MELO3C026648 (gene) Melon (DHL92) v4

Overview
NameMELO3C026648
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionDUF4283 domain-containing protein
Locationchr02: 17911771 .. 17913275 (+)
RNA-Seq ExpressionMELO3C026648
SyntenyMELO3C026648
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGTATTTTTTGATACAAAATACTAATGGTTTTCATATAAAACAAACCGTAAATATATCTTTAAAACTTTTGAAACCTTATGGACATTTTTTACATAATTTAGGAGCATTTTTTATAATTTAGCCTTAAAAGAAATAAGTCATATTAATAGAATTGATATTATAATGCTTTCCATGCTGACAAAGCTTTAGTCCATTTTAGTTCAAGCATACCTGCAAATCTTCTCTGTCAAAACAAAGGATGGACCACGGTAGGAAAGTACTCGGTAAGATTCGAAAAATGGTGCTCTGTGCATCATGCCACTCCAAAACTCATTCCTAGCTATGGAGGATGGACTTCTTTCAGAGGAATCCCCCTGCACCTGTGGAATATGAAGACTTTTCAGCAAATTGGAAAAGCTTGCGGAGGTTTGATTAAAGTGGCTGAGGAAACAAGATCAGCAAAAAATCTGATAGAAGCAAAGATAAAGATCAGATACAACTACTCAGGCTTCTTACCAGCAACTGTAAGGATTTTTGATAGTGACGGAAACAAATTCTCCATTCAAGTAGTTACTCATCCAGAAGGCAAATGGCTAACAGAAAGGAATGTAAGACTTCATGGCACCTTCAAGAGACAAGCTGCTGCTGCCTTTGATGAATTCAATCCTGATTCAGAACAGTTCTTCTTCGAAGGAACGGAGGCCATATCGTCGGATTTCCTTCCAACAGCTCCGACGGCCGTAAAAACAGCACACCGGATCAGCCATCTGCATTAAAATCTGTAATCATTAGACCTGACAAAGTTGCCACGTCGCCGAGCTTCTTAAATGAAGAGGTAGTTAATGATAGTAATTTGCATGCAACGGCTAATAAATCCGGTCTAGAGATATTACCTGGGATATCCAATGATGGCGTGTTGGATAAAGGAAAACAGAAGGTTGACATACAGCTTCAACCAAATTCTGCATTAAATTTGGACAAATCTAAAAGGAAAGTCTCCTTCAACTCTCCCTGTAATAAAACCAACATCTTCAACCCGGATTCTGCTCCAGCCAATCATTCTCCTTCATTAAGTTCTCCTGAAAAAAACAGAAAGTAAGTAGAGAGAGAAGTATCAAGAAGAGATTGCCCTCCACTCAGCCGAACTCCAAAGCCAATCAGAAGAAAGAGGAATTAATTACTCAACCAATTCAAATTGTGGCACACGAAGGGGAAGCTTCTAAAAAAGGTCTTTTTCTCACTGTTGACCTGGGAGATCTGCCAACTTTGGATTCAAACAAATCATTTGAAGACCACCACAGCTCTGATAATGCAGAAGTAATTGATATAACAAACACTGAAGTGGTTCCTGAGACACCTGAAATGAAAATGCAAGTTAACGAGAATTCAAATTCTTCCTCTGAAGTCAACTACAGAAAAACAAAACATGCTCATAAAAGAAAATATTACTACAGGAAAAAAGAGGAAAAAGAGAAGGATTCGGACTCAGAGGCCTTCAAAAAACAACTTACTTCCTGGTTAA

