MELO3C030445 (gene) Melon (DHL92) v4

Overview
NameMELO3C030445
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 5461051 .. 5461219 (+)
RNA-Seq ExpressionMELO3C030445
SyntenyMELO3C030445
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTTTCAACCGACAAGCGACAACCCCATCACCCATCCCCCTTTGCGGCAATGCATCCCAAGTTCCCAACTTCGCACGATCCCTTCGGCATTCAATCCAGCAATCCCTTCAGCGTTCAATCCCTTCGACGTTCAGATTTCGGCGGCCTTCACAGCTTCAACTTCCGGC

mRNA sequence

CAACTTTCAACCGACAAGCGACAACCCCATCACCCATCCCCCTTTGCGGCAATGCATCCCAAGTTCCCAACTTCGCACGATCCCTTCGGCATTCAATCCAGCAATCCCTTCAGCGTTCAATCCCGGCCTTCACAGCTTCAACTTCCGGC

Coding sequence (CDS)

ATGCATCCCAAGTTCCCAACTTCGCACGATCCCTTCGGCATTCAATCCAGCAATCCCTTCAGCGTTCAATCCCGGCCTTCACAGCTTCAACTTCCG

Protein sequence

MHPKFPTSHDPFGIQSSNPFSVQSRPSQLQLP
Homology
[Close]
BLAST of MELO3C030445 vs. NCBI nr
Match: XP_016902386.1 (PREDICTED: uncharacterized protein LOC107991662 [Cucumis melo])

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 1  MHPKFPTSHDPFGIQSSNPFSVQS 25
          MHPKFPTSHDPFGIQSSNPFSVQS
Sbjct: 1  MHPKFPTSHDPFGIQSSNPFSVQS 24

[Close]
BLAST of MELO3C030445 vs. ExPASy TrEMBL
Match: A0A1S4E2D1 (uncharacterized protein LOC107991662 OS=Cucumis melo OX=3656 GN=LOC107991662 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-05
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 1  MHPKFPTSHDPFGIQSSNPFSVQS 25
          MHPKFPTSHDPFGIQSSNPFSVQS
Sbjct: 1  MHPKFPTSHDPFGIQSSNPFSVQS 24

The following BLAST results are available for this feature:
BLAST of MELO3C030445 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902386.11.3e-04100.00PREDICTED: uncharacterized protein LOC107991662 [Cucumis melo][more]
BLAST of MELO3C030445 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030445 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E2D16.4e-05100.00uncharacterized protein LOC107991662 OS=Cucumis melo OX=3656 GN=LOC107991662 PE=... [more]
BLAST of MELO3C030445 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030445.1MELO3C030445.1mRNA