MELO3C026315 (gene) Melon (DHL92) v4

Overview
NameMELO3C026315
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr08: 28663820 .. 28664023 (+)
RNA-Seq ExpressionMELO3C026315
SyntenyMELO3C026315
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAAATGTAAAAAACAATTATTCGGGGATTCAAGAGAAGGGAGATGAACTAAGACTTACAAAGGGTAGTAGTAGTGTTGAGGGAGAGGAGACGCAACGTTCGAACCAAAACAGTAGCAGCGGCGTTCGAACAAAAATGGTAGGGATTTTGTGTGAGGGAGGAGATGGGAACGGAAGGGATGACTGGCGTCCAAATTGA

mRNA sequence

ATGGAAGAAAATGTAAAAAACAATTATTCGGGGATTCAAGAGAAGGGAGATGAACTAAGACTTACAAAGGGTAGTAGTAGTGTTGAGGGAGAGGAGACGCAACGTTCGAACCAAAACAGTAGCAGCGGCGTTCGAACAAAAATGGTAGGGATTTTGTGTGAGGGAGGAGATGGGAACGGAAGGGATGACTGGCGTCCAAATTGA

Coding sequence (CDS)

ATGGAAGAAAATGTAAAAAACAATTATTCGGGGATTCAAGAGAAGGGAGATGAACTAAGACTTACAAAGGGTAGTAGTAGTGTTGAGGGAGAGGAGACGCAACGTTCGAACCAAAACAGTAGCAGCGGCGTTCGAACAAAAATGGTAGGGATTTTGTGTGAGGGAGGAGATGGGAACGGAAGGGATGACTGGCGTCCAAATTGA

Protein sequence

MEENVKNNYSGIQEKGDELRLTKGSSSVEGEETQRSNQNSSSGVRTKMVGILCEGGDGNGRDDWRPN
Homology
BLAST of MELO3C026315 vs. NCBI nr
Match: KAA0039077.1 (uncharacterized protein E6C27_scaffold84G001750 [Cucumis melo var. makuwa] >TYJ99728.1 uncharacterized protein E5676_scaffold252G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 6   KNNYSGIQEKGDELRLTKGSSSVEGEETQRSNQNSSSGVRTKMVGILCEGGD 58
           K NYSGIQE GDELRLTKGSS VEGEETQRSN+N  + V+T+ VGIL + GD
Sbjct: 158 KQNYSGIQENGDELRLTKGSSGVEGEETQRSNRNDMAEVQTETVGILRDEGD 209

BLAST of MELO3C026315 vs. NCBI nr
Match: KAA0054207.1 (uncharacterized protein E6C27_scaffold131G001440 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 7  NNYSGIQEKGDELRLTKGSSSVEGEETQRSNQNSSSGVRTKMVGILCEGGDGNGR 62
          N  + ++EKGDELRL KGSSSVEGEE +RSN+N SS VRT+ VGIL E GDGNGR
Sbjct: 42 NAEAKLKEKGDELRLRKGSSSVEGEEARRSNRNGSSDVRTETVGILRERGDGNGR 96

BLAST of MELO3C026315 vs. ExPASy TrEMBL
Match: A0A5D3BNK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00020 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-09
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 6   KNNYSGIQEKGDELRLTKGSSSVEGEETQRSNQNSSSGVRTKMVGILCEGGD 58
           K NYSGIQE GDELRLTKGSS VEGEETQRSN+N  + V+T+ VGIL + GD
Sbjct: 158 KQNYSGIQENGDELRLTKGSSGVEGEETQRSNRNDMAEVQTETVGILRDEGD 209

BLAST of MELO3C026315 vs. ExPASy TrEMBL
Match: A0A5A7UI22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001440 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-09
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 7  NNYSGIQEKGDELRLTKGSSSVEGEETQRSNQNSSSGVRTKMVGILCEGGDGNGR 62
          N  + ++EKGDELRL KGSSSVEGEE +RSN+N SS VRT+ VGIL E GDGNGR
Sbjct: 42 NAEAKLKEKGDELRLRKGSSSVEGEEARRSNRNGSSDVRTETVGILRERGDGNGR 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0039077.12.8e-0973.08uncharacterized protein E6C27_scaffold84G001750 [Cucumis melo var. makuwa] >TYJ9... [more]
KAA0054207.14.9e-0970.91uncharacterized protein E6C27_scaffold131G001440 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BNK91.4e-0973.08Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UI222.3e-0970.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026315.1MELO3C026315.1mRNA