MELO3C026028 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACATTCAAATCTTAGTTTCCATCTCTCTCCCAAAACTCGATTCATTAACTCCCTCACCTCCTCCCTCTCCTCGCCATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGTCGACTCCGCTGCCATCTTCTCTGCCACTACCACTGCTGTCTCCTCCATTATCGGCAAACCCGAAAATGTATAAACCTTTTCTACCTTCTTCAAATACACACTTCCTTCCATCCTTTCTTTTTCTCTCATCCTAATTAATACATCCTACAATGCACTTTACCTCCTACATTATTTAATTGGTTAATTGAAATTACCATAAATTATTGTTTTTAGCTGAATTATTATAGATGACAAGAAAAATAAAACTATTTACTTGATATATATCAAAAAAAAAAAAAAAATTTAAAAGGGCTACAAGTGATATTGTTGAATTTTACTATTTTTAAAAATATTCTTTTTTTTTTTTTAAATATTTGTTTTTCGGTTTGTGCTTTGGAGCCAAATGCCTAATTACGGCAATGCAAAAGTTTAATGCAAACATTCCTAACAATTCTTTTCAAAAGAAGTAAAATTTCATTTTTGTTAACTCTATCTTTATTTATATAATATTAAATTTACTATAATCCATTCATTTAAAGTTTTGTGCCTTTCTGTACAAAATCCTTTTTCCTTCGCTTTATCTTCTCTTATAGGTGTTTGATTGTTTTCAGAATAATATAATATCAAATTTACTTTCATTATTCATGAGTTCAATTTTTTGGATCAATTTGTAATTCAAAAGGGTAGAGAGTAAGGTGTTCAAAATCCTGTACTTTTACTTTCTTTTCAATTAAAATTGATTCACTTATCCTTGAATTTTTTTTCCATATTTCTAACACATAGGTAGGAAGTCAATGAATGATTTAAGAGTCTTACAAAAATCTCAATTTACTGTCATCCATCGTTTTGAGTTTGATTGGCGATTTAACGCTCTTCATTAATTAGGCCTGCAAGTACCTTTCTCCTTTCTTTCTCCAACCATCAATTTGACAGTTCTTTTTCTCCAACAGTATGTGATGGTGTTGCTGAACGGGTCGGTGCCAATATCGTTCGGAGGGAACGGGGATCCAGCAGTGTTCGCGGAGGTGGTGTCCATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGTTGATCTCAACCCTGGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCACCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCATTTCCAAATTATGACTCTCCCCGGTGGCTGCCTTTTTCACCTCTTCCAACTTTCATATATATATTATATACGCTTTTCTCTTTATAATTATAATTTCTTTATGGTCCTGTTCTGTTTGTCTGACTTTCTCTATTATTTCTGTCTGTTGACAGTTTATTCGAAAAGTCAATCAGTTGTTTTGTTTCTTTTAATTACAACACGTGAGGTGAATGAGACAAACTTTTTAACC ACATTCAAATCTTAGTTTCCATCTCTCTCCCAAAACTCGATTCATTAACTCCCTCACCTCCTCCCTCTCCTCGCCATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGTCGACTCCGCTGCCATCTTCTCTGCCACTACCACTGCTGTCTCCTCCATTATCGGCAAACCCGAAAATTATGTGATGGTGTTGCTGAACGGGTCGGTGCCAATATCGTTCGGAGGGAACGGGGATCCAGCAGTGTTCGCGGAGGTGGTGTCCATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGTTGATCTCAACCCTGGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCACCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCATTTCCAAATTATGACTCTCCCCGGTGGCTGCCTTTTTCACCTCTTCCAACTTTCATATATATATTATATACGCTTTTCTCTTTATAATTATAATTTCTTTATGGTCCTGTTCTGTTTGTCTGACTTTCTCTATTATTTCTGTCTGTTGACAGTTTATTCGAAAAGTCAATCAGTTGTTTTGTTTCTTTTAATTACAACACGTGAGGTGAATGAGACAAACTTTTTAACC ATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGTCGACTCCGCTGCCATCTTCTCTGCCACTACCACTGCTGTCTCCTCCATTATCGGCAAACCCGAAAATTATGTGATGGTGTTGCTGAACGGGTCGGTGCCAATATCGTTCGGAGGGAACGGGGATCCAGCAGTGTTCGCGGAGGTGGTGTCCATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGTTGATCTCAACCCTGGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCACCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCATTTCCAAATTATGA MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVFAEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL Homology
BLAST of MELO3C026028 vs. NCBI nr
Match: XP_008464238.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo]) HSP 1 Score: 217.2 bits (552), Expect = 7.0e-53 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MELO3C026028 vs. NCBI nr
Match: XP_004148599.1 (macrophage migration inhibitory factor homolog [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 7.7e-52 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of MELO3C026028 vs. NCBI nr
Match: XP_038883562.1 (macrophage migration inhibitory factor homolog [Benincasa hispida]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MELO3C026028 vs. NCBI nr
Match: XP_022949815.1 (macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_023543101.1 macrophage migration inhibitory factor homolog [Cucurbita pepo subsp. pepo] >KAG6603558.1 hypothetical protein SDJN03_04167, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033748.1 hypothetical protein SDJN02_03473, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.9 bits (494), Expect = 3.7e-46 Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of MELO3C026028 vs. NCBI nr
Match: XP_022144090.1 (macrophage migration inhibitory factor homolog [Momordica charantia]) HSP 1 Score: 194.1 bits (492), Expect = 6.4e-46 Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09 Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08 Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4) HSP 1 Score: 55.1 bits (131), Expect = 6.0e-07 Identity = 32/105 (30.48%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy Swiss-Prot
Match: O44786 (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 GN=MIF PE=3 SV=3) HSP 1 Score: 53.5 bits (127), Expect = 1.8e-06 Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy Swiss-Prot
Match: P80177 (Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6) HSP 1 Score: 49.3 bits (116), Expect = 3.3e-05 Identity = 30/105 (28.57%), Postives = 48/105 (45.71%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy TrEMBL
Match: A0A1S3CL09 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103502168 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.4e-53 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy TrEMBL
Match: A0A0A0L1F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy TrEMBL
Match: A0A6J1GDU8 (macrophage migration inhibitory factor homolog OS=Cucurbita moschata OX=3662 GN=LOC111453099 PE=3 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.8e-46 Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy TrEMBL
Match: A0A6J1CQN7 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111013868 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.1e-46 Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of MELO3C026028 vs. ExPASy TrEMBL
Match: A0A6J1IKS8 (macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LOC111478343 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45 Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of MELO3C026028 vs. TAIR 10
Match: AT5G01650.1 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 128.3 bits (321), Expect = 4.0e-30 Identity = 60/103 (58.25%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of MELO3C026028 vs. TAIR 10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 128.3 bits (321), Expect = 4.0e-30 Identity = 60/103 (58.25%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of MELO3C026028 vs. TAIR 10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 120.9 bits (302), Expect = 6.4e-28 Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of MELO3C026028 vs. TAIR 10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19 Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of MELO3C026028 vs. TAIR 10
Match: AT5G57170.1 (Tautomerase/MIF superfamily protein ) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-19 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|