MELO3C029180.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C029180.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	tRNA-5-taurinomethyluridine 2-sulfurtransferase
Location	chr01: 27428592 .. 27431859 (-)
RNA-Seq Expression	MELO3C029180.jh1
Synteny	MELO3C029180.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGGAGCACATGGACAATGCCCTCACAGAAACTTCTATTTTCTCCTTGGTAGGTATTTCGGTCTCCCTACCCAACTCCACTCTTTTTTTTTTCATTTTAATTTCATTTCTCATCGTTATTCTCAATCTCAACCAGTCAACATTTGATATCGAGACCAAACTTTTCATTTAACCATTGTTTGTTTTGTTTAATTTATTTTTTAATGCCCACAACATGTTTGATGAAATGACTGAATGATGACATTGGTTTTTCTTTGGGTCATTGGTCATTGATAACAGTCCACTAATCAGATTATTTGAAATTTTAGCTTGTTTGGTTTTGGTTATTTAATATTTTCTATCAAATGGCACTACTAAAAAAGATGTTGAGACTGAGTTTAATTGAACACATGCCCTCCATGTTTTATTTGAGTCAATGTGTCGGAAATGGCAAGGCTAGGAAATGGCAAGGCCTCTTTTGGGGTTGTTGAAGTCGTTGACCTTATAAATTCTTTGAAATTTTTTAGTTTACTCTTGGCTGTTGGCTGTCCGGTATCACCAGGTGTTAGTCTTTATTGATCCTGTTAAAGTGTATATGTTTGATTCAGTCTTAGTTAATTTATAGATTGCAAATGAGCATTAGAATCCACAGGTATGAGTGTGTGTATAGCTTATGCAATTACAAAGACTCTGTTGTTGGAAATGAAACTAAAACACTGCTCACTATTCATATTCATCTCAAACTCTTTTATAAACTATGATAAAGACAAACAAAAAGTCCAACAATGCATCTCATTACATTGTCAAAACAAATTTAGATGATATTAAGCATTGATTGATGAAGCCCAACAATTAAATCAGATAACTATTTCCAAGGAGGACCAAAATGAAGCAAATTGGAAAAGTGAAAAAGAAAAAAGGATAAAAGCAACGGTGGCTGTTTCATAGTGGATCACCTGGGCACTCACAAACTTGTTTGTGAAGTGCATCTTCAAGACATGGCTTTAAATACTAGGTTATGGACTTATGGACTGTAATTTTAGATGGATGTGCTATAGATTGTAATGTCAAGATATGTTAAACTTGAATATTATGTGATGACTTTTGATAAGATATGTTCGATTTTTTAATCGGGTTTTTAGCATATTGAAATATGCAACTGTGCAAGCAAAGTTTTTGACTCATGTTGATTATACAACACTGCTGTTGTATATTTCCATGATGTTTTATTACCACAAAATTTGTATACATAAAAATTGTTTGTAATACATATCCAATCCCTTTGACTCAACTACATACGTAGTGGATAAAGGTCTTCAAGCACAAAATATGCATCTTAGGTTTTTTTCTATTGGTTGAATTGAACTTGACCGTCATTTGAATTACTCGGTAGAACCTGTAGGACTACATTAAAATGGGGTTCTACACTTTTTCTTCGACCATTTTAAATTTCATTAGAACTAAGATATCATCCTGGGACATGCGTTTTAAGTTCAAGGTTTTTGTTATTGATTGAACTTGACAGCCTTTTACTAGCTTTTGAATTGCTCAGTTGAACTTGTATGGTTTCAGAATTTACAACAGGATATTACAATTCAAAAATTATGGTAGCTGGTATAGTGAATGCTGGCGTAATTGTAAGTAATCAAATGGCCATTTGAGCTCGAAGATAATAGCCTTTTCATGTGAATGCACTTAAATGGGTTCTGTTTTGGTCAGAATGTCCACGGGACGATGATTTGAAGTATGCTAAAGTTGTTTGTGATCAGGTTTGTTACTATTTTAGCTTAAAAATTCATCTAGACTTACAAAGGTTAATTTTTCCAATGAATATTCAAATGAAATAAAGGATTTGTTGGGAAAATTAAACATAATTCAAGATACCCACAAGTAATATCTTTCTTCTGTAGTTAGTAGTGTTTTTCTTTTGTTGGGAAAATTAAACACTATTTTGCTATTTTCATGACTTTTGTCTATATTCTACACTACTCATGGCAGTTAGTGAGGCCTTTAGTAATTTAACTTGAAGTTTCATGTATAAGCTCAGTGGAAATAGATATGACTCAATATTGCATTATACGGCCAATATTTGTTGCGATCCTTTAGGAAACATCATTAATAAGCTTTATGATTTATGTATCACTTACCTATTCAAGGTTTATCATCAAACACATTTATCCCTTCCTTGTTCCTTCATGCTCCAAAATAAATATTTCTTATTTTACTTGAATATTATTGTTCTTAGGTCAAGGATCAAACATATTTTCTATCACATCTCTCACAGAATCAACTTAAAAGGCTTTTATTCCCTCTTGGTTGTATTCCAAAGGTTCGTTCAAGCTAAATTTATAGTCTTTATTATCATGTATTTTTTTGAGGTATCTCTTATGTTTCAGACTTCAGGGTGTATTCCGAGAAGTTCAAGTTCAACTGTTGTAAAATTGTAAGATTTGGTATTGGCCTTCTAAGCTTGTACAGACATAAACACCTAGTGGCTAACATTGATTTCATTCAGTTTAGAAATTTATGTATTTAATAAAAGTTAAAAATTGTATTATAGACTTTGGAAAACTAGTTGATGTAGATAACATTTTAGAGATTTGTGGATGTTATATTGCAGTTTGAACCTATTAAGTTTTTACTATTCTCGTGTGCAAAACTTATATAAGTGCCTCAATTTATTAGTTCATATCATGCTGACTCCTATCTCAAGTAGCCACATTCTTTCAACTTATGCTCTATCTTTTCGGAAGGAAAAAGGAATACTTGTGTGATTGTTATCTTGTTAATATGTTTTTCTAGGATTGTGACTTTAGCAATATTTTTCTTCTCTCAACTTTATATTCCTTCAACAATCATCTGCAGGATGAATTTTGCAAGCTTGCTGTAAAATTCAACCTACCAAACAAAGACAGAAAGGAACCATAAGGAATATGTTTCCTCGAAAAGGTACTTTGGGATGTGGTGATTCATACATATTTTTTGTTTGTTTGTCTTTTTCTTTACAGGAGGCTAATGGCTTTCTCAAAATTCATTGATCAATGCTTATCTATTTCTAATATGTTGGCGTTGCTGTTTATATTTTAGAATATTCTTTACTACTTTTTAGAACTATTTATAGTAATACAGGATTTAGTACAAGACTTGCCAACTCGTGTTGAAATTTTCTGATGGCTATACGTTCCCTGAGCAAGTGTTTTATTTCCTTATTCTTCCTGACAGCCAACACCAGGGTCTAAGACTTCCTGGAGGACCTTGGTATGCCTTCTCAGTTTCGTTTCTTTAA

