MELO3C032216 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACACGGATCTTAAATGTCGGTTTTTAAAATACGGATCTTTAATGTAGGTTTTAAACCGACATCAAAGATGAGGGTACAATGTCGGTTTTAAACCGACATTAAAGACATGATTCTTTGAAAACCGACATTGAAGGTACATTTATTGATAACTTTAATTTTTTGATTTAATATAAAGCAATAATTTTACCAAATCTTCTCCATTACTTTTCTTCTCTCCCCAGAACTCTTTCTTTCATGCCATCGTTTCATCATCCTCTAAACCTTAAAATCATCACTGTCGTGCTCCAACATCCATCGTTGCGCTCGACGCTCCACCATCCGCTGGTTAGTCTCGCCATATCCTTAAAGTTTTTTATCATTTCCTCAAGTTTTCTTCTCTCTTCTTTCACATTCTCCCTATAAACGCTCCTCACGCCAAAATCCTTGAGATCCGTTCGCAAGTCCACTAGTATGATCAGGTATCCCGGTAATTTTTGTTTTGCTCGAGTGATCTTACCTATATGTTTTGGGATTGTAGTAGATTGGAAGCTGTGTTCTAATAGGTAGGTGTAGGTATTATATGTTAGATTTCCGATTTGGGATGTAAATTACATATGTAGAAATATGATCGATCACATTATTTTTTAGTATTTTTCCTGAAACTTACGATTAGGAATTTGGAAGAATTGAACCCTAAGACAGAATGATATTAATTTCTATGATTAGCGAGGATTATAGTGGTTTGATTTCAGCTGTGGTTGATGGGGACAAGGGAAGAGGGCACACCTTCTAAAACTCTGAAACCTCCCTCTTCATCCCAGGTGATATAATTAACCTTCCTTCCTTTTGCCTATTTTCATTCCCAAGTTGTTGATACATTGATATTTTTTTACTTGTTACGCATAAGGAATAGCTCCAACACCTTCATATCCTGATTGGTCAAGCTCAGTGCAGGTCTATCTATATGGTTTTTTGATTTCATACTAATTGTTGTTTGGATTCATAATCACCTAGAATAGTAAAATTCAAACACTTAAAATAGTAACGAAGATGTCGATGAATACTACTGGCTTAAAGTTTGGCCTCTTCTGTAACTGTAGGCTTATTATAGTGTTGGTGCTACTCCACCTCCATTCTTTGCATCTACTATTGCTTCTCCAACTCCCCACCCTTACATCTGGGGAGGTCAGGTAATTATAATTTTCTATTGTCCCTATGAAATTTTATGGAGTTTGATATTTTCCAGAGAGGAGAAGATAATAATGTTCCTATTTTCTTAATTTTATGTTATATTTTTCAGCATCCTTTGATGTTACCTTATGGGACTCCAGTACCTTATCCAGCTATATATCCTCCTAGGGAGTTTATGCCCATCCCAATATCATTGTGGTAATCACCCTTTTATATTATAGGCTAGTGGATTTTATTTATATTCAAATCAACGAATCTTTTTTTCTCCATAGTTTCATCTTAATATCATTTGCTCTTTACCTGACCATTCCTTCTTAAATACCCACAAAATCATTAGACCGAAATAGAAGGATTAAGTTAGTCCTTGATATAATTGTTCCTTTTTTTTTTCTTTTGTAGACTCCTGGCTCTGTTCCGAT ATGAACACGGATCTTAAATGTCGCAATAATTTTACCAAATCTTCTCCATTACTTTTCTTCTCTCCCCAGAACTCTTTCTTTCATGCCATCGTTTCATCATCCTCTAAACCTTAAAATCATCACTGTCGTGCTCCAACATCCATCGTTGCGCTCGACGCTCCACCATCCGCTGCTGTGGTTGATGGGGACAAGGGAAGAGGGCACACCTTCTAAAACTCTGAAACCTCCCTCTTCATCCCAGGCTTATTATAGTGTTGGTGCTACTCCACCTCCATTCTTTGCATCTACTATTGCTTCTCCAACTCCCCACCCTTACATCTGGGGAGGTCAGCATCCTTTGATGTTACCTTATGGGACTCCAACTCCTGGCTCTGTTCCGAT ATGCCATCGTTTCATCATCCTCTAAACCTTAAAATCATCACTGTCGTGCTCCAACATCCATCGTTGCGCTCGACGCTCCACCATCCGCTGCTGTGGTTGATGGGGACAAGGGAAGAGGGCACACCTTCTAAAACTCTGAAACCTCCCTCTTCATCCCAGGCTTATTATAGTGTTGGTGCTACTCCACCTCCATTCTTTGCATCTACTATTGCTTCTCCAACTCCCCACCCTTACATCTGGGGAGGTCAGCATCCTTTGATGTTACCTTATGGGACTCCAACTCCTGGCTCTGTTCCG MPSFHHPLNLKIITVVLQHPSLRSTLHHPLLWLMGTREEGTPSKTLKPPSSSQAYYSVGATPPPFFASTIASPTPHPYIWGGQHPLMLPYGTPTPGSVP Homology
BLAST of MELO3C032216 vs. NCBI nr
Match: KAA0060604.1 (G-box-binding factor 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 148.7 bits (374), Expect = 2.7e-32 Identity = 78/99 (78.79%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of MELO3C032216 vs. NCBI nr
Match: TYK02267.1 (G-box-binding factor 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 141.7 bits (356), Expect = 3.3e-30 Identity = 71/95 (74.74%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of MELO3C032216 vs. NCBI nr
Match: KAA0042213.1 (G-box-binding factor 1 isoform X1 [Cucumis melo var. makuwa] >TYK26783.1 G-box-binding factor 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25 Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MELO3C032216 vs. NCBI nr
