MELO3C027268.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATATAATTACTATTATATTATTATTTTATCGTTTTACAAAAATCTTAAATTTCCGAAAATTCACATGATTTACTAAAATTTACCTCGATCTTCGGGGCGTTACACATATGGTGCCAAACCTAATATTGATATTATTCAGGTAAATATAAGATAAAATTTGTATTATATGTAATTCTAATTTATCTAATGAAATAATTCACTTTACAGGTTTTGGCAAATGCATGGAAGGATGCATGTGCATCAACCAATCCTAGTCAATTGATGATTCCAATAGGAGTTTACCAACTAAACCAATCCATTCTCCATGGTCCTTGCAAGAGTACTATTGAGGTTCGAATGGAAGGAACATTACAAGCTCATCCCGAACCAACAGGAGTTGGGTTGGTTCTTTTTCAATATATCGATCAATTGACAGTGTCAAGCACGGGTGCTTTTGATGTCAAGGAGAAAATGGTTGGGAAAAGAATGATTGTCACTTGAAGAAAATATGCACTAAAATTTCCATGGTAAATTCTCTAATCATATTAGCTTCTTTCTATGTAATATCGTAGAATATATAATTTTTCAATTAATATATGCATTTTTTTAACTTGGATACCTTTTCTTTTTTGCGGGCGGGCCGGGGTTGAATTTGTAAGAATGTGAGGTTCAGTTTCATAACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAGAATTTTCATATCCATCTCTTGGGTTGCAAGAATGTTACTTTTCAAAATGTGACAATTATTGTACCAGAGAAAAGCCCCAACACCGATGGAATTCATATGAGTAGTTCATAAGAGATTAACATTCTCAACAGGAGATGATTGTGTGCTGTTGGAGACAGCAACAAGCAAATAACTATTACTAATGTAATTTGTGGACCAAGACATGGCATTAGTATAGGAAGTTTAGGCAAGTACACTAAGGAAAAAGAGGTGACAGGAGTTACAGTGAGATCATCATGTAAATTAATCAATACTTTGAATGGTGTTAGAATCTTGGCCAGATTCTACAGTTGCATACACAGCCTCTGACTTGTATTTTGAAGATATTAAAATGGTTAATGTTAGCAATCCTGTCATTATTGACCAAGAATATTGTCCATCTAATCATAGCAACAAAAAGGTATATGTGTATTGAAATTAGTCCAGCTTATTCATAATTTTCAACTAATTAACATCAAGTAATATAACAAATGCAAAACTAACCTGATTTAATTATTTGTTTTCTTATGTATACGTTTGTTTAGATTCCATCAAAAATTAAGATATGTAACGTTAGTTTCAAGAATATCAAAGGCACTTCTGCTACTTTTGTCGCTGTTAAATTTATCTGTAGCAAAGATTTACCATGTGAAGGTGTGGAAGTTGATGATATTGACTTAGCTTACACTGGAACTCGAGGACGGATTACGCCTCAGTGTAGAAATGTGATTCCCATCATTACTGGAAAGCAAAATCCTCGTGCGTGTGTCGAAGTTGCTCCTATTAATTCTCCATCCACGGACTGA ATATAATTACTATTATATTATTATTTTATCGTTTTACAAAAATCTTAAATTTCCGAAAATTCACATGATTTACTAAAATTTACCTCGATCTTCGGGGCGTTACACATATGGTGCCAAACCTAATATTGATATTATTCAGGTTTTGGCAAATGCATGGAAGGATGCATGTGCATCAACCAATCCTAGTCAATTGATGATTCCAATAGGAGTTTACCAACTAAACCAATCCATTCTCCATGGTCCTTGCAAGAGTACTATTGAGGTTCGAATGGAAGGAACATTACAAGCTCATCCCGAACCAACAGGAGTTGGGTTGGTTCTTTTTCAATATATCGATCAATTGACAGTGTCAAGCACGGGTGCTTTTGATGTCAAGGAGAAAATGGTTGGGAAAAGAATGATTGTCACTTGAAGAAAATATGCACTAAAATTTCCATGAATGTGAGGTTCAGTTTCATAACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAGAATTTTCATATCCATCTCTTGGGTTGCAAGAATGTTACTTTTCAAAATGTGACAATTATTGTACCAGAGAAAAGCCCCAACACCGATGGAATTCATATGAGTAGTTCATAAGAGATTAACATTCTCAACAGGAGATGATTGTGTGCTGTTGGAGACAGCAACAAGCAAATAACTATTACTAATGTAATTTGTGGACCAAGACATGGCATTAGTATAGGAAGTTTAGGCAAGTACACTAAGGAAAAAGAGGTGACAGGAGTTACAGTGAGATCATCATGTAAATTAATCAATACTTTGAATGGTGTTAGAATCTTGGCCAGATTCTACAGTTGCATACACAGCCTCTGACTTGTATTTTGAAGATATTAAAATGGTTAATGTTAGCAATCCTGTCATTATTGACCAAGAATATTGTCCATCTAATCATAGCAACAAAAAGATTCCATCAAAAATTAAGATATGTAACGTTAGTTTCAAGAATATCAAAGGCACTTCTGCTACTTTTGTCGCTGTTAAATTTATCTGTAGCAAAGATTTACCATGTGAAGGTGTGGAAGTTGATGATATTGACTTAGCTTACACTGGAACTCGAGGACGGATTACGCCTCAGTGTAGAAATGTGATTCCCATCATTACTGGAAAGCAAAATCCTCGTGCGTGTGTCGAAGTTGCTCCTATTAATTCTCCATCCACGGACTGA ATGGTGTTAGAATCTTGGCCAGATTCTACAGTTGCATACACAGCCTCTGACTTGTATTTTGAAGATATTAAAATGGTTAATGTTAGCAATCCTGTCATTATTGACCAAGAATATTGTCCATCTAATCATAGCAACAAAAAGATTCCATCAAAAATTAAGATATGTAACGTTAGTTTCAAGAATATCAAAGGCACTTCTGCTACTTTTGTCGCTGTTAAATTTATCTGTAGCAAAGATTTACCATGTGAAGGTGTGGAAGTTGATGATATTGACTTAGCTTACACTGGAACTCGAGGACGGATTACGCCTCAGTGTAGAAATGTGATTCCCATCATTACTGGAAAGCAAAATCCTCGTGCGTGTGTCGAAGTTGCTCCTATTAATTCTCCATCCACGGACTGA MVLESWPDSTVAYTASDLYFEDIKMVNVSNPVIIDQEYCPSNHSNKKIPSKIKICNVSFKNIKGTSATFVAVKFICSKDLPCEGVEVDDIDLAYTGTRGRITPQCRNVIPIITGKQNPRACVEVAPINSPSTD Homology