mRNA sequence

GGAAGTATTTTTTGATACAAAATACTAATGGTTTTCATATAAAACAAACCGTAAATATATCTTTAAAACTTTTGAAACCTTATGGACATTTTTTACATAATTTAGGAGCATTTTTTATAATTTAGCCTTAAAAGAAATAAGTCATATTAATAGAATTGATATTATAATGCTTTCCATGCTGACAAAGCTTTAGTCCATTTTAGTTCAAGCATACCTGCAAATCTTCTCTGTCAAAACAAAGGATGGACCACGGTAGGAAAGTACTCGGTAAGATTCGAAAAATGGTGCTCTGTGCATCATGCCACTCCAAAACTCATTCCTAGCTATGGAGGATGGACTTCTTTCAGAGGAATCCCCCTGCACCTGTGGAATATGAAGACTTTTCAGCAAATTGGAAAAGCTTGCGGAGGTTTGATTAAAGTGGCTGAGGAAACAAGATCAGCAAAAAATCTGATAGAAGCAAAGATAAAGATCAGATACAACTACTCAGGCTTCTTACCAGCAACTAGACAAGCTGCTGCTGCCTTTGATGAATTCAATCCTGATTCAGAACAGTTCTTCTTCGAAGGAACGGAGGCCATATCGTCGGATTTCCTTCCAACAGCTCCGACGGCCGTAAAAACAGCACACCGGATCAGCCATCTGCATTAAAATCTGTAATCATTAGACCTGACAAAGTTGCCACGTCGCCGAGCTTCTTAAATGAAGAGGTAGTTAATGATAGTAATTTGCATGCAACGGCTAATAAATCCGGTCTAGAGATATTACCTGGGATATCCAATGATGGCGTGTTGGATAAAGGAAAACAGAAGAAAGTAAGTAGAGAGAGAAGTATCAAGAAGAGATTGCCCTCCACTCAGCCGAACTCCAAAGCCAATCAGAAGAAAGAGGAATTAATTACTCAACCAATTCAAATTGTGGCACACGAAGGGGAAGCTTCTAAAAAAGGTCTTTTTCTCACTGTTGACCTGGGAGATCTGCCAACTTTGGATTCAAACAAATCATTTGAAGACCACCACAGCTCTGATAATGCAGAAGTAATTGATATAACAAACACTGAAGTGGTTCCTGAGACACCTGAAATGAAAATGCAAGTTAACGAGAATTCAAATTCTTCCTCTGAAGTCAACTACAGAAAAACAAAACATGCTCATAAAAGAAAATATTACTACAGGAAAAAAGAGGAAAAAGAGAAGGATTCGGACTCAGAGGCCTTCAAAAAACAACTTACTTCCTGGTTAA

Coding sequence (CDS)

ATGAAGACTTTTCAGCAAATTGGAAAAGCTTGCGGAGGTTTGATTAAAGTGGCTGAGGAAACAAGATCAGCAAAAAATCTGATAGAAGCAAAGATAAAGATCAGATACAACTACTCAGGCTTCTTACCAGCAACTAGACAAGCTGCTGCTGCCTTTGATGAATTCAATCCTGATTCAGAACAGTTCTTCTTCGAAGGAACGGAGGCCATATCGTCGGATTTCCTTCCAACAGCTCCGACGGCCGTAAAAACAGCACACCGGATCAGCCATCTGCATTAA

Protein sequence

MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPATRQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKTAHRISHLH
Homology
[Close]
BLAST of MELO3C026648 vs. NCBI nr
Match: KAA0046763.1 (hypothetical protein E6C27_scaffold216G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31
Identity = 82/123 (66.67%), Postives = 83/123 (67.48%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT               
Sbjct: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPATVRIFDSDGNKFSIQV 60

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 88
                                RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTA  +
Sbjct: 61  VTHPEGKWLTERNVRLHGTFKRQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAKVS 120

[Close]
BLAST of MELO3C026648 vs. NCBI nr
Match: TYK03139.1 (hypothetical protein E5676_scaffold11G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-24
Identity = 69/121 (57.02%), Postives = 77/121 (63.64%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           MKTFQQIGKACGGLIKVAEETRSAKNLIEA+IK+RYNYSGFLPA                
Sbjct: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFSVQV 60

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 86
                                RQAAAAFD+FNP+SEQFFF+G EAIS DFL T+    K+
Sbjct: 61  VTHPEGKWLIERNVRLHGTFKRQAAAAFDDFNPNSEQFFFKGMEAISPDFLSTSSDGRKS 120

[Close]
BLAST of MELO3C026648 vs. NCBI nr
Match: KAA0056565.1 (hypothetical protein E6C27_scaffold288G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 5.6e-24
Identity = 67/120 (55.83%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           M TFQQ+GKACGGLIKVAEETRSAKNL++A+IK+RYNYSGFLPA                
Sbjct: 302 MTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQV 361

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 85
                                RQAAAAFDEFNP+SEQFFFEG EAIS DFL T+    K+
Sbjct: 362 VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKS 421

