MELO3C025809.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C025809.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUbiquitin-like protein ATG12
Locationchr04: 18218294 .. 18221075 (+)
RNA-Seq ExpressionMELO3C025809.jh1
SyntenyMELO3C025809.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAGAATTCATAGTTGACAATGAACTAAAAATTTGGGGCTTTTGGCATTGCAAAGCCCAAACTCAGGCCACGAACAATACGGAATTGCCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACCCCACGAATTCTGCAGTCCACGGCCAAGGAAAACGATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGGTGAGCTTTAAAGGATGTATGAACAAGTCCAACTGTTTATTTTCCTATGTTTGATGAATCCAACATTCAAACTTTATTCAGTTTTCAGACTTAATTGTTCTGATGCAGAAGAAGATTTGTTTTGCAATTGTTGTTTTATTACGGTGCTTTCCTAATGACGTTTTCGATCAAGATTCATCGTGATTTATTCTGGTTTCGTTTCTGGCAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGGTTTGTATTATGTCAATTTTCGTCAGTTTATAGATTTAAAGGTTAAAAATTTGTATCATACTGTTTAAACTGTAAATTGGAAATCAATCTTGATGCTTGTGAAAACTTTTGATAATTTGATTTGATTAAAAAACTGAACTTTTACCGTCTGATTCTAGTAATCATGTATACCTATGTAGGTAAGGTTGTGTGTATGTGTGTGATGTTCTCTGAGTGAGCTAAACGGACTAGGCTAATAGATGAAGAAGACGACCAATCTAAGAGCCGAAGGAATGAAGCTTAAACTCTGTTGTTACACAAGTATTAGATCCCATGGATACAATGCCACATCCTTATCCCGTGCAAAATTCACATTTCAATCAAGATATCATTTTTGTCGGGAGTGTGACCAAAGTGCCACATTGCATAGATAAGGGAAAATTATGTGTATATTTGTAAGAACAACTATGTTCAATAGTATGATAACTTTGGGTGAGATATAAAACAAAGTTGCGAGAGTTTATGCCCTAAGTGGGCAATATCATACTATTGCAAAATATGTGGAGGCGTTGGAGGGTTGTTGTCCTCACAATTATCATGTGGATAATCACTGAAACTTTGTTGAAGATTTTGTAAGGATTTTGGGGGCCTTATTAGGTTCTCTGTTAGTTTCTCTCGTTTCTCGTTGACTTACAATTTACTCGAATAGAACCCCTTCTTGTAGTTGGCTCTCTTTTTTATGGGCTTCTTGTTTAACCGTGTTTTTTCTTCCATTTTTCTCAATGTTCGGCTTTTCATCCAAAAAATGAACAAATAAACAAAAATTATTAATTATGAGAACTTGAAGAAATTTTCAATGGATAATCGATGACTGATTAATGACTATTTGGGGGGGTGCTATATCCCTGTTATGCCGTGAATTTTTTCTGCACATGACTTGTGGTATTTATAAAATCTGGAATAAACATATAGAATCACCGGTCTTAGAATGTGCAGTTTTGTAAATTTTATACAGCAGCTCATCCATGAAAGTTCAACTTTTTGGAATTTGGTTTTCTACATTTGCAAGTTTATGGAAAACGTTCATTCACATATTTCATACATTTGACAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGGTATTCATCTGACTTGTGGAATAATCTCTTTTCCATCTGCCAATTCATTTGAAATTAATGACACTTCTCTATGCTAATTGTTTATATTCTTTGAAGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATGTGAGTTGATATTGACTCATTTCTTCTCTTTATGTTCAAGTTGCGTTTGTACACTGTTTATATTAACTTTTAGAAGAAAAGAAAAGAGGTGAGGGATGTGTGTGTGTGTGTTGGGGGGAGGGTGAATTGGTTGGAATCTATCTTAAAAAAATCTATTTATTGGCCGGTCAAAGCCTGTCATCTAAACTTAGGGGGTATATTCATTGAAGGTGTAGTGTAGACTTCTGATGTTGATGCTGGTCATGAATCATTCTTGAAAATACCCATCATTGTATATTTTTATGAGGTGAAGGGAAAAGGCTTGAGCAATCAAAATTTGAAAACTTCCTGAAGCAAGATATCTGTAAGAACTCTTAGATTATCATGAAACAAAATATAGCATAAGATCATATGAGTAACCTTAAATGTTTTTTTTATCACCCTTCCCCGAGGGTAATTATTCTCGACTTCATAGCAATTTTTTAATCTGTTTCTTTACTTAGGTATACATATATGGTTTTTCATATCCACATGCATCTAGAGTTTTATCATCTTGTGGATTATTCTTTTTTGTGTGTCTATTTGCAGAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAATTTGCAGCATGGTAATGCTGAGTGCTGAGGCTGTAAATAGTATCTTGAACAGTTCATTCTAAGTACTGTGATTTTAAACTCACCCATTACGAACTATAGTGGTAGTAATCCTTCATATTATTGGCTGCTTTCCCCAATGAAAAACGAATCAGTCAAGTTCTAGAGTCATACTTGTCAAGGTCCAGAGTTTGTAAATTAACTGTTTATTTGATCGACGTCTTTAATTAATTGTTTTAAGGTTGAATATGTTAACACAAGGATGTATTGTTCCAAGATATGGAAGCTCAAATTCTTGATTACCCTACTCAGTTTCATATTTTTCTTTTTACAACGTAACAGTTGTTGAGACCAATACAAATCCTCATAAGTGCA

