MELO3C031894 (gene) Melon (DHL92) v4

Overview
NameMELO3C031894
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionSerine/threonine-protein kinase TOR
Locationchr06: 9174893 .. 9176738 (-)
RNA-Seq ExpressionMELO3C031894
SyntenyMELO3C031894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGCAAAGCTCTTTATTCAAGCTTTATTTTAGCATATACTATGTTAGTTAAAAGGAACCATTTATCATGCTTTTCTCATTTCTTTGATTAAGCTATTTTTACTAGTTTATGTGCTTATTTTCTCCAACTCACCACATAACGTCTTTGTACCTTCTTCAGGACATCCTCCGTCTTCTCACTTTATGTTTCAACCATGGAGCCACTGCAAAAAGGATTTGCTCATGTAAATATCAACACGTGGCTTGTAGTCTTACCTTAGATAATTGCAAGGATACATTCAAATAATCATGCAGTAAGAGAGCTTATACAGTCACTATCGGTCAGAATTGGGCAAAGCCATCCTCAAGTTTGTTTCCTATATCATCCTTTTGCATTATGTTTAGGTTTGGGTAGGTACATCAGGGTTTCCTATGCACATGAGATTTTCCTTCTCTTCATAAAAATTTGAATTACTGGGTTGCTGTGTGCAATTTGGAATTTACATCTTTTATTTATTTCAATTCATAATAATAGTTAATTGAATAGGCATCCTCCATATTGATCTTTAGGTTATTTTGCTCATTGTATAATTTTCTTGTACTATGAACTTAAATCTCATTTTTATCTAACAAGAGAGGTTTATTTCCCTTAAAAAAAAAGGAATAGACATCCTGCATAACTCTTACTTAGATTTTGGGGATAAGCTCAAAACAACATTTTTGCAACAAAAGACACTATACTAATGAATCCCATATGGAATTGTTAAAAGTCCTTAATCCAAGAGGCAGTGGAACTTCCCAAATCCCAGGCCCAAAAGACCTACAAAATGAAAATCAAAGCACATACTGGGAGCAGTAACATCAAATTTTGTCGACATATAACTTTTTTTGCTACTTGTATTTAGTGAGGTGCCTAGTCATAAGTTTACTAGAGCCAAGCATTCATTGGTTTAATTAAATTGTTACGAGTCATTAAGATATTTGGATATCTGAACCTTGTTATAATTCTTGATCTCTTTTTCATAATCCACTGGTTGGTAAAATCGACATAAGGTCAAGCTCCTAAAGAAATAGACTGCTTCACAATAGAATGAGGTTCATTTTGCTGGTTAATGATCTATAGTCTTTCCTTGCATTACTATTCTCTCTTGTGATTGCTTTGGAGATTGAATTTTTTTTTCATGGAAAGGTGTCCAGCGGGATGACATTTTCTTGAAGTGTTAAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTTTTTTATTTTAACAGGCTCTCATGTACCCTCTTCTTGTAGCATGTAAATAGATTAGCAATTTAAAGTAAAATAGATTTTTAGATTATTTTACTTCTGGCCTCATTTAATAATTGATCTATACATACTTTTACTTGTAGGCTCAACTTTTATCTAAAGAATTGATTCGATTTGCCATAATTTGGCATGAAACATGGCATGAGGCTCTAGAGAAGGCTAGTCGTTTGTACTTTGGTGAACATAACATTCATAAGAGTTGAATTGTTCATATGAAGGGGGGAGGTTGATAGGTGAATTGTTCATAAGAGTTGAATTGTTCTGAAACTTTGTTGTGGTAGTCATTTTGAAACTTTGTTGTGGTTGCCATTATGAAATTTTATGTATATAGATGATATACTTTTGGGCTAAGTTAGTTAATTAGAGGATGTTGAGTTGAATTCTTGGAAATCTGATAGAATTGTTTATATTGGTTTTGTAAATGATATGAATCAAAGTTTTGGAAATGATATGGTGAAAGGTTTTATATTTGATGAATATTATCGTTTATATGTATTTATGGAACAATTGTTGGATCACTATACAGGACTAATGGGAGAGTAA

