MELO3C025467.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C025467.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	photosynthetic NDH subunit of lumenal location 1, chloroplastic
Location	chr09: 6070754 .. 6075931 (+)
RNA-Seq Expression	MELO3C025467.jh1
Synteny	MELO3C025467.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAGGAAGAAAGAAAAGAAACAACAGCAGAAAGAGTGTGGAATATGACCACAAAAACCCAACCCAATTAGATATACCATTCTCGGCTTCCATTTTCCAATTTTCCATTTTATGAGAGCTTCTCTTTATCAGATATGGCCGTTTCAACCTCTTGCCTGAGTTGGGTTCCCACCACTGCATCCAATTGGAAGGTTAGTCTATTTATTTTTATTTTCCGATCTTGCAGGACCCAATTCTTCCTTCTCATTCTACTTTAATTCCAGCTGAAGTTGCTTCCTTTCAATGAGCCTACAACAGCTACTTCTTCATTTTCTTCCTCTAGTACCATCAATTGCTCAATTGAGAGAACTTCTCGTGATGAAGGTAAGATTTGCAATCTTGAGTTCAGTGCTTTGAATCCAGGAGCTGTGTTAGAGATTTGTAGTTTCAGAATGACTGCCATGCTGATTTTAAAAGAATGTGGTTTTCCATTTGGTTTTGTTACTTGTAGGATGGAAATGTTTATTTGGTACTTATTTGGATTGCTTATCTTGGAATTCGCGAGTAAATTTAGAGTTCTGTCTGTAGTTATATGAACTTTGTAGCTTGCATACAAGATGTTTGTAGAAATTTGTAAACCGAAATTGCTTAGAAGAAATGGGTTCAAAATCATTATGGTAACCTTCTTGGGATTGAAGTGTTACGAGTTTACTTGGCCACCAAATGTAGTACTGACTTAGGTAGTTTTTTGGCTTTTATAGTGGGATTGTTCACCTCTTGTGGATTTTGATTCAGTTCTACTTGGAGCTTTTCTTTTCCTTCCTTGTAGTTGCTTCTTGAGCCTGGATATCCTTAATGATCCGTGGTAATATGATGATAATTAACATTTAGGCATTTACAATAGAAGGCCGCTTTTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTGGGTGCGAGTCCCCTCTTTGCTCAAGGTATAAATTTTCAACTTTCTCTAATGATCTAATGTTGGATTCTAAACTAATATTGTGATTGTTATGTGTAGAAGTCCCAAAGAATTATCGAGCATTTGTAGACTATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGTGAGAAAATTTCAATTTGCAGAAACATGAGATGCATGTAGTAACGCAAAAAATATACTAAAACAACAGTTTCCAAACGTTCCTTGTCTAGGAATTTGATTTTCGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGACATCCATGAAGAAGGGCCATTAGATGAGGTAAAAGAACCTTCCATCTACATCACATTTCAAAATCTGATAAAAGAAGTATGAACAGTTTAACATGACTGATGCAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGTTACCATATATGACATGAAGGAGGTTTGCACTTTTCTGTCTCTGAGATCAATTGGTCCATGTAATATTATCTTGAAATTTGTTTCTGTGACATCTTTTTTTATCTTTTATTCTCTTGTTTCAGCGAACGATTGATGGGAAAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATTCTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAACGGTAAGCTCATATTTTATTAGAATTTTAGACCGTTCCATTTTTTTTTTTTTTATTTATTTATCAGCTGTAAATCCCATGTTTTTTTAACTCTAGGATAGTTTACCCAAAACAACTTATAAAGAATATCAAATTGAGCTATTCAGTTTAGAAAGAGAGAGAACTGGAAAATTTTCAAACAACAGAATTGAAGTTAACCAAACTCATTTTATCAATTTGTATTATGCAATTCCGTACTAACTCATATCTAACCTATACTTTTAGTTTTTGGAGTGAATATAATCCGATTTATGTTAAGTTCCCAAGTTCTAGCTAATGATTAAAACTATTGATAAAGAGACGAAGAGCAAACACAATTTTTATGTGAAAACCGGGAGAAAAACCATGGCACAAATCTCTCTTTTATTATTTTCTCATAATAACAAATGATACTAGGAAGAAATAAATAGACTACAACGAGAAATAAAAAAGGAAAAAATATTAGGTCAATTCTTCCCCTAGACTAAGTCCACTAATCTAACACTCCCTTTAAGTTAGGATGTACATATCAATGAGACCCAACTTGCTAACACAAAAGTCAAAGTTCTGTCTTAAAAGTCCCTTAGTGAGGACATCATCAACTAGTTGGCTTGAAGGAATGTACGGAATGCATATGCTACCACTGTGCAGCCTTTCTTTGATGAAGTGTCGATCAATCTCAACATGTTTAGTTCATGTTGAATTAGATTGTTGCGATGCTAATGGTTGCCTTGTTATCACAAAATAATTTCATATCATACAAAGCTTTATGGAGCCAAATTTTCACTCATAGTCCTGTACTTGGTCGCAACACTGCTTCTGGCCATGACCCCTTGCTTCTTACCCTTCCAAATTACAAGATTGCCTCATAAAAGGTACAATAACCGAAGGTAGATTTCCGGTCAACAATTGGCCCTGCCCAATCTGAATCAGTATAAACCCTCAATAGTTTTCATGTTCGTCTTTCTGAACAGTAGTCCTTTACCAGGAGTCGTTTTTAAGTGTCTCAGGATTCTGTTTATAGCATCCATGTGTTCCTCGTTGGGAGCCTACATGAACACTCACAGTACTCACAACAAAGGAAATATCTGGTTAAGTATGGGCAAGTAAATCAACTTACTCACAAGGCATTAATATTGTTCTTTATTAACTAGAACTTTATCATCTAAATTTTCCAGTTTAAAATTGAATTCAATGGGAGTATCAAGAGGACGATACCCTAGCATACTTGTCTTCATCAGCAAATCAAGGGTATACTTCCTCTAAGATATGGAGATACCTTCTTTAGATCTGGCTACCTCCATTACAAGGAAATATTCATATTTACCAAGTCTTTGATTTCAAACTCATGAATCCTCTTTGAGGCAAATTTCAAAACAAACTTCCATCGGGAAGGGAATTGGTCTTTGGCCTAGTATACGCCCTTGAACTACATCAAACTTAGAATTAAGACCAACAAGAAAGTCATAATTCCTGTCAATCTCTTCAATTCTAGAATATTGCAAACCATCATTGGGACTGCTCCAGACTACTTCTCTGCATAGGTCCATAGGTCCATTTCCGGCCATAAAAGAGAAAGCTTATTAAAAAAGGATGTGACATCTCTGGTTCATTCATGAACTTGCTTAGCGCGTATAAGCAAGAAGCATTCTAACGTTTGGAGTATATTGTCTGGGTTGTGTCCCAAAAATATTTAGCAGTTGCAACGCACAGTAAGGGTTTGTCAATATGTGGTTCCGTACTATTGCTCAATGTGGATCAAAGAAGAGAGTCATCTGCCTTTCAGTGCCGTTCTTGTTTTTCCTGTCAGAAAACCAAATTTATGTCAGCGGACCATTTTCAGTGACTGAAACCATGAGAAATAGTTATTGTTAGTCAATTTTTCCCTGAAAAATATCTTATAGACTGTGCCATTGTATTAGTCACATAAGAAAAGGATAAATTGGGGAATGAGGTTATCGAATTCTCATAATACATCAGTATAGCTGTATGAAGGCCATGACTAAGAGTGTTGAATGTCACCCCTAAGGTAGTCTCAATTGCTTTAATCTATTATCAAAGCACTTCTAGTTGTTGGTAAGCTATACCCGAAGAAGAAGCGAAAGCTTGAACGTTAGGGTTGGAATGTGCCAAAGACTCGTCGACCTCAAATGTTGGGTGAAATTTGAGGATTCCTAACATCGGGATGATAACTAAGGTCAATGGGTGGTAGGGCATACAGAATTGATTGTAGAAGCGGTGGTGGCCGGTCGAAATTAAGTGGCAGTTCATGGATCGGTACGTGGGGGACATTATAGTCCGCAAATGAAGACAAGGGTGACACAGGTAGATCAGCTGGCGGTGCCTATATAGGATGGCCTATGTGTGTAACTTCGGCGAAGACTGGTGCGACAAAAAAAGTTGCGGAATTAAGTCTAAAGGCGATGGAACCATTCATCCGTGTAGCGATAATACGAGGATCGACGGCAGTGCTAATATCGACAATTGTCTCCTTTGTTTGGTTTGGTTTCTATCACGAGTTGTACTATCCAAGGTTTGATCACTATCTCGCTCTGATACCATATTGAAAAAGAGACAAAGAGCTAACACAATTTTTACATGGAGACCCTAGTTCAAGGAGAAAAGTCACGATGCAAATCTGTTCTTTATTATTTTCTCTAATAACAAATGATACAAGGGAAAATGAATAGACTACATTGACAAATAAAAAAAGGAAAAAATATTAGGTCAAATCTTCCCTTGGGTCAAGCCCACTAAATCTAACAAAAACCCACATTTGTATATTCAAAGTTCAGATGCTTGGGCTTTGTACTTGCCTCGAGTGGATAAGCCATTTGAGTCTCCCATCATATAGTTAGAGTTTCCTATTATTATAACCCATCCTTGGCTACAATAGAACTTTTTTTAAAAAAAAAAACTCTTCATTGTTTACCGTATTTAGTATTTTTCATAATCATCGTCTCTTGTTTTGTAATGCAGACTAAAATCATTTGCACTCAAAACACATATATAATAACCGACTTAATATCCCAAACAGCCCTAAATGTTTTTTCAGTACACTTCAGCACACCATAAGATATAAGACTTTGAATCATCGACCTCAACAGAAAGAGTACATATCATTATCGTTGGTCTATGTTGGCCAATGGCCGGTAACTTAGCAAGCGCTATAAGCAGCTATTTGTATAATAAGCAGGTAGGTACTACACATTGGTAGTTGGGGCAAACGACAGAAGGTGGAGAAGGTATCGCGATATGCTTAAAGTGGTTGCTGATTCTTTCAGGGTGTTGGATATCTGAGCTGTTTATGAAGGGTGTAAATCTCACCCAGTTTCTCTATTTAAAATTTTCCCTCTTCATTTAATATCTATTGGAAATTATTGTATATAGTTTGGTAATATATCAATGTCCTTGTAAGATAATATAAACATTTