAATATTAGTGGATAAACAAGGGTTCTGATGACAGGGTAGAATTCCCTTTCTTTTGTCTCTTCTCGATTGGGACAGAGTGATAAGCATGAACCTTCTCATGGAGCGGTGACTTGAAGGTAGGTTCTTAGTGTCGTTAGATTGCATTATTTTTCCTTTATATTAGAGAGAAATTTCTTGGCTAGCGCTGTAAACCCGATATTTTCTTGGTTTAATTTCTTTAAATGTGGAAAAGAAAAGAAAAGAAGATGGAAATTAAGTGTATATATATATATATATATATATATATATATATATATATAATGGTTTTATTAAGTAAAATAAAGAAAAGAAAGAAAAGAAAGGATAAAAGGAAAAAAAAAAGAGAAGAAAATTTCATTTTTTCTTTTCTTCTTCTTCTTTTCCCTTCATCGCCAAACTTTTTGAAGAAAAGTTCTCATCAATTTTCCATTTTTCCTTCTTCAATTTACAGAGAACATTTAAGAGAGAGTTTGGAAGGAAGAAGAAGAGGAATTTTACTAGAGTTTTGAGGTTGAAGAAGAGGAGACTCAAGCAAAGTGTATCCATGGCTGAATCTTGGTTCATTCTGCACATCACTTGTTTTTAATTCGATTAGAACTCTTCAAAAGGAATTAAGAGGTGAGGTTTAAACTTACTGAAAGATAACTCATTTTCAAACAAATTTTATGAAGAAAGTTGGAGCAAATTCGGATATTCATTGGGTGCTTTTTGATGAAGAAAACAGGGCAGTTTGTTTTCACCCGAAATCAGAAGGACTCTGGGTTTTCTTGTATTTCAGAGTGTACTGGTGGAGTTAGGATCTCTATTTGGTTTGGTTTGAAAGCTTATTCAATTTACTACAACTTTCATGAAGTAATCGTGAACCAAAAACGACTAAAAAAAGTTAAATTGTAGGGACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTTGAAGTTGTTCTGTTTCGAGGGTTATCTGAGTTTATTCACAGGGAATCAGATTTACATGTCTTCAGGTTAGTTTTAGAGGACCTCAAAATGAAGATTTTGATATAAAGAACACTCTTTTTGTTAATTGTTGAGGAATTTATAGTCATTTGAAGTTTATGTTAGAAAGCTGGAAATTTCATAGAGTTGTTGAAATAGGATTTTATTTCTTAAGTTTTGTTTTCATGAGCGTCATCTTTAGTGCGACATGTTATGTATATCTTTAGAAAACCTGAATGTTCAGAGTTCTAATACTCGGTTGGGTTGTTGGCAGGCCGAGAAGAATTAAACCGAGCTTATAGACCAATGATCTAGTCCAAGACTGTGAGTGACAAAACCAATTTTGAAATATTTTTCATAACTATTACTTACGATTGAATGCGATGAATGTTTATTTCCAAAATCATGAAAGGTCTTTGAATTTCATGATTATTTTCAAGTATATGTTTGGAAACTAGATTTCTTAATGAAATTTATGCTAGCATGTGGATATTAAATGTTTGGAAAGTATTTAAACCACCATGTTTTAAGCAAAGCATGAATTAGTAAAAAGTTTTGTTTTAAGAGCTACAGCTTTCCATGAAAGAGCCGAGTAAAGTTTGAGCTCTGTGTAAAATTTATAAGCATGCACGTTTTAATATTTTTAGACGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACATTAGTTAGATTCCGTTGTTGACGTTGAGTATACTCTGTAACAACGATGCTGTCGTGAGTGTGGAGGGGCCCCACTACGTCAAAGACGATAGGAGTGCTAGGTGGGCCCCACTACATCGTAGAGCTTGTAAAGGTTGTTGTACTGGGTGTACCCTACACAACGTAGATTTGTCATGTTAGTTAAAATGCTTTGATATACTTGATATGCCTTGCTAGATTTCAATGACGAACATGCTGAGTATTTGAGAAAGCTATTCTTACTACTACACGTTTACATTTACGACTTGTATAAACAGATTTATATGTGAAAAGTTTTCACGTGCTCTTATCTTTAAATTTATAGTTTTAAACGGAGGCACTCATTGAGCTTTATAGCTCACTCTTTCCAAAATGTTTTACCCATTTTTCAGGTAAAGATCGAGTTCCTGGTGCCTGATAGACTGCCTTAGTCTGCTGAAGCTCCGTTATCGATTGTCAGTACGTGTTTTGAGTTGGGCATAGAGTCTGTTGTGTTATGATGTATATACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGCTTCAGGAGCTGCGGTCTGTAAATTTTTGTTGGTTATATTTTGATTAAGGTGTCTTTAGGTTTACTCGTGAAATCAGTTAATTCCGAGG ATGTCAATAAGAAGCCAAAAAACTCAAAAGGAGGCGCAAAACGAAGTGACTGTTAAGGAGTGCAGCCTGCACTCTTGCCGAGTAGGTGAGTCTCACATGAATATAGCCTCCGCGCTGCTCCATAAGGGAGAACTTTCGCCAGACGTAGGGGCTCCTGTCTTGCTTTGTAACATAGCCACAAAGGGTGCTCCAACCCTTATTCAAGAGAGAAATTTCTTGGCTAGCGCTGTAAACCCGATATTTTCTTGGTTTAATTTCTTTAAATGTGGAAAAGAAAAGAAAAGAAGATGGAAATTAAGTAGAACATTTAAGAGAGAGTTTGGAAGGAAGAAGAAGAGGAATTTTACTAGAGTTTTGAGGTTGAAGAAGAGGAGACTCAAGCAAAAAAGTTGGAGCAAATTCGGATATTCATTGGGTGCTTTTTGATGAAGAAAACAGGGCAGTTTGTTTTCACCCGAAATCAGAAGGACTCTGGGTTTTCTTGTATTTCAGAGTGTACTGGTGGAGTTAGGATCTCTATTTGGTTTGGTTTGAAAGCTTATTCAATTTACTACAACTTTCATGAAGGACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTTGAAGTTGTTCTGTTTCGAGGGTTATCTGAGTTTATTCACAGGGAATCAGATTTACATGTCTTCAGAGCTACAGCTTTCCATGAAAGAGCCGAGTAAAATTCCGTTGTTGACGTTGAGTATACTCTGTAACAACGATGCTGTCGTGAGTGTGGAGGGGCCCCACTACGTCAAAGACGATAGGAGTGCTAGGTGGGCCCCACTACATCGTAGAGCTTGTAAAGGTTGTTGTACTGGGTGTACCCTACACAACATACTCCACAGTTTGTATAAGCTTCAGGAGCTGCGGTCTGTGTCTTTAGGTTTACTCGTGAAATCAGTTAATTCCGAGG