MELO3C027053 (gene) Melon (DHL92) v4

Overview
NameMELO3C027053
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein TIC 214
Locationchr06: 22562458 .. 22563654 (-)
RNA-Seq ExpressionMELO3C027053
SyntenyMELO3C027053
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGAGAAATTGCTATATCATCTATTCGGAGTAGCGAACTGGGTTTGGATATTATGCTATCTTCAAAGGATTTAACTCTTACAGAATTAATTCAAGAAAAAGGTTATCCTTATAAGAGGAGTTTTGCTGAATCCATTGCAATATCTCAAAAAACGACTGAAATAGAACCAATAATCATTATGATTTGCTTGTTCCGAAAAATATCTCGTTTGGGGGAAGGGTTGGATTATGAGGGTTAGGGTTATGTAATCCAACCCCCGTTTGGGGGAAGGGTTATGTAACCCTAGTTTTAACTCCTTAATCCTTCCTCAACCCTTCTTCAACACTTCTTAATCCTTTTTCAACTTTTCCTCAATTCTTCTTCACAACATTATCATAACACTTCCTTCATAACACTTCTCCCAAACACATCTTATCATAACACTTCCTCCATAACCCTTCCCCCAAACACATCTTATTATAATCCTAGGTTTATCTTAACACTAGGTTTATCATAACCCTAACCCCCCATAACCCAACCCTTCCCTCAAACGGCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATAAAAATGATATCCAGAGAAATACAGCATTTTACAATGGAAATAAGGTGAAAACAGATGATCAAGTTTTAGATAAAACAAGCAAACATCTTGATAGATATCAAAATCAACTAAAAAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGCTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGCAAATTAGTTAATGCTACATTTTTCCTATATTGCCCGTACCTTATATGGTATATGAAGACAAAGAAATACACATATGGCACTCTCTTAGATTCTGATAGATGATATTAATTGAATTTAATGACGTATCTATTAGATTTAGAAATGAATCAAGAAAATATTCTTATTTCATTTTAAATTGAAAATTGCAGTCTAAATATTTTTTGTGCATGCAAAAATATACCAGACTTTTGTATACCTATCTGAAATTTTCAAAAAAAGGATTGCTAGATTTTATTAAAAAAAAAAAGAATAGAAATTCTTAATCAAAGTAAGATTATTGTGTATATCAAATTAAAACGAGTAACATTATTATTACTGATCAATAATAAT

mRNA sequence

CTAGAGAAATTGCTATATCATCTATTCGGAGTAGCGAACTGGGTTTGGATATTATGCTATCTTCAAAGGATTTAACTCTTACAGAATTAATTCAAGAAAAAGGTTATCCTTATAAGAGGAGTTTTGCTGAATCCATTGCAATATCTCAAAAAACGACTGAAATAGAACCAATAATCATTATGATTTGCTTGTTCCGAAAAATATCTCGTCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATAAAAATGATATCCAGAGAAATACAGCATTTTACAATGGAAATAAGGTGAAAACAGATGATCAAGTTTTAGATAAAACAAGCAAACATCTTGATAGATATCAAAATCAACTAAAAAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGCTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGCAAATTAGTTAATGCTACATTTTTCCTATATTGCCCGTACCTTATATGGTATATGAAGACAAAGAAATACACATATGGCACTCTCTTAGATTCTGATAGATGATATTAATTGAATTTAATGACGTATCTATTAGATTTAGAAATGAATCAAGAAAATATTCTTATTTCATTTTAAATTGAAAATTGCAGTCTAAATATTTTTTGTGCATGCAAAAATATACCAGACTTTTGTATACCTATCTGAAATTTTCAAAAAAAGGATTGCTAGATTTTATTAAAAAAAAAAAGAATAGAAATTCTTAATCAAAGTAAGATTATTGTGTATATCAAATTAAAACGAGTAACATTATTATTACTGATCAATAATAAT

Coding sequence (CDS)

ATGCTATCTTCAAAGGATTTAACTCTTACAGAATTAATTCAAGAAAAAGGTTATCCTTATAAGAGGAGTTTTGCTGAATCCATTGCAATATCTCAAAAAACGACTGAAATAGAACCAATAATCATTATGATTTGCTTGTTCCGAAAAATATCTCGTCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAA

Protein sequence

MLSSKDLTLTELIQEKGYPYKRSFAESIAISQKTTEIEPIIIMICLFRKISRPLEVVESLEF
Homology
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BLAST of MELO3C027053 vs. ExPASy Swiss-Prot
Match: Q4VZL0 (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-04
Identity = 22/28 (78.57%), Postives = 23/28 (82.14%), Query Frame = 0 

Query: 9    LTELIQEKGYPYKRSFAESIAISQKTTE 37
            L +  QEKGYPYKRSFAESIAI QK TE
Sbjct: 1735 LNQRYQEKGYPYKRSFAESIAIHQKRTE 1762

The following BLAST results are available for this feature:
BLAST of MELO3C027053 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C027053 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZL01.2e-0478.57Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2[more]
BLAST of MELO3C027053 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C027053 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027053.1MELO3C027053.1mRNA