MELO3C029715 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029715
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr06: 22088886 .. 22090628 (-)
RNA-Seq Expression	MELO3C029715
Synteny	MELO3C029715

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTATGTCCATAGCCATTATGTCATATCGACGATCAAATTTTATAGAGACGGACGATATGTTCCTTCAGTTTGAGGACAATTTAGATAACATCGTGGGAGGGTCGTCATTTGTGGGCGACAATACGGGTGAGTCTAAGAATTTTTTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTCATTATCGATTTATTGAGCAGGGTCTTCTTCTTAACAAGCGACTCTGACTCCTAGGAGACATGCGCAATCTCGACTCTTAAAGTTAGAGCACCACGTTGCAATAAATAGGCGCATTCCGATGACGATCGCGCCTGGAGCGGAAAAGCCTATTTCTCCACACGCCGTTTGCTTCTATAAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGAGCAGACTTTGGAAGAGAATGTATTGAGGTCGTCAAGGGCGATCTCCAGGTAATTAAATGCACTACACATTTATATATGATTTCATTTGAAACATATCTAACTTTAACTAAACTAATGTGTTATGTTTGTAATGTGTAACGATTCTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGGTCACGACCTTTAAAGAGTTTCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCAACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACCTGATGAGAATTGGTGCTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGTATTTGTCATGATTAATTATGATAACAAGTTTTAATATGTATAAGAAATAAACAATATAAATAAACAATATAATTGTTTTAATGCACGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGAAGTGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTTGCTGAGAGAAAAGGAGAGTCGGTCGATCGTGTGCAATTGTTTCGGGAAACACACGTTCGAGTTGGGACATTCGTGTCGCAGGCCGTCGAGGATGCACATGTAAGTTATGCCCTTATTAATTATCCACTTTCATTATATATTTTGCGCGTTACCTAACAGAGTTTTTAAATTTGTTGCAGAATTAAATGCTGGAACTCTAATCCTAACCTACCCTAGAGGGTAGTTAGCCACTCTCTGAGGATGAGATATACGATCAAGTGTTGGGTAGACGACTAGGCTACTTAAAAGGCCTTGGTTGGGGACCGAAGCCGAAGGCCCACAGAACGGCGAGTGCAAGCAGTTCATCGACATCTTGTTCGCAGTCCACAGAAAAAGAGATTGAATTACAAGCTAAACTTCAATAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAAGTATGAAAAAGATGATAGAAGAATTTACTCGTGCACAACAGGGACCACCACATGATCTCTAGCTCTGCGGTACGTATATGTCTATATTATTCTTAAGTTTTTGCAAATATATGATTATGTACTAAATTTAGTTATTTTTATATCATTTTTAGGACCGAAGGTGTAGAATGACGCGCATACGCACCTCGTTATGAGACTTTTTCTTATGTTTATGTTTTTTCTATTTTGAGAACTATATCTATTGTAGTGAACTTATTCGTATTATTAATTTTAATTATATTTTTTTAATTTGTGTTTGTATATTTCTTAATTTAT

mRNA sequence

TTTTCTATGTCCATAGCCATTATGTCATATCGACGATCAAATTTTATAGAGACGGACGATATGTTCCTTCAGTTTGAGGACAATTTAGATAACATCGTGGGAGGGTCGTCATTTGTGGGCGACAATACGGGGTCTTCTTCTTAACAAGCGACTCTGACTCCTAGGAGACATGCGCAATCTCGACTCTTAAAGTTAGAGCACCACGTTGCAATAAATAGGCGCATTCCGATGACGATCGCGCCTGGAGCGGAAAAGCCTATTTCTCCACACGCCGTTTGCTTCTATAAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGAGCAGACTTTGGAAGAGAATGTATTGAGCGATTCTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGGTCACGACCTTTAAAGAGTTTCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCAACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACCTGATGAGAATTGGTGCTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGAAGTGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTTGCTGAGAGAAAAGGAGAGTCGGTCGATCGTGTGCAATTGTTTCGGGAAACACACGTTCGAGTTGGGACATTCGTGTCGCAGGCCGTCGAGGATGCACATAATTAAATGCTGGAACTCTAATCCTAACCTACCCTAGAGGGTAGTTAGCCACTCTCTGAGGATGAGATATACGATCAAGTGTTGGGTAGACGACTAGGCTACTTAAAAGGCCTTGGTTGGGGACCGAAGCCGAAGGCCCACAGAACGGCGAGTGCAAGCAGTTCATCGACATCTTGTTCGCAGTCCACAGAAAAAGAGATTGAATTACAAGCTAAACTTCAATAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAAGACCGAAGGTGTAGAATGACGCGCATACGCACCTCGTTATGAGACTTTTTCTTATGTTTATGTTTTTTCTATTTTGAGAACTATATCTATTGTAGTGAACTTATTCGTATTATTAATTTTAATTATATTTTTTTAATTTGTGTTTGTATATTTCTTAATTTAT

Coding sequence (CDS)