mRNA sequence

TCTAGAATTCATAGTTGACAATGAACTAAAAATTTGGGGCTTTTGGCATTGCAAAGCCCAAACTCAGGCCACGAACAATACGGAATTGCCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACCCCACGAATTCTGCAGTCCACGGCCAAGGAAAACGATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAATTTGCAGCATGGTAATGCTGAGTGCTGAGGCTGTAAATAGTATCTTGAACAGTTCATTCTAAGTACTGTGATTTTAAACTCACCCATTACGAACTATAGTGGTAGTAATCCTTCATATTATTGGCTGCTTTCCCCAATGAAAAACGAATCAGTCAAGTTCTAGAGTCATACTTGTCAAGGTCCAGAGTTTGTAAATTAACTGTTTATTTGATCGACGTCTTTAATTAATTGTTTTAAGGTTGAATATGTTAACACAAGGATGTATTGTTCCAAGATATGGAAGCTCAAATTCTTGATTACCCTACTCAGTTTCATATTTTTCTTTTTACAACGTAACAGTTGTTGAGACCAATACAAATCCTCATAAGTGCA

Coding sequence (CDS)

ATGACTTCTACAGAGTCGTCCACTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCAACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCTGGCACAGACAAATTTATTAAAGTTATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTATTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATAACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA

Protein sequence

MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Homology
[Close]
BLAST of MELO3C025809.jh1 vs. NCBI nr
Match: XP_008464001.1 (PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo])

HSP 1 Score: 191 bits (484), Expect = 4.58e-61
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. NCBI nr
Match: XP_004151012.1 (ubiquitin-like protein ATG12 [Cucumis sativus] >KGN59786.1 hypothetical protein Csa_001664 [Cucumis sativus])

HSP 1 Score: 189 bits (480), Expect = 1.87e-60
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MTSTESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. NCBI nr
Match: XP_038878493.1 (ubiquitin-like protein ATG12 [Benincasa hispida])

HSP 1 Score: 187 bits (475), Expect = 1.08e-59
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M STESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. NCBI nr
Match: XP_022955552.1 (ubiquitin-like protein ATG12 [Cucurbita moschata] >XP_023526053.1 ubiquitin-like protein ATG12 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6581816.1 Ubiquitin-like protein ATG12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018264.1 Ubiquitin-like protein ATG12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178 bits (452), Expect = 3.50e-56
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M S ESS+SA+KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASMESSSSAKKVVVLLRSIGDAPILKQNKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. NCBI nr
Match: XP_022153405.1 (ubiquitin-like protein ATG12 [Momordica charantia] >XP_022153406.1 ubiquitin-like protein ATG12 [Momordica charantia])

