MELO3C029710 (gene) Melon (DHL92) v4

Overview
NameMELO3C029710
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr02: 21327396 .. 21327930 (+)
RNA-Seq ExpressionMELO3C029710
SyntenyMELO3C029710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACAGAGTAAAATTCAGCAGGCTACTTTGGACAGATTCATATCATACATCTCTGGAAAGAGCAAATTAAAAGAAAACCTAAATTCTCCAATTGAGAAATTAGAATCAGCTAATGCAAAGCCATACGCCGAAACCAATGAGAGCGGTACCAAACAGAGCGTACCCGACACGAGTGTCCTCGCCAAGGAGCACTCCGAAAACAGCAGTGGCAGCAAAAGTAGTGGCGTTGGTGACCGGAACGGCGAGAGATATTGGGGCATCACTCAGAATGGCGAAGAAGGTAGCAGAGGCAGTTAGATTAAGCAAAAAAGGGAGAGTGTACTGCCAAATAGAGAAGAGCTTGAGCCATCGACGGAGAGAGGAAAAGGGTTTGGTTGAATCAGAGGAAGATTGGAGAGCTTGGTCCCAGAGAAGAGCGCCACGGCGCATCAGAGCATTGGTGGCGCCCCAGACGAGACCGATCGCAACCATTTTTTCTACATCTCCGATCATCTTTTTCCCTCTCTGTCTCTGTTCAGTCATTAGTTGTGAATAA

mRNA sequence

TCACAGAGTAAAATTCAGCAGGCTACTTTGGACAGATTCATATCATACATCTCTGGAAAGAGCAAATTAAAAGAAAACCTAAATTCTCCAATTGAGAAATTAGAATCAGCTAATGCAAAGCCATACGCCGAAACCAATGAGAGCGGTACCAAACAGAGCGTACCCGACACGAGTGTCCTCGCCAAGGAGCACTCCGAAAACAGCAGTGGCAGCAAAAGTAGTGGCGTTGGTGACCGGAACGGCGAGAGATATTGGGGCATCACTCAGAATGGCGAAGAAGGTAGCAGAGGCAGTTAGATTAAGCAAAAAAGGGAGAGTGTACTGCCAAATAGAGAAGAGCTTGAGCCATCGACGGAGAGAGGAAAAGGGTTTGGTTGAATCAGAGGAAGATTGGAGAGCTTGGTCCCAGAGAAGAGCGCCACGGCGCATCAGAGCATTGGTGGCGCCCCAGACGAGACCGATCGCAACCATTTTTTCTACATCTCCGATCATCTTTTTCCCTCTCTGTCTCTGTTCAGTCATTAGTTGTGAATAA

Coding sequence (CDS)

ATGCAAAGCCATACGCCGAAACCAATGAGAGCGGTACCAAACAGAGCGTACCCGACACGAGTGTCCTCGCCAAGGAGCACTCCGAAAACAGCAGTGGCAGCAAAAGTAGTGGCGTTGGTGACCGGAACGGCGAGAGATATTGGGGCATCACTCAGAATGGCGAAGAAGGTAGCAGAGGCAGTTAGATTAAGCAAAAAAGGGAGAGTGTACTGCCAAATAGAGAAGAGCTTGAGCCATCGACGGAGAGAGGAAAAGGGTTTGGTTGAATCAGAGGAAGATTGGAGAGCTTGGTCCCAGAGAAGAGCGCCACGGCGCATCAGAGCATTGGTGGCGCCCCAGACGAGACCGATCGCAACCATTTTTTCTACATCTCCGATCATCTTTTTCCCTCTCTGTCTCTGTTCAGTCATTAGTTGTGAATAA

Protein sequence

MQSHTPKPMRAVPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSKKGRVYCQIEKSLSHRRREEKGLVESEEDWRAWSQRRAPRRIRALVAPQTRPIATIFSTSPIIFFPLCLCSVISCE
Homology
BLAST of MELO3C029710 vs. NCBI nr
Match: RXI05944.1 (hypothetical protein DVH24_017986 [Malus domestica])

HSP 1 Score: 141.4 bits (355), Expect = 6.1e-30
Identity = 88/132 (66.67%), Postives = 95/132 (71.97%), Query Frame = 0

Query: 6   PKPMRAVPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSK 65
           PK ++AVPN A P  V SP+S P TAVAA VVALVTGTAR+IG  L MAKKVAEA RL+K
Sbjct: 2   PKTIKAVPNIARPRWVCSPKSKPNTAVAANVVALVTGTAREIGVWLSMAKKVAEAERLTK 61

Query: 66  KGRVYCQIEKSLSHRRREEKGL----------VESEEDWRAWSQRRAPRRIRALVAPQTR 125
           KG VYCQI +SLS   RE + L             EED RAWSQRRAPRRIRALVAPQTR
Sbjct: 62  KGTVYCQIARSLSQLVREARSLWWIGPGWARAWAEEEDLRAWSQRRAPRRIRALVAPQTR 121