mRNA sequence

ATGAGTTGCAAAGCTCTTTATTCAAGCTTTATTTTAGCATATACTATGACATCCTCCGTCTTCTCACTTTATGTTTCAACCATGGAGCCACTGCAAAAAGGATTTGCTCATATTTTGGGGATAAGCTCAAAACAACATTTTTGCAACAAAAGACACTATACTAATGAATCCCATATGGAATTGTTAAAAGTCCTTAATCCAAGAGGCAGTGGAACTTCCCAAATCCCAGGCCCAAAAGACCTACAAAATGAAAATCAAAGCACATACTGGGAGCATGAGGTGCCTAGTCATAAGTTTACTAGAGCCAAGCATTCATTGGCTCTCATGTACCCTCTTCTTGCTCAACTTTTATCTAAAGAATTGATTCGATTTGCCATAATTTGGCATGAAACATGGCATGAGGCTCTAGAGAAGGCTAGTCAGGATGTTGAGTTGAATTCTTGGAAATCTGATAGAATTGTTTATATTGGTTTTGTAAATGATATGAATCAAAGTTTTGGAAATGATATGGTGAAAGGTTTTATATTTGATGAATATTATCGTTTATATGTATTTATGGAACAATTGTTGGATCACTATACAGGACTAATGGGAGAGTAA

Coding sequence (CDS)

ATGAGTTGCAAAGCTCTTTATTCAAGCTTTATTTTAGCATATACTATGACATCCTCCGTCTTCTCACTTTATGTTTCAACCATGGAGCCACTGCAAAAAGGATTTGCTCATATTTTGGGGATAAGCTCAAAACAACATTTTTGCAACAAAAGACACTATACTAATGAATCCCATATGGAATTGTTAAAAGTCCTTAATCCAAGAGGCAGTGGAACTTCCCAAATCCCAGGCCCAAAAGACCTACAAAATGAAAATCAAAGCACATACTGGGAGCATGAGGTGCCTAGTCATAAGTTTACTAGAGCCAAGCATTCATTGGCTCTCATGTACCCTCTTCTTGCTCAACTTTTATCTAAAGAATTGATTCGATTTGCCATAATTTGGCATGAAACATGGCATGAGGCTCTAGAGAAGGCTAGTCAGGATGTTGAGTTGAATTCTTGGAAATCTGATAGAATTGTTTATATTGGTTTTGTAAATGATATGAATCAAAGTTTTGGAAATGATATGGTGAAAGGTTTTATATTTGATGAATATTATCGTTTATATGTATTTATGGAACAATTGTTGGATCACTATACAGGACTAATGGGAGAGTAA

Protein sequence

MSCKALYSSFILAYTMTSSVFSLYVSTMEPLQKGFAHILGISSKQHFCNKRHYTNESHMELLKVLNPRGSGTSQIPGPKDLQNENQSTYWEHEVPSHKFTRAKHSLALMYPLLAQLLSKELIRFAIIWHETWHEALEKASQDVELNSWKSDRIVYIGFVNDMNQSFGNDMVKGFIFDEYYRLYVFMEQLLDHYTGLMGE
Homology
[Close]
BLAST of MELO3C031894 vs. ExPASy Swiss-Prot
Match: Q0DJS1 (Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica OX=39947 GN=TOR PE=1 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-05
Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 114  AQLLSKELIRFAIIWHETWHEALEKASQ 142
            AQL+SKELIR AI+WHE WHEALE+AS+
Sbjct: 1904 AQLVSKELIRVAILWHEMWHEALEEASR 1931

[Close]
BLAST of MELO3C031894 vs. ExPASy Swiss-Prot
Match: Q9FR53 (Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana OX=3702 GN=TOR PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 103  KHSLALMYPLLAQLLSKELIRFAIIWHETWHEALEKASQ 142
            +HS AL+    AQL+S ELIR AI+WHE WHEALE+AS+
Sbjct: 1905 QHSGALVDQ--AQLVSHELIRVAILWHEMWHEALEEASR 1941

[Close]
BLAST of MELO3C031894 vs. ExPASy TrEMBL
Match: A0A4S8MRS4 (Serine/threonine-protein kinase TOR OS=Dendrothele bispora (strain CBS 962.96) OX=1314807 GN=K435DRAFT_816285 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.8e-04
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 104  HSLALMYPLLAQLLSKELIRFAIIWHETWHEALEKASQ 142
            H  AL+YPL A ++S E+IR AI+WHE WHE LE+AS+
Sbjct: 1746 HPQALIYPLTALVVSNEIIRIAILWHEQWHEGLEEASR 1783

[Close]
BLAST of MELO3C031894 vs. ExPASy TrEMBL
Match: A0A1U8Q1A0 (Serine/threonine-protein kinase TOR OS=Nelumbo nucifera OX=4432 GN=LOC104589114 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.8e-04
Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0 

Query: 31   LQKGFAHI---LGISSKQHFCNKRHYTNESHMELLKVL-------NPRGSGTSQIPGPKD 90
            LQKGFAH+     +        + H  N +  EL++ L       +P+      +   K 
Sbjct: 1823 LQKGFAHVNIDTWLVVLPQIIARIHSNNHAVRELIQSLLVRIGRAHPQALMYPLLVACKS 1882

Query: 91   LQNENQSTYWE--HEVPSHKFTRAKHSLALMYPLLAQLLSKELIRFAIIWHETWHEALEK 142
            + N  ++   E   +V  H  T             AQL+SKELIR AI+WHETWHEALE+
Sbjct: 1883 ISNLRRAAAQEVVDKVRQHSGTLVDQ---------AQLVSKELIRVAILWHETWHEALEE 1936

[Close]
BLAST of MELO3C031894 vs. ExPASy TrEMBL
Match: A0A1U7YYD4 (Serine/threonine-protein kinase TOR OS=Nelumbo nucifera OX=4432 GN=LOC104589114 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.8e-04
Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0 

Query: 31   LQKGFAHI---LGISSKQHFCNKRHYTNESHMELLKVL-------NPRGSGTSQIPGPKD 90
            LQKGFAH+     +        + H  N +  EL++ L       +P+      +   K 
Sbjct: 1822 LQKGFAHVNIDTWLVVLPQIIARIHSNNHAVRELIQSLLVRIGRAHPQALMYPLLVACKS 1881

Query: 91   LQNENQSTYWE--HEVPSHKFTRAKHSLALMYPLLAQLLSKELIRFAIIWHETWHEALEK 142
            + N  ++   E   +V  H  T             AQL+SKELIR AI+WHETWHEALE+
Sbjct: 1882 ISNLRRAAAQEVVDKVRQHSGTLVDQ---------AQLVSKELIRVAILWHETWHEALEE 1935

[Close]
BLAST of MELO3C031894 vs. TAIR 10
Match: AT1G50030.1 (target of rapamycin )

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-06
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 103  KHSLALMYPLLAQLLSKELIRFAIIWHETWHEALEKASQ 142
            +HS AL+    AQL+S ELIR AI+WHE WHEALE+AS+
Sbjct: 1905 QHSGALVDQ--AQLVSHELIRVAILWHEMWHEALEEASR 1941

[Close]
BLAST of MELO3C031894 vs. TAIR 10
Match: AT1G50030.2 (target of rapamycin )

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-06
Identity = 25/39 (64.10%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 103  KHSLALMYPLLAQLLSKELIRFAIIWHETWHEALEKASQ 142
            +HS AL+    AQL+S ELIR AI+WHE WHEALE+AS+
Sbjct: 1878 QHSGALVDQ--AQLVSHELIRVAILWHEMWHEALEEASR 1914

The following BLAST results are available for this feature:
BLAST of MELO3C031894 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C031894 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0DJS12.0e-0578.57Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
Q9FR531.3e-0464.10Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana OX=3702 GN=TOR PE=1 ... [more]
BLAST of MELO3C031894 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4S8MRS48.8e-0460.53Serine/threonine-protein kinase TOR OS=Dendrothele bispora (strain CBS 962.96) O... [more]
A0A1U8Q1A08.8e-0434.15Serine/threonine-protein kinase TOR OS=Nelumbo nucifera OX=4432 GN=LOC104589114 ... [more]
A0A1U7YYD48.8e-0434.15Serine/threonine-protein kinase TOR OS=Nelumbo nucifera OX=4432 GN=LOC104589114 ... [more]
BLAST of MELO3C031894 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50030.19.3e-0664.10target of rapamycin [more]
AT1G50030.29.3e-0664.10target of rapamycin [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009076FKBP12-rapamycin binding domainPFAMPF08771FRB_domcoord: 120..143
e-value: 7.8E-7
score: 29.4
IPR036738FKBP12-rapamycin binding domain superfamilySUPERFAMILY47212FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)coord: 125..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031894.1MELO3C031894.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0044877 protein-containing complex binding