HSP 1 Score: 178 bits (451), Expect = 4.97e-56
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M S ESS+S RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy Swiss-Prot
Match: Q1SF86 (Ubiquitin-like protein ATG12 OS=Medicago truncatula OX=3880 GN=ATG12 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.8e-37
Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M + ES TS RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VN
Sbjct: 1  MAAAESPTSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRESLFVYVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          SAFSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 61 SAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy Swiss-Prot
Match: Q8S924 (Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana OX=3702 GN=ATG12A PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.4e-36
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 0 

Query: 2  TSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNS 61
          T + S +S RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNS
Sbjct: 3  TESSSPSSVRKVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVNS 62

Query: 62 AFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          AFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 63 AFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy Swiss-Prot
Match: Q9LVK3 (Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana OX=3702 GN=ATG12B PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.9e-34
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 0 

Query: 3  STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
          +TES  S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSA
Sbjct: 2  ATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSA 61

Query: 63 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          FSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 FSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy Swiss-Prot
Match: A2YAG8 (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica OX=39946 GN=ATG12 PE=3 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 3.3e-30
Identity = 59/85 (69.41%), Postives = 75/85 (88.24%), Query Frame = 0 

Query: 11 RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDET 70
          +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE 
Sbjct: 9  KKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPNPDEL 68

Query: 71 VIDLYNNFGIDGKLVVNYACSMAWG 96
          +IDLYNNFGIDG+LVVNYA SMAWG
Sbjct: 69 IIDLYNNFGIDGQLVVNYASSMAWG 93

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy Swiss-Prot
Match: Q69NP0 (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG12 PE=3 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 3.3e-30
Identity = 59/85 (69.41%), Postives = 75/85 (88.24%), Query Frame = 0 

Query: 11 RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDET 70
          +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE 
Sbjct: 9  KKVVVHFRSTGNAPQLKQSKFKIGGNEKFLKIIDFLRRQIHQDTVFLYVNSAFSPNPDEL 68

Query: 71 VIDLYNNFGIDGKLVVNYACSMAWG 96
          +IDLYNNFGIDG+LVVNYA SMAWG
Sbjct: 69 IIDLYNNFGIDGQLVVNYASSMAWG 93

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CKI1 (Ubiquitin-like protein ATG12 OS=Cucumis melo OX=3656 GN=LOC103501992 PE=3 SV=1)

HSP 1 Score: 191 bits (484), Expect = 2.22e-61
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LIA6 (Ubiquitin-like protein ATG12 OS=Cucumis sativus OX=3659 GN=Csa_3G846020 PE=3 SV=1)

HSP 1 Score: 189 bits (480), Expect = 9.05e-61
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          MTSTESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GTZ1 (Ubiquitin-like protein ATG12 OS=Cucurbita moschata OX=3662 GN=LOC111457534 PE=3 SV=1)

HSP 1 Score: 178 bits (452), Expect = 1.69e-56
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M S ESS+SA+KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASMESSSSAKKVVVLLRSIGDAPILKQNKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DGR5 (Ubiquitin-like protein ATG12 OS=Momordica charantia OX=3673 GN=LOC111020917 PE=3 SV=1)

HSP 1 Score: 178 bits (451), Expect = 2.41e-56
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M S ESS+S RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASKESSSSDRKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVNDLYDNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J054 (Ubiquitin-like protein ATG12 OS=Cucurbita maxima OX=3661 GN=LOC111480033 PE=3 SV=1)

HSP 1 Score: 177 bits (448), Expect = 6.91e-56
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MTSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60
          M S ESS S++KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN
Sbjct: 1  MASMESSNSSKKVVVLLRSIGDAPILKQNKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVN 60

Query: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95
          SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Sbjct: 61 SAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 95

[Close]
BLAST of MELO3C025809.jh1 vs. TAIR 10
Match: AT1G54210.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-37
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 0 

Query: 2  TSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNS 61
          T + S +S RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNS
Sbjct: 3  TESSSPSSVRKVVVHLRATGGAPILKQSKFKIPGTDKFAKVIDFLRRQLHSDSLFVYVNS 62

Query: 62 AFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          AFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 63 AFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 96