Query: 126 PIATIFSTSPII 128
           P   IFSTSPII
Sbjct: 122 PTPIIFSTSPII 133

BLAST of MELO3C029710 vs. NCBI nr
Match: KAG6428663.1 (hypothetical protein SASPL_112916 [Salvia splendens])

HSP 1 Score: 135.6 bits (340), Expect = 3.4e-28
Identity = 81/124 (65.32%), Postives = 92/124 (74.19%), Query Frame = 0

Query: 1   MQSHTPKPMRAVPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEA 60
           ++ HTP  MR VPN A PTRVSSPR  PKTAVAAKVVALVTGTA +IG SL +AKKVAEA
Sbjct: 2   IEIHTPNTMRQVPNSASPTRVSSPRMIPKTAVAAKVVALVTGTATEIGESLNIAKKVAEA 61

Query: 61  VRLSKKGRVYCQIEKSLSHRRREEKGLVESEEDWRAWSQRRAPRRIRALVAPQTRPIATI 120
            R +  GRVYCQI++SLSH     +G+     D  AWS + AP R+RALVAPQT P ATI
Sbjct: 62  DRFTTNGRVYCQIKRSLSH--LWSRGVFVWGADLSAWSHKIAPLRMRALVAPQTSPTATI 121

Query: 121 FSTS 125
           FSTS
Sbjct: 122 FSTS 123

BLAST of MELO3C029710 vs. NCBI nr
Match: TKS10737.1 (hypothetical protein D5086_0000080730 [Populus alba])

HSP 1 Score: 128.3 bits (321), Expect = 5.4e-26
Identity = 78/124 (62.90%), Postives = 90/124 (72.58%), Query Frame = 0

Query: 12  VPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSKKGRVYC 71
           VP++A  TRVSSP+S P TAVAA VVALVTGTARD+G SL+MAKK+AEA RLSKKGR YC
Sbjct: 6   VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65

Query: 72  QIEKSLSHRRREEKGL---------VESEEDWRA-WSQRRAPRRIRALVAPQTRPIATIF 126
           Q ++ LS    EE+            E EED+R  WSQR APRRI+ALVAP TRP+  IF
Sbjct: 66  QNKRRLSQLLSEERSFWWNFGGDEREEEEEDFRDWWSQRSAPRRIKALVAPHTRPMVIIF 125

BLAST of MELO3C029710 vs. NCBI nr
Match: KAF9864746.1 (hypothetical protein H0E87_024280 [Populus deltoides])

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-25
Identity = 78/130 (60.00%), Postives = 91/130 (70.00%), Query Frame = 0

Query: 12  VPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSKKGRVYC 71
           VP++A  TRVSSP+S P TAVAA VVALVTGTARD+G SL+MAKK+AEA RLSKKGR YC
Sbjct: 6   VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65

Query: 72  QIEKSLSH---------------RRREEKGLVESEEDWR-AWSQRRAPRRIRALVAPQTR 126
           Q ++ LS                 R +E+   E EED+R  WSQR APRRI+ALVAP TR
Sbjct: 66  QNKRRLSQLLSEERSFWWNFGGDEREDEEEEEEEEEDFRDRWSQRSAPRRIKALVAPHTR 125

BLAST of MELO3C029710 vs. NCBI nr
Match: KAF9827179.1 (hypothetical protein H0E87_016793 [Populus deltoides])

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-25
Identity = 77/126 (61.11%), Postives = 89/126 (70.63%), Query Frame = 0

Query: 12  VPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSKKGRVYC 71
           VP++A  TRVSSP+S P TAVAA VVALVTGTARD+G SL+MAKK+AEA RLSKKGR YC
Sbjct: 6   VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65

Query: 72  QIEKSLSHRRREEKGL-----------VESEEDWRAW-SQRRAPRRIRALVAPQTRPIAT 126
           Q ++ LS    EE+              E EED+  W SQR APRRI+ALVAP TRP+  
Sbjct: 66  QNKRRLSQLLSEERSFWWNFGGDEREDEEEEEDFTDWLSQRSAPRRIKALVAPHTRPMVI 125

BLAST of MELO3C029710 vs. ExPASy TrEMBL
Match: A0A498KHR2 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017986 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-30
Identity = 88/132 (66.67%), Postives = 95/132 (71.97%), Query Frame = 0

Query: 6   PKPMRAVPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSK 65
           PK ++AVPN A P  V SP+S P TAVAA VVALVTGTAR+IG  L MAKKVAEA RL+K
Sbjct: 2   PKTIKAVPNIARPRWVCSPKSKPNTAVAANVVALVTGTAREIGVWLSMAKKVAEAERLTK 61

Query: 66  KGRVYCQIEKSLSHRRREEKGL----------VESEEDWRAWSQRRAPRRIRALVAPQTR 125
           KG VYCQI +SLS   RE + L             EED RAWSQRRAPRRIRALVAPQTR
Sbjct: 62  KGTVYCQIARSLSQLVREARSLWWIGPGWARAWAEEEDLRAWSQRRAPRRIRALVAPQTR 121