mRNA sequence

ATGCTGGGAGCACATGGACAATGCCCTCACAGAAACTTCTATTTTCTCCTTGGTAGTTTACTCTTGGCTGTTGGCTGTCCGGTATCACCAGGATATTACAATTCAAAAATTATGGTAGCTGGTATAGTGAATGCTGGCGTAATTGTAAAATGTCCACGGGACGATGATTTGAAGTATGCTAAAGTTGTTTGTGATCAGGTTTGTTACTATTTTAGCTTAAAAATTCATCTAGACTTACAAAGGTTAATTTTTCCAATGAATATTCAAATGAAATAAAGGATTTGTTGGGAAAATTAAACATAATTCAAGATACCCACAATTTCATGTATAAGCTCAGTGGAAATAGATATGACTCAATATTGCATTATACGGCCAATATTTGTTGCGATCCTTTAGGAAACATCATTAATAAGCTTTATGATTTATGTATCACTTACCTATTCAAGGTCAAGGATCAAACATATTTTCTATCACATCTCTCACAGAATCAACTTAAAAGGCTTTTATTCCCTCTTGGTTGTATTCCAAAGACTTCAGGGTGTATTCCGAGAAGTTCAAGTTCAACTGTTGATTGTGACTTTAGCAATATTTTTCTTCTCTCAACTTTATATTCCTTCAACAATCATCTGCAGGATGAATTTTGCAAGCTTGCTGTAAAATTCAACCTACCAAACAAAGACAGAAAGGAACCATAAGGAATATGTTTCCTCGAAAAGTACAAGACTTGCCAACTCGTGTTGAAATTTTCTGATGGCTATACGTTCCCTGAGCAAGTGTTTTATTTCCTTATTCTTCCTGACAGCCAACACCAGGGTCTAAGACTTCCTGGAGGACCTTGGTATGCCTTCTCAGTTTCGTTTCTTTAA