[Close]
BLAST of MELO3C025809.jh1 vs. TAIR 10
Match: AT3G13970.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-35
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 0 

Query: 3  STESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSA 62
          +TES  S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSA
Sbjct: 2  ATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSA 61

Query: 63 FSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
          FSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Sbjct: 62 FSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG 94

[Close]
BLAST of MELO3C025809.jh1 vs. TAIR 10
Match: AT1G54210.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 5.1e-10
Identity = 40/94 (42.55%), Postives = 43/94 (45.74%), Query Frame = 0 

Query: 2  TSTESSTSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNS 61
          T + S +S RKVVV LRATG APILKQ+KFK                             
Sbjct: 3  TESSSPSSVRKVVVHLRATGGAPILKQSKFK----------------------------- 52

Query: 62 AFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG 96
                         NFG DGKLVVNYACSMAWG
Sbjct: 63 ---------------NFGFDGKLVVNYACSMAWG 52

The following BLAST results are available for this feature:
BLAST of MELO3C025809.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464001.14.58e-61100.00PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo][more]
XP_004151012.11.87e-6098.95ubiquitin-like protein ATG12 [Cucumis sativus] >KGN59786.1 hypothetical protein ... [more]
XP_038878493.11.08e-5997.89ubiquitin-like protein ATG12 [Benincasa hispida][more]
XP_022955552.13.50e-5692.63ubiquitin-like protein ATG12 [Cucurbita moschata] >XP_023526053.1 ubiquitin-like... [more]
XP_022153405.14.97e-5693.68ubiquitin-like protein ATG12 [Momordica charantia] >XP_022153406.1 ubiquitin-lik... [more]
BLAST of MELO3C025809.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1SF862.8e-3777.89Ubiquitin-like protein ATG12 OS=Medicago truncatula OX=3880 GN=ATG12 PE=3 SV=1[more]
Q8S9242.4e-3676.60Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana OX=3702 GN=ATG12A PE=1 SV=... [more]
Q9LVK32.9e-3473.12Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana OX=3702 GN=ATG12B PE=1 SV=... [more]
A2YAG83.3e-3069.41Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica OX=39946 GN=ATG12 PE=... [more]
Q69NP03.3e-3069.41Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG12 P... [more]
BLAST of MELO3C025809.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CKI12.22e-61100.00Ubiquitin-like protein ATG12 OS=Cucumis melo OX=3656 GN=LOC103501992 PE=3 SV=1[more]
A0A0A0LIA69.05e-6198.95Ubiquitin-like protein ATG12 OS=Cucumis sativus OX=3659 GN=Csa_3G846020 PE=3 SV=... [more]
A0A6J1GTZ11.69e-5692.63Ubiquitin-like protein ATG12 OS=Cucurbita moschata OX=3662 GN=LOC111457534 PE=3 ... [more]
A0A6J1DGR52.41e-5693.68Ubiquitin-like protein ATG12 OS=Momordica charantia OX=3673 GN=LOC111020917 PE=3... [more]
A0A6J1J0546.91e-5691.58Ubiquitin-like protein ATG12 OS=Cucurbita maxima OX=3661 GN=LOC111480033 PE=3 SV... [more]
BLAST of MELO3C025809.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G54210.11.7e-3776.60Ubiquitin-like superfamily protein [more]
AT3G13970.12.0e-3573.12Ubiquitin-like superfamily protein [more]
AT1G54210.25.1e-1042.55Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 6..95
e-value: 2.8E-35
score: 122.8
NoneNo IPR availablePANTHERPTHR13385:SF2UBIQUITIN-LIKE PROTEIN ATG12Bcoord: 3..95
NoneNo IPR availableCDDcd01612Ubl_ATG12coord: 12..94
e-value: 1.26856E-41
score: 129.559
IPR007242Ubiquitin-like protein Atg12PFAMPF04110APG12coord: 12..95
e-value: 8.6E-30
score: 103.0
IPR007242Ubiquitin-like protein Atg12PANTHERPTHR13385AUTOPHAGY PROTEIN 12coord: 3..95
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 11..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025809.jh1.t1MELO3C025809.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000045 autophagosome assembly
cellular_component GO:0005737 cytoplasm