Query: 126 PIATIFSTSPII 128
           P   IFSTSPII
Sbjct: 122 PTPIIFSTSPII 133

BLAST of MELO3C029710 vs. ExPASy TrEMBL
Match: A0A4U5QN65 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000080730 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.6e-26
Identity = 78/124 (62.90%), Postives = 90/124 (72.58%), Query Frame = 0

Query: 12  VPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSKKGRVYC 71
           VP++A  TRVSSP+S P TAVAA VVALVTGTARD+G SL+MAKK+AEA RLSKKGR YC
Sbjct: 6   VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65

Query: 72  QIEKSLSHRRREEKGL---------VESEEDWRA-WSQRRAPRRIRALVAPQTRPIATIF 126
           Q ++ LS    EE+            E EED+R  WSQR APRRI+ALVAP TRP+  IF
Sbjct: 66  QNKRRLSQLLSEERSFWWNFGGDEREEEEEDFRDWWSQRSAPRRIKALVAPHTRPMVIIF 125

BLAST of MELO3C029710 vs. ExPASy TrEMBL
Match: A0A6M2EE18 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.4e-26
Identity = 78/126 (61.90%), Postives = 90/126 (71.43%), Query Frame = 0

Query: 12  VPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEAVRLSKKGRVYC 71
           VP++A  TRVSSP+S P TAVAA VVALVTGTARD+G SL+MAKK+AEA RLSKKGR YC
Sbjct: 6   VPSKARSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65

Query: 72  QIEKSLSHRRREEKGL-----------VESEEDWRA-WSQRRAPRRIRALVAPQTRPIAT 126
           Q ++ LS    EE+              E EED+R  WSQR APRRI+ALVAP TRP+  
Sbjct: 66  QNKRRLSQLLSEERSFWWNFGGDESEEEEEEEDFRDWWSQRSAPRRIKALVAPHTRPMVI 125

BLAST of MELO3C029710 vs. ExPASy TrEMBL
Match: A0A0E0KZD0 (Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 75/141 (53.19%), Postives = 91/141 (64.54%), Query Frame = 0

Query: 1   MQSHTPKPMRAVPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEA 60
           MQ+ TP+ M  VP+ A    V SPR    TAVAAKVVALVTGTA +IGA+ R  KK A+A
Sbjct: 1   MQTQTPRMMSVVPSAAGAACVPSPRRAAATAVAAKVVALVTGTAMEIGAAPRRLKKAADA 60

Query: 61  VRLSKKGRVYCQIEKSLSHRRR----EEKGLVESEEDWRAWSQRRAPRRIRALVAPQTRP 120
            RL+  G  YC + +S +HRR     EE+  VE E + R WSQ  APRRIRALVAP TRP
Sbjct: 61  ERLTANGTEYCHVRRSSTHRRNTPVTEEE--VEVERERRRWSQTSAPRRIRALVAPHTRP 120

Query: 121 IATIFSTSPIIFFPLCLCSVI 138
            AT+ + SP    P+ + SVI
Sbjct: 121 TATMLAASP----PMAMASVI 135

BLAST of MELO3C029710 vs. ExPASy TrEMBL
Match: A0A0A9NHR3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 5.2e-19
Identity = 67/126 (53.17%), Postives = 83/126 (65.87%), Query Frame = 0

Query: 1   MQSHTPKPMRAVPNRAYPTRVSSPRSTPKTAVAAKVVALVTGTARDIGASLRMAKKVAEA 60
           MQ+ TP+ + AVP  A   R  SPR+   TAVAAKV ALVTGTA ++GA+ R AKK A+A
Sbjct: 1   MQTQTPRTISAVPRAAGAGRTRSPRTAAATAVAAKVTALVTGTATEMGAAPRSAKKAADA 60

Query: 61  VRLSKKGRVYCQIEKSLSHRRREEKGLVESEEDWRAWSQRRAPRRIRALVAPQTRPIATI 120
            RL+  G  YC + +S +HRRR    L E E   R  SQ  APRR+ ALVAPQTRP AT+
Sbjct: 61  HRLAANGAEYCHVRRSAAHRRRT---LPEGEARARR-SQTSAPRRMSALVAPQTRPTATM 120

Query: 121 FSTSPI 127
            + SP+
Sbjct: 121 LTASPL 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RXI05944.16.1e-3066.67hypothetical protein DVH24_017986 [Malus domestica][more]
KAG6428663.13.4e-2865.32hypothetical protein SASPL_112916 [Salvia splendens][more]
TKS10737.15.4e-2662.90hypothetical protein D5086_0000080730 [Populus alba][more]
KAF9864746.11.6e-2560.00hypothetical protein H0E87_024280 [Populus deltoides][more]
KAF9827179.14.5e-2561.11hypothetical protein H0E87_016793 [Populus deltoides][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A498KHR23.0e-3066.67Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017986 PE=4 SV=1[more]
A0A4U5QN652.6e-2662.90Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000080730 PE=4 SV=1[more]
A0A6M2EE184.4e-2661.90Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1[more]
A0A0E0KZD01.1e-2153.19Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1[more]
A0A0A9NHR35.2e-1953.17Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029710.1MELO3C029710.1mRNA