MELO3C028997 (gene) Melon (DHL92) v4

Overview
NameMELO3C028997
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNEP1-interacting protein-like 2 isoform X2
Locationchr01: 12818516 .. 12819952 (+)
RNA-Seq ExpressionMELO3C028997
SyntenyMELO3C028997
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGCATATGCATTGTATATAATATCCACAAACTTGGCCCTACCACCTTCTTCTTTCTTCGATAATACCCTTTAAATATCCAACTCAATAAACTTCAATGCAATTCTTCAAACTCTTTGACATCGATCTCTGCGTGATTTCTTGTTAATTCTGAGTTTACCATGTTGGTTGTTGAGTTTAAGGAGCAGCTTTTTTTTGATAAAGCTCTTCGGTTCCTCGCCGAAGCTTTGAAGACTATCGCCTTGGCTTTGCTCCTATCTCTTCTCGCTCTGGGTATGCTGTCTCTCATCTCAATAAGTTATTTGATACACTATATATAACATCATGGATTGGGGTTTAATTAATCAATATGGTTGCAAAAATAGTTAAAGAATCAGTATAATTGTTTTTGTTTTTCGGCCTTGAATGAATTTGTACACAGTTGGTGCGTGTGTGGGGACTGTGATCGGAGCTTTCAAAGGCCATGGCGCGGCGATAGGCGCTATTGCCGGTGCGGCCGTAGCCCTTCAGATAGTGAGCTGCACTGCATCTGGGCAAAGATATTATTGTTTATCAAGGGTAGGCTTTTCATTATATCAAAGGTTAGAAGGAAATGTCATTTGAAAGAATGATACAGATTTAAAAAACTTCAAGTTATAGGTTTATTTCTTTAATTGTGTGTTTAACACATAACTAAAACTCTAAAAATGTCTAACAACCTTTCTACAAAATATTCAATTTTATATTTAAATATATTATATTTTGGATTCAATTTTTTCAAAAAGGAAGTAATATATTTTTAATTATATTGAAATGAAAAAACAAATATTTTAAAGACTAAATTTATTTGCTATTTACAGCTATGTTTGCTAATATATATATATATATATTTTAATATATATATATATATATATATATATATATATATATATATCAAACGATTAACTTTTAATATCAATGTTTAATTTTATTTTTGTTTGCGTCTTTCTAAGACTGCATTTGATAGTGGCAGGAAGCAATAATGGAGAGCCTGATGGATGGGAAGGGGTTGATGAACTGGGTAAGTGAAAAAGCTTGAATGCTACCTTTAATGGCGGATTATTTAAGATTCAATATTTTTCTAAAAGACAATATTTTAGGCAAGCAACTTCTCCGAGTATATGCATCGAGAGATATCAGAGTTTGTCGATGTGGCTGGAGAAAGTTGTGCTGAAGGGTTGTCAATGGAGAGTGTTCAAATGTTGCCTGTTTGTGAATATGATCACAGCACCATCAACTCCATTTCTTGTTCCATTTGCTTAGAGGTAATATTTCTATATATAGATACATATATATATATATATTTAGTTATAAACTCTGCAAAAGTTAATCCAAATTAGTATTAAATTATTCTTATTTTTAATTTTGATTTTGTTTTTCTATAGGTTATATCACAAGTTTCATGTATAACAGTATAA

mRNA sequence

GTAAGCATATGCATTGTATATAATATCCACAAACTTGGCCCTACCACCTTCTTCTTTCTTCGATAATACCCTTTAAATATCCAACTCAATAAACTTCAATGCAATTCTTCAAACTCTTTGACATCGATCTCTGCGTGATTTCTTGTTAATTCTGAGTTTACCATGTTGGTTGTTGAGTTTAAGGAGCAGCTTTTTTTTGATAAAGCTCTTCGGTTCCTCGCCGAAGCTTTGAAGACTATCGCCTTGGCTTTGCTCCTATCTCTTCTCGCTCTGGTTGGTGCGTGTGTGGGGACTGTGATCGGAGCTTTCAAAGGCCATGGCGCGGCGATAGGCGCTATTGCCGGTGCGGCCGTAGCCCTTCAGATAGTGAGCTGCACTGCATCTGGGCAAAGATATTATTGTTTATCAAGGGTAGGCTTTTCATTATATCAAAGACTGCATTTGATAGTGGCAGGAAGCAATAATGGAGAGCCTGATGGATGGGAAGGGGTTGATGAACTGGGCAAGCAACTTCTCCGAGTATATGCATCGAGAGATATCAGAGTTTGTCGATGTGGCTGGAGAAAGTTGTGCTGAAGGGTTGTCAATGGAGAGTGTTCAAATGTTGCCTGTTTGTGAATATGATCACAGCACCATCAACTCCATTTCTTGTTCCATTTGCTTAGAGGTTATATCACAAGTTTCATGTATAACAGTATAA

Coding sequence (CDS)

ATGTTGGTTGTTGAGTTTAAGGAGCAGCTTTTTTTTGATAAAGCTCTTCGGTTCCTCGCCGAAGCTTTGAAGACTATCGCCTTGGCTTTGCTCCTATCTCTTCTCGCTCTGGTTGGTGCGTGTGTGGGGACTGTGATCGGAGCTTTCAAAGGCCATGGCGCGGCGATAGGCGCTATTGCCGGTGCGGCCGTAGCCCTTCAGATAGTGAGCTGCACTGCATCTGGGCAAAGATATTATTGTTTATCAAGGGTAGGCTTTTCATTATATCAAAGACTGCATTTGATAGTGGCAGGAAGCAATAATGGAGAGCCTGATGGATGGGAAGGGGTTGATGAACTGGGCAAGCAACTTCTCCGAGTATATGCATCGAGAGATATCAGAGTTTGTCGATGTGGCTGGAGAAAGTTGTGCTGA

Protein sequence

MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIAGAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDELGKQLLRVYASRDIRVCRCGWRKLC
Homology
[Close]
BLAST of MELO3C028997 vs. NCBI nr
Match: TYK23118.1 (NEP1-interacting protein-like 2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 3.6e-51
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
           MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 61  GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 114
           GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL
Sbjct: 61  GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 113

[Close]
BLAST of MELO3C028997 vs. NCBI nr
Match: XP_008447739.1 (PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
          MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
          GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83

[Close]
BLAST of MELO3C028997 vs. NCBI nr
Match: XP_008447740.1 (PREDICTED: NEP1-interacting protein-like 2 isoform X2 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
          MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
          GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83

[Close]
BLAST of MELO3C028997 vs. NCBI nr
Match: XP_011658973.2 (NEP1-interacting protein-like 1 [Cucumis sativus] >KGN44159.1 hypothetical protein Csa_016143 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 2.5e-20
Identity = 67/83 (80.72%), Postives = 69/83 (83.13%), Query Frame = 0 

Query: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
           MLV+EFKEQLFF K LRFL EALK I  AL LSLLALVGA VGTVIGAFKGHG  IGAIA
Sbjct: 19  MLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFKGHGTGIGAIA 78

Query: 61  GAAVALQIVSCTASGQRYYCLSR 84
           GAAVALQI S +ASG R YCLSR
Sbjct: 79  GAAVALQIFSSSASGHR-YCLSR 100

[Close]
BLAST of MELO3C028997 vs. NCBI nr
Match: XP_038897454.1 (NEP1-interacting protein-like 2 [Benincasa hispida])

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-18
Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 0 

Query: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
          +LV+EFKEQ  FDKA RF  EA KT+  AL LSLLALVGA  GTVIGAFKGHGAAIGAIA
Sbjct: 22 LLVIEFKEQQVFDKAFRFFVEASKTVGFALFLSLLALVGASAGTVIGAFKGHGAAIGAIA 81

Query: 61 GAAVALQIVSCTASGQRY 79
          GAA  LQI++CT SG RY
Sbjct: 82 GAATVLQILNCTESGHRY 99

[Close]
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match: A0A5D3DI33 (NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001100 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
           MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 61  GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 114
           GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL
Sbjct: 61  GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 113

[Close]
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match: A0A1S3BI36 (NEP1-interacting protein-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490143 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
          MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
          GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83

[Close]
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match: A0A1S3BIQ9 (NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490143 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
          MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1  MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60

Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
          GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83

[Close]
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match: A0A0A0K5D1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209550 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 67/83 (80.72%), Postives = 69/83 (83.13%), Query Frame = 0 

Query: 1   MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
           MLV+EFKEQLFF K LRFL EALK I  AL LSLLALVGA VGTVIGAFKGHG  IGAIA
Sbjct: 19  MLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFKGHGTGIGAIA 78

Query: 61  GAAVALQIVSCTASGQRYYCLSR 84
           GAAVALQI S +ASG R YCLSR
Sbjct: 79  GAAVALQIFSSSASGHR-YCLSR 100

[Close]
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match: A0A6J1IML2 (NEP1-interacting protein-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111476931 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-14
Identity = 54/77 (70.13%), Postives = 57/77 (74.03%), Query Frame = 0 

Query: 2  LVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIAG 61
          LV+E K  L FDKAL F  EAL  IA AL L LLALVGA VGTVIGAFKGHGAAIGAI G
Sbjct: 22 LVIELKHHLVFDKALWFFVEALNAIAFALFLCLLALVGASVGTVIGAFKGHGAAIGAIVG 81

Query: 62 AAVALQIVSCTASGQRY 79
          AA ALQ++SC     RY
Sbjct: 82 AAAALQLLSCPEPEYRY 98

The following BLAST results are available for this feature:
BLAST of MELO3C028997 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK23118.13.6e-51100.00NEP1-interacting protein-like 2 isoform X2 [Cucumis melo var. makuwa][more]
XP_008447739.11.1e-31100.00PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Cucumis melo][more]
XP_008447740.11.1e-31100.00PREDICTED: NEP1-interacting protein-like 2 isoform X2 [Cucumis melo][more]
XP_011658973.22.5e-2080.72NEP1-interacting protein-like 1 [Cucumis sativus] >KGN44159.1 hypothetical prote... [more]
XP_038897454.11.8e-1874.36NEP1-interacting protein-like 2 [Benincasa hispida][more]
BLAST of MELO3C028997 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DI331.7e-51100.00NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3BI365.3e-32100.00NEP1-interacting protein-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034901... [more]
A0A1S3BIQ95.3e-32100.00NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034901... [more]
A0A0A0K5D11.2e-2080.72RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209550 P... [more]
A0A6J1IML21.0e-1470.13NEP1-interacting protein-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111476931 PE=4... [more]
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028997.1MELO3C028997.1mRNA