MELO3C027644 (gene) Melon (DHL92) v4

Overview
NameMELO3C027644
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTPRXL protein
Locationchr08: 21861287 .. 21861460 (+)
RNA-Seq ExpressionMELO3C027644
SyntenyMELO3C027644
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGACAGCATATGAAGAAAGAGATGAAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCCAAGGAGTACTGGAACCAACATGAAAAATGGTGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATAATGCCAATCCTACTATGATATTATGTACATAA

mRNA sequence

CAGACAGCATATGAAGAAAGAGATGAAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCCAAGGAGTACTGGAACCAACATGAAAAATGGTGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATAATGCCAATCCTACTATGATATTATGTACATAA

Coding sequence (CDS)

ATGTGTGCCAAGGAGTACTGGAACCAACATGAAAAATGGTGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATAATGCCAATCCTACTATGATATTATGTACATAA

Protein sequence

MCAKEYWNQHEKWWSLSSYYDIVKGEGNNNANPTMILCT
Homology
[Close]
BLAST of MELO3C027644 vs. NCBI nr
Match: KAA0054205.1 (TPRXL protein [Cucumis melo var. makuwa] >TYK15058.1 TPRXL protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-09
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 1  MCAKEYWNQHEKWWSLSSYYDIVKGEGNNNANPTM 36
          MCA+EYWNQHEKWWSLSSYYDIVKGEG NN N TM
Sbjct: 45 MCAEEYWNQHEKWWSLSSYYDIVKGEG-NNINHTM 78

[Close]
BLAST of MELO3C027644 vs. ExPASy TrEMBL
Match: A0A5A7UKK3 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001080 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-09
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0 

Query: 1  MCAKEYWNQHEKWWSLSSYYDIVKGEGNNNANPTM 36
          MCA+EYWNQHEKWWSLSSYYDIVKGEG NN N TM
Sbjct: 45 MCAEEYWNQHEKWWSLSSYYDIVKGEG-NNINHTM 78

The following BLAST results are available for this feature:
BLAST of MELO3C027644 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054205.12.8e-0988.57TPRXL protein [Cucumis melo var. makuwa] >TYK15058.1 TPRXL protein [Cucumis melo... [more]
BLAST of MELO3C027644 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C027644 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UKK31.4e-0988.57TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001080 ... [more]
BLAST of MELO3C027644 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027644.1MELO3C027644.1mRNA