Match: XP_011658003.1 (G-box-binding factor 1 isoform X1 [Cucumis sativus] >XP_011658004.1 G-box-binding factor 1 isoform X1 [Cucumis sativus] >XP_031743230.1 G-box-binding factor 1 isoform X1 [Cucumis sativus] >XP_031743231.1 G-box-binding factor 1 isoform X1 [Cucumis sativus] >KGN48813.1 hypothetical protein Csa_004118 [Cucumis sativus]) HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20 Identity = 54/78 (69.23%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of MELO3C032216 vs. NCBI nr
Match: XP_031743232.1 (G-box-binding factor 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20 Identity = 54/78 (69.23%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy Swiss-Prot
Match: P42774 (G-box-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=GBF1 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-13 Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy Swiss-Prot
Match: Q99091 (Light-inducible protein CPRF3 OS=Petroselinum crispum OX=4043 GN=CPRF3 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09 Identity = 36/77 (46.75%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy Swiss-Prot
Match: Q99089 (Common plant regulatory factor 1 OS=Petroselinum crispum OX=4043 GN=CPRF1 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04 Identity = 21/45 (46.67%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy TrEMBL
Match: A0A5A7UZZ1 (G-box-binding factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004820 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32 Identity = 78/99 (78.79%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy TrEMBL
Match: A0A5D3BS81 (G-box-binding factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00680 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30 Identity = 71/95 (74.74%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy TrEMBL
Match: A0A5A7TG63 (G-box-binding factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00830 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26 Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy TrEMBL
Match: A0A0A0KGY0 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502020 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 5.2e-21 Identity = 54/78 (69.23%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of MELO3C032216 vs. ExPASy TrEMBL
Match: A0A1S3B1P8 (G-box-binding factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485031 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.7e-21 Identity = 54/78 (69.23%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of MELO3C032216 vs. TAIR 10
Match: AT4G36730.1 (G-box binding factor 1 ) HSP 1 Score: 77.4 bits (189), Expect = 7.1e-15 Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of MELO3C032216 vs. TAIR 10
Match: AT4G36730.2 (G-box binding factor 1 ) HSP 1 Score: 77.4 bits (189), Expect = 7.1e-15 Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of MELO3C032216 vs. TAIR 10
Match: AT2G35530.1 (basic region/leucine zipper transcription factor 16 ) HSP 1 Score: 42.4 bits (98), Expect = 2.5e-04 Identity = 27/66 (40.91%), Postives = 33/66 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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