BLAST of MELO3C027268.jh1 vs. NCBI nr
Match: KAA0059156.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02532.1 exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 267 bits (682), Expect = 4.72e-90 Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. NCBI nr
Match: KAA0059139.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK21608.1 exopolygalacturonase-like [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (595), Expect = 3.93e-73 Identity = 112/131 (85.50%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. NCBI nr
Match: XP_008455507.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo]) HSP 1 Score: 236 bits (602), Expect = 7.78e-73 Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. NCBI nr
Match: XP_031744868.1 (exopolygalacturonase [Cucumis sativus]) HSP 1 Score: 227 bits (578), Expect = 1.87e-70 Identity = 110/131 (83.97%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. NCBI nr
Match: XP_011658673.1 (exopolygalacturonase [Cucumis sativus] >KAE8645719.1 hypothetical protein Csa_020328 [Cucumis sativus]) HSP 1 Score: 214 bits (546), Expect = 1.11e-65 Identity = 103/130 (79.23%), Postives = 116/130 (89.23%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy Swiss-Prot
Match: W8P8Q3 (Probable galacturan 1,4-alpha-galacturonidase SALK6 OS=Kali turgidum OX=151250 PE=1 SV=3) HSP 1 Score: 138.3 bits (347), Expect = 6.4e-32 Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.5e-31 Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 4.6e-30 Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 8.7e-29 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 1.5e-28 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UY77 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00110 PE=3 SV=1) HSP 1 Score: 267 bits (682), Expect = 2.28e-90 Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DDK3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00030 PE=3 SV=1) HSP 1 Score: 233 bits (595), Expect = 1.90e-73 Identity = 112/131 (85.50%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C129 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1) HSP 1 Score: 236 bits (602), Expect = 3.77e-73 Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BSV2 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00060 PE=3 SV=1) HSP 1 Score: 214 bits (546), Expect = 4.30e-63 Identity = 104/130 (80.00%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UTD3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00800 PE=3 SV=1) HSP 1 Score: 214 bits (546), Expect = 4.53e-63 Identity = 104/130 (80.00%), Postives = 113/130 (86.92%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 141.0 bits (354), Expect = 7.1e-34 Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 2.7e-33 Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 131.7 bits (330), Expect = 4.3e-31 Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of MELO3C027268.jh1 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 7.3e-31 Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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