MELO3C031116 (gene) Melon (DHL92) v4

Overview
NameMELO3C031116
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionparamyosin-like
Locationchr05: 8238277 .. 8238445 (+)
RNA-Seq ExpressionMELO3C031116
SyntenyMELO3C031116
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTCAACATCAAGAAATCAGAATTAGAAAGTCAAATAGTAGTAGTCAAGAGCTCAACATGGACTGTAGCTAGTATGATTGTAGGGACATGGGCTGAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGGTACGTCGAGGAAAATATAAGGTTGCTTTAA

mRNA sequence

ATGGAGGAGCTCAACATCAAGAAATCAGAATTAGAAAGTCAAATAGTAGTAGTCAAGAGCTCAACATGGACTGTAGCTAGTATGATTGTAGGGACATGGGCTGAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGGTACGTCGAGGAAAATATAAGGTTGCTTTAA

Coding sequence (CDS)

ATGGAGGAGCTCAACATCAAGAAATCAGAATTAGAAAGTCAAATAGTAGTAGTCAAGAGCTCAACATGGACTGTAGCTAGTATGATTGTAGGGACATGGGCTGAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGGTACGTCGAGGAAAATATAAGGTTGCTTTA

Protein sequence

MEELNIKKSELESQIVVVKSSTWTVASMIVGTWAECAKRKVEHYYEVRRGKYKVAL
Homology
BLAST of MELO3C031116 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 4.2e-06
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVA 33

BLAST of MELO3C031116 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 4.2e-06
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVA 33

BLAST of MELO3C031116 vs. NCBI nr
Match: KGN65701.1 (hypothetical protein Csa_019881 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 4.6e-05
Identity = 23/29 (79.31%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 27 SMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          SM++GTWAECA+RK+EHYYEV RGKY+VA
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVA 31

BLAST of MELO3C031116 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 53.1 bits (126), Expect = 8.8e-04
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          TVASMI+ TWA CAKR+VEHYYE RR K++VA
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVA 82

BLAST of MELO3C031116 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVA 33

BLAST of MELO3C031116 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0

Query: 24 TVASMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          TVASMI+GTWAECAKRKVEHYY+ RR KY+VA
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVA 33

BLAST of MELO3C031116 vs. ExPASy TrEMBL
Match: A0A0A0M0F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-05
Identity = 23/29 (79.31%), Postives = 28/29 (96.55%), Query Frame = 0

Query: 27 SMIVGTWAECAKRKVEHYYEVRRGKYKVA 56
          SM++GTWAECA+RK+EHYYEV RGKY+VA
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEVA 31

BLAST of MELO3C031116 vs. ExPASy TrEMBL
Match: A0A5D3CZ75 (Paramyosin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004100 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.2e-04
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 1   MEELNIKKSELESQIVVVKSSTWTVASMIVG-----TWAECAKRKVEHYYEVRRGKY 53
           MEELN+KKSELESQIVVVK +       I       +  EC KRK+E+YY++RR KY
Sbjct: 196 MEELNVKKSELESQIVVVKKAEEDGRRNIKDLESKYSKLECVKRKIEYYYKMRRRKY 252

BLAST of MELO3C031116 vs. ExPASy TrEMBL
Match: A0A5A7TN01 (Paramyosin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001760 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.2e-04
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 1   MEELNIKKSELESQIVVVKSSTWTVASMIVG-----TWAECAKRKVEHYYEVRRGKY 53
           MEELN+KKSELESQIVVVK +       I       +  EC KRK+E+YY++RR KY
Sbjct: 196 MEELNVKKSELESQIVVVKKAEEDGRRNIKDLESKYSKLECVKRKIEYYYKLRRRKY 252

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK22029.14.2e-0684.38uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.14.2e-0684.38uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KGN65701.14.6e-0579.31hypothetical protein Csa_019881 [Cucumis sativus][more]
KAA0045599.18.8e-0475.00hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG82.0e-0684.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR742.0e-0684.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0M0F22.2e-0579.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502890 PE=4 SV=1[more]
A0A5D3CZ757.2e-0454.39Paramyosin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00410... [more]
A0A5A7TN017.2e-0454.39Paramyosin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00176... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031116.1MELO3C031116.1mRNA