ATGAAGAAAACAGGGCAGTTTGTTTTCACCCGAAATCAGAAGGACTCTGGGTTTTCTTGTATTTCAGAGTGTACTGGTGGAGTTAGGATCTCTATTTGGTTTGGTTTGAAAGCTTATTCAATTTACTACAACTTTCATGAAGGACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTTGAAGTTGTTCTGTTTCGAGGGTTATCTGAGTTTATTCACAGGGAATCAGATTTACATGTCTTCAGAGCTACAGCTTTCCATGAAAGAGCCGAGTAAAATTCCGTTGTTGACGTTGAGTATACTCTGTAACAACGATGCTGTCGTGAGTGTGGAGGGGCCCCACTACGTCAAAGACGATAGGAGTGCTAGGTGGGCCCCACTACATCGTAGAGCTTGTAAAGGTTGTTGTACTGGGTGTACCCTACACAACATACTCCACAGTTTGTATAAGCTTCAGGAGCTGCGGTCTGTGTCTTTAGGTTTACTCGTGAAATCAGTTAATTCCGAG MKKTGQFVFTRNQKDSGFSCISECTGGVRISIWFGLKAYSIYYNFHEGQVKEVVCARFLKLFCFEGYLSLFTGNQIYMSSELQLSMKEPSKIPLLTLSILCNNDAVVSVEGPHYVKDDRSARWAPLHRRACKGCCTGCTLHNILHSLYKLQELRSVSLGLLVKSVNSE Homology
BLAST of MELO3C032228 vs. NCBI nr
Match: KAA0035470.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 4.8e-13 Identity = 46/75 (61.33%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of MELO3C032228 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 8.1e-13 Identity = 53/114 (46.49%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of MELO3C032228 vs. NCBI nr
Match: KAA0035073.1 (uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12 Identity = 67/165 (40.61%), Postives = 76/165 (46.06%), Query Frame = 0
BLAST of MELO3C032228 vs. NCBI nr
Match: KAA0042134.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12 Identity = 53/111 (47.75%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MELO3C032228 vs. NCBI nr
Match: KAA0032946.1 (uncharacterized protein E6C27_scaffold269G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-10 Identity = 49/112 (43.75%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of MELO3C032228 vs. ExPASy TrEMBL
Match: A0A5A7SWQ7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001170 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13 Identity = 46/75 (61.33%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of MELO3C032228 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.9e-13 Identity = 53/114 (46.49%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of MELO3C032228 vs. ExPASy TrEMBL
Match: A0A5A7SX02 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001380 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 5.1e-13 Identity = 67/165 (40.61%), Postives = 76/165 (46.06%), Query Frame = 0
BLAST of MELO3C032228 vs. ExPASy TrEMBL
Match: A0A5A7TFC5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006220 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 5.1e-13 Identity = 53/111 (47.75%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of MELO3C032228 vs. ExPASy TrEMBL
Match: A0A5A7SSI1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00200 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 6.3e-11 Identity = 49/112 (43.75%), Postives = 59/112 (52.68%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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