Coding sequence (CDS)

ATGTATAAGCTCAGTGGAAATAGATATGACTCAATATTGCATTATACGGCCAATATTTGTTGCGATCCTTTAGGAAACATCATTAATAAGCTTTATGATTTATGTATCACTTACCTATTCAAGGTCAAGGATCAAACATATTTTCTATCACATCTCTCACAGAATCAACTTAAAAGGCTTTTATTCCCTCTTGGTTGTATTCCAAAGACTTCAGGGTGTATTCCGAGAAGTTCAAGTTCAACTGTTGATTGTGACTTTAGCAATATTTTTCTTCTCTCAACTTTATATTCCTTCAACAATCATCTGCAGGATGAATTTTGCAAGCTTGCTGTAAAATTCAACCTACCAAACAAAGACAGAAAGGAACCATAA

Protein sequence

MYKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLLFPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRKEP

Homology

[Close]

BLAST of MELO3C029180.jh1 vs. NCBI nr
Match: KAF1885023.1 (hypothetical protein Lal_00028912 [Lupinus albus])

HSP 1 Score: 78.6 bits (192), Expect = 4.80e-14
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y  ++H +++   +P  +I+    D+       VKDQTYFLSHLSQ+QLKRLL
Sbjct: 207 YVASGH-YARVIHPSSDQMDEP--SILELSQDM-------VKDQTYFLSHLSQSQLKRLL 266

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK             DC   +I+     + F +   DE  KLA KF+LPNKDRK
Sbjct: 267 FPLGCIPKVCS----------DC-LVHIYNAEVAFYFVSD-SDEVRKLASKFDLPNKDRK 305

[Close]

BLAST of MELO3C029180.jh1 vs. NCBI nr
Match: KAG7010265.1 (mnmA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.8 bits (190), Expect = 9.12e-14
Identity = 47/96 (48.96%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 27  IINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLLFPLGCIPKTSGCIPRSSSSTVDCDF 86
           ++   Y LC+T    VKDQTYFLSHLSQNQLKRLLFPLGCIPK                 
Sbjct: 264 VLTFAYILCMT----VKDQTYFLSHLSQNQLKRLLFPLGCIPK----------------- 321

Query: 87  SNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRKE 122
                            DE  KLA KFNLPNKDRK+
Sbjct: 324 -----------------DEVRKLAAKFNLPNKDRKD 321

[Close]

BLAST of MELO3C029180.jh1 vs. NCBI nr
Match: XP_031739889.1 (uncharacterized protein LOC101204779 isoform X2 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 2.55e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 201 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 260

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 261 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 277

[Close]

BLAST of MELO3C029180.jh1 vs. NCBI nr
Match: XP_022985745.1 (uncharacterized protein LOC111483706 [Cucurbita maxima])

HSP 1 Score: 76.3 bits (186), Expect = 3.12e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 199 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 258

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 259 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 275

[Close]

BLAST of MELO3C029180.jh1 vs. NCBI nr
Match: XP_023513286.1 (uncharacterized protein LOC111777800 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.3 bits (186), Expect = 3.12e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 199 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 258

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 259 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 275

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy Swiss-Prot
Match: O51625 (tRNA-specific 2-thiouridylase MnmA OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) OX=224326 GN=mnmA PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-05
Identity = 35/112 (31.25%), Postives = 46/112 (41.07%), Query Frame = 0


Query: 28  INKLYDLCITYLF-----------------KVKDQTYFLSHLSQNQLKRLLFPLGCIPKT 87
           IN  YDL +T  +                 K+KDQ+YFLSHLSQ Q+ +L FPLG +   
Sbjct: 113 INSQYDLVVTGHYAKIQIKESKFLLKQAKDKIKDQSYFLSHLSQKQMSKLYFPLGTL--- 172

Query: 88  SGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRKE 123
                                          L+ E  ++A   NLPNKDRK+
Sbjct: 173 -------------------------------LKSEVRQIAKNINLPNKDRKD 190

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy Swiss-Prot
Match: B7J2N7 (tRNA-specific 2-thiouridylase MnmA OS=Borrelia burgdorferi (strain ZS7) OX=445985 GN=mnmA PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-05
Identity = 35/112 (31.25%), Postives = 46/112 (41.07%), Query Frame = 0


Query: 28  INKLYDLCITYLF-----------------KVKDQTYFLSHLSQNQLKRLLFPLGCIPKT 87
           IN  YDL +T  +                 K+KDQ+YFLSHLSQ Q+ +L FPLG +   
Sbjct: 113 INSQYDLVVTGHYAKIQIKESKFLLKQAKDKIKDQSYFLSHLSQKQISKLYFPLGTL--- 172

Query: 88  SGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRKE 123
                                          L+ E  ++A   NLPNKDRK+
Sbjct: 173 -------------------------------LKSEVRQIAKNINLPNKDRKD 190

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy Swiss-Prot
Match: Q660I8 (tRNA-specific 2-thiouridylase MnmA OS=Borrelia bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi) OX=290434 GN=mnmA PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.2e-05
Identity = 35/112 (31.25%), Postives = 47/112 (41.96%), Query Frame = 0


Query: 28  INKLYDLCITYLF-----------------KVKDQTYFLSHLSQNQLKRLLFPLGCIPKT 87
           IN+ YDL +T  +                 K+KDQ+YFLSHLSQ Q+ +L FPLG + K+
Sbjct: 113 INEQYDLVVTGHYARIQIKEKKFFLKQAKDKIKDQSYFLSHLSQEQMSKLYFPLGTLFKS 172

Query: 88  SGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRKE 123
                                             E  ++A   NLPNKDRK+
Sbjct: 173 ----------------------------------EVRQIAKSINLPNKDRKD 190

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy Swiss-Prot
Match: Q0SMH1 (tRNA-specific 2-thiouridylase MnmA OS=Borrelia afzelii (strain PKo) OX=390236 GN=mnmA PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 34/112 (30.36%), Postives = 47/112 (41.96%), Query Frame = 0


Query: 28  INKLYDLCITYLF-----------------KVKDQTYFLSHLSQNQLKRLLFPLGCIPKT 87
           IN+ YDL +T  +                 K+KDQ+YFLSHLSQ Q+ +L FPLG +   
Sbjct: 113 INEQYDLVVTGHYAKIQTKDKKFFLKQAKDKIKDQSYFLSHLSQKQMSKLYFPLGTL--- 172

Query: 88  SGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRKE 123
                                          L+ E  ++A   NLPNK+RK+
Sbjct: 173 -------------------------------LKSEVRQIAKNINLPNKNRKD 190

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy Swiss-Prot
Match: B1AJ41 (tRNA-specific 2-thiouridylase MnmA OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) OX=505682 GN=mnmA PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-04
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 8   RYDSILHYTAN-ICCD--PLGNIINKLYDLCITYLFKV----KDQTYFLSHLSQNQLKRL 67
           ++DS L+Y  N +  D   +G+     +D   ++L K     KDQTYFL +L+QNQL+ +
Sbjct: 118 KFDSFLNYAKNELQADYIAMGHYARVKHDRNSSFLLKAIDTNKDQTYFLCNLNQNQLQNV 177

Query: 68  LFPLGCIPK 70
           LFP+G + K
Sbjct: 178 LFPIGHLTK 186

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy TrEMBL
Match: A0A6A5NPA6 (tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Lupinus albus OX=3870 GN=Lal_00028912 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.32e-14
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y  ++H +++   +P  +I+    D+       VKDQTYFLSHLSQ+QLKRLL
Sbjct: 207 YVASGH-YARVIHPSSDQMDEP--SILELSQDM-------VKDQTYFLSHLSQSQLKRLL 266

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK             DC   +I+     + F +   DE  KLA KF+LPNKDRK
Sbjct: 267 FPLGCIPKVCS----------DC-LVHIYNAEVAFYFVSD-SDEVRKLASKFDLPNKDRK 305

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JC61 (tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucurbita maxima OX=3661 GN=LOC111483706 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.51e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 199 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 258

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 259 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 275

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KX16 (tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucumis sativus OX=3659 GN=Csa_4G291390 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.51e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 201 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 260

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 261 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 277

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TDN6 (tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00570 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.51e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 202 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 261

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 262 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 278

[Close]

BLAST of MELO3C029180.jh1 vs. ExPASy TrEMBL
Match: A0A5D3B8G8 (tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001100 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.51e-13
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 2   YKLSGNRYDSILHYTANICCDPLGNIINKLYDLCITYLFKVKDQTYFLSHLSQNQLKRLL 61
           Y  SG+ Y +++H +A+    P  +++    D+       VKDQTYFLSHLSQNQLKRLL
Sbjct: 202 YVASGH-YANVIHPSADQMDKP--SVLELSKDM-------VKDQTYFLSHLSQNQLKRLL 261

Query: 62  FPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNHLQDEFCKLAVKFNLPNKDRK 121
           FPLGCIPK                                  DE  KLA KFNLPNKDRK
Sbjct: 262 FPLGCIPK----------------------------------DEVRKLAAKFNLPNKDRK 278

[Close]

BLAST of MELO3C029180.jh1 vs. TAIR 10
Match: AT1G51310.1 (transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases )

HSP 1 Score: 65.1 bits (157), Expect = 4.6e-11
Identity = 38/81 (46.91%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 42  VKDQTYFLSHLSQNQLKRLLFPLGCIPKTSGCIPRSSSSTVDCDFSNIFLLSTLYSFNNH 101
           VKDQTYFLSHLSQ QLKRLLFPLGC+ K                                
Sbjct: 231 VKDQTYFLSHLSQTQLKRLLFPLGCVKK-------------------------------- 277

Query: 102 LQDEFCKLAVKFNLPNKDRKE 123
             DE  KLA +F+LPNKDRK+
Sbjct: 291 --DEVRKLATQFDLPNKDRKD 277

The following BLAST results are available for this feature:

BLAST of MELO3C029180.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1885023.1	4.80e-14	43.80	hypothetical protein Lal_00028912 [Lupinus albus]	[more]
KAG7010265.1	9.12e-14	48.96	mnmA [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_031739889.1	2.55e-13	42.15	uncharacterized protein LOC101204779 isoform X2 [Cucumis sativus]	[more]
XP_022985745.1	3.12e-13	42.15	uncharacterized protein LOC111483706 [Cucurbita maxima]	[more]
XP_023513286.1	3.12e-13	42.15	uncharacterized protein LOC111777800 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C029180.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O51625	3.6e-05	31.25	tRNA-specific 2-thiouridylase MnmA OS=Borrelia burgdorferi (strain ATCC 35210 / ...	[more]
B7J2N7	3.6e-05	31.25	tRNA-specific 2-thiouridylase MnmA OS=Borrelia burgdorferi (strain ZS7) OX=44598...	[more]
Q660I8	6.2e-05	31.25	tRNA-specific 2-thiouridylase MnmA OS=Borrelia bavariensis (strain ATCC BAA-2496...	[more]
Q0SMH1	1.1e-04	30.36	tRNA-specific 2-thiouridylase MnmA OS=Borrelia afzelii (strain PKo) OX=390236 GN...	[more]
B1AJ41	3.1e-04	39.13	tRNA-specific 2-thiouridylase MnmA OS=Ureaplasma parvum serovar 3 (strain ATCC 2...	[more]

BLAST of MELO3C029180.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5NPA6	2.32e-14	43.80	tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Lupinus albus OX=3870 GN=Lal_...	[more]
A0A6J1JC61	1.51e-13	42.15	tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KX16	1.51e-13	42.15	tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A5A7TDN6	1.51e-13	42.15	tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3B8G8	1.51e-13	42.15	tRNA-5-taurinomethyluridine 2-sulfurtransferase OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of MELO3C029180.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51310.1	4.6e-11	46.91	transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF03054	tRNA_Me_trans	coord: 41..70 e-value: 2.9E-8 score: 32.9
None	No IPR available	PANTHER	PTHR43052	FAMILY NOT NAMED	coord: 41..69
None	No IPR available	PANTHER	PTHR43052:SF3	BNAA08G29550D PROTEIN	coord: 41..69
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 35..123 e-value: 9.7E-9 score: 37.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029180.jh1.t1	MELO3C029180.jh1.t1	mRNA