ATGAACAGGTTTGTTGAGCATCAGATGGTCACGACCTTTAAAGAGTTTCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCAACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACCTGATGAGAATTGGTGCTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGAAGTGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTTGCTGAGAGAAAAGGAGAGTCGGTCGATCGTGTGCAATTGTTTCGGGAAACACACGTTCGAGTTGGGACATTCGTGTCGCAGGCCGTCGAGGATGCACATAATTAA

Protein sequence

MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAFQQSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQAVEDAHN

Homology

[Close]

BLAST of MELO3C029715 vs. NCBI nr
Match: TYK21492.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 3.6e-58
Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 276 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 335

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKGE VDRV+LFRETHVR GTFVSQA
Sbjct: 336 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQA 395

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 396 AEDAHN 401

[Close]

BLAST of MELO3C029715 vs. NCBI nr
Match: TYK11230.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 3.6e-58
Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 128 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 187

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKGE VDRV+LFRETHVR GTFVSQA
Sbjct: 188 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQA 247

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 248 AEDAHN 253

[Close]

BLAST of MELO3C029715 vs. NCBI nr
Match: KAA0066607.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.8 bits (595), Expect = 8.1e-58
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 121 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 180

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKG+ VDRV+LFRETHVR GTFVSQA
Sbjct: 181 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGQPVDRVELFRETHVRAGTFVSQA 240

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 241 AEDAHN 246

[Close]

BLAST of MELO3C029715 vs. NCBI nr
Match: TYK18843.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 240 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 299

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQ YNH SGSKSFLQRQYELAERKGESVDRV+LFRETHVR GTFVSQA
Sbjct: 300 QEQSRTNKAARQKQLYNHSSGSKSFLQRQYELAERKGESVDRVELFRETHVRAGTFVSQA 359

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 360 AEDAHN 365

[Close]

BLAST of MELO3C029715 vs. NCBI nr
Match: KAA0046232.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLC+HYISRAF
Sbjct: 121 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCNHYISRAF 180

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKGE VDRV+LFRETHVR GTFVSQA
Sbjct: 181 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQA 240

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 241 AEDAHN 246

[Close]

BLAST of MELO3C029715 vs. ExPASy TrEMBL
Match: A0A5D3CIP7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00760 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 128 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 187

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKGE VDRV+LFRETHVR GTFVSQA
Sbjct: 188 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQA 247

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 248 AEDAHN 253

[Close]

BLAST of MELO3C029715 vs. ExPASy TrEMBL
Match: A0A5D3DD39 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00290 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 276 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 335

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKGE VDRV+LFRETHVR GTFVSQA
Sbjct: 336 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQA 395

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 396 AEDAHN 401

[Close]

BLAST of MELO3C029715 vs. ExPASy TrEMBL
Match: A0A5A7VHM7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00150 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.9e-58
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 121 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 180

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKG+ VDRV+LFRETHVR GTFVSQA
Sbjct: 181 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGQPVDRVELFRETHVRAGTFVSQA 240

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 241 AEDAHN 246

[Close]

BLAST of MELO3C029715 vs. ExPASy TrEMBL
Match: A0A5A7TS43 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00270 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.7e-58
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLC+HYISRAF
Sbjct: 121 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCNHYISRAF 180

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQPYNH SGSKSFLQRQYELAERKGE VDRV+LFRETHVR GTFVSQA
Sbjct: 181 QEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQA 240

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 241 AEDAHN 246

[Close]

BLAST of MELO3C029715 vs. ExPASy TrEMBL
Match: A0A5D3D5L1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00360 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.7e-58
Identity = 115/126 (91.27%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MNRFVEHQMVTTFKEFRADCHRHFKKYSNPEEARANPPNALVGPDENWCFLCDHYISRAF 60
           MNRFVEHQM+TTFKEFRADCHRHFKKYS+PEEARANPPNALVG DE+W FLCDHYISRAF
Sbjct: 240 MNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 299

Query: 61  Q-QSRTNKAARQKQPYNHRSGSKSFLQRQYELAERKGESVDRVQLFRETHVRVGTFVSQA 120
           Q QSRTNKAARQKQ YNH SGSKSFLQRQYELAERKGESVDRV+LFRETHVR GTFVSQA
Sbjct: 300 QEQSRTNKAARQKQLYNHSSGSKSFLQRQYELAERKGESVDRVELFRETHVRAGTFVSQA 359

Query: 121 VEDAHN 126
            EDAHN
Sbjct: 360 AEDAHN 365

The following BLAST results are available for this feature:

BLAST of MELO3C029715 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21492.1	3.6e-58	91.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK11230.1	3.6e-58	91.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0066607.1	8.1e-58	90.48	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK18843.1	1.4e-57	91.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0046232.1	1.4e-57	90.48	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C029715 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIP7	1.8e-58	91.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DD39	1.8e-58	91.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7VHM7	3.9e-58	90.48	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TS43	6.7e-58	90.48	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3D5L1	6.7e-58	91.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C029715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 61..123 e-value: 1.3E-14 score: 54.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..83
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 4..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029715.1	MELO3C029715.1	mRNA