[Close]
BLAST of MELO3C026648 vs. NCBI nr
Match: KAA0045262.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK28688.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 5.6e-24
Identity = 66/114 (57.89%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           M TFQQIGKACGGLIKVAEET++AKNLIEA++KIRYNYSGFLPA                
Sbjct: 228 MMTFQQIGKACGGLIKVAEETKTAKNLIEARLKIRYNYSGFLPANVKIFDQEGNKFIVQV 287

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTA 79
                                RQAAA+FD+FNP+SEQFFF+GTEAISSDFL T+
Sbjct: 288 VTHSEGKWLMERNVKLHGTFKRQAAASFDDFNPESEQFFFDGTEAISSDFLSTS 341

[Close]
BLAST of MELO3C026648 vs. NCBI nr
Match: TYK24247.1 (hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 5.6e-24
Identity = 67/120 (55.83%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           M TFQQ+GKACGGLIKVAEETRSAKNL++A+IK+RYNYSGFLPA                
Sbjct: 302 MTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQV 361

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 85
                                RQAAAAFDEFNP+SEQFFFEG EAIS DFL T+    K+
Sbjct: 362 VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKS 421

[Close]
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match: A0A5A7TT76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00460 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 82/123 (66.67%), Postives = 83/123 (67.48%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT               
Sbjct: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPATVRIFDSDGNKFSIQV 60

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 88
                                RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTA  +
Sbjct: 61  VTHPEGKWLTERNVRLHGTFKRQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAKVS 120

[Close]
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match: A0A5D3BYI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00140 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.2e-25
Identity = 69/121 (57.02%), Postives = 77/121 (63.64%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           MKTFQQIGKACGGLIKVAEETRSAKNLIEA+IK+RYNYSGFLPA                
Sbjct: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFSVQV 60

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 86
                                RQAAAAFD+FNP+SEQFFF+G EAIS DFL T+    K+
Sbjct: 61  VTHPEGKWLIERNVRLHGTFKRQAAAAFDDFNPNSEQFFFKGMEAISPDFLSTSSDGRKS 120

[Close]
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match: A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 66/114 (57.89%), Postives = 75/114 (65.79%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           M TFQQIGKACGGLIKVAEET++AKNLIEA++KIRYNYSGFLPA                
Sbjct: 228 MMTFQQIGKACGGLIKVAEETKTAKNLIEARLKIRYNYSGFLPANVKIFDQEGNKFIVQV 287

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTA 79
                                RQAAA+FD+FNP+SEQFFF+GTEAISSDFL T+
Sbjct: 288 VTHSEGKWLMERNVKLHGTFKRQAAASFDDFNPESEQFFFDGTEAISSDFLSTS 341

[Close]
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match: A0A5D3DKV0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00050 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 67/120 (55.83%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           M TFQQ+GKACGGLIKVAEETRSAKNL++A+IK+RYNYSGFLPA                
Sbjct: 302 MTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQV 361

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 85
                                RQAAAAFDEFNP+SEQFFFEG EAIS DFL T+    K+
Sbjct: 362 VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKS 421

[Close]
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match: A0A5A7UST0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00700 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 67/120 (55.83%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 1   MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPAT--------------- 60
           M TFQQ+GKACGGLIKVAEETRSAKNL++A+IK+RYNYSGFLPA                
Sbjct: 302 MTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNYSGFLPANVRIFDNEGNKFSIQV 361

Query: 61  ---------------------RQAAAAFDEFNPDSEQFFFEGTEAISSDFLPTAPTAVKT 85
                                RQAAAAFDEFNP+SEQFFFEG EAIS DFL T+    K+
Sbjct: 362 VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFEGMEAISPDFLSTSSDGRKS 421

The following BLAST results are available for this feature:
BLAST of MELO3C026648 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046763.12.8e-3166.67hypothetical protein E6C27_scaffold216G00460 [Cucumis melo var. makuwa][more]
TYK03139.11.5e-2457.02hypothetical protein E5676_scaffold11G00140 [Cucumis melo var. makuwa][more]
KAA0056565.15.6e-2455.83hypothetical protein E6C27_scaffold288G00700 [Cucumis melo var. makuwa][more]
KAA0045262.15.6e-2457.89LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK286... [more]
TYK24247.15.6e-2455.83hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa][more]
BLAST of MELO3C026648 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TT761.3e-3166.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BYI67.2e-2557.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DZ072.7e-2457.89LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3DKV02.7e-2455.83DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UST02.7e-2455.83DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C026648 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026648.1MELO3C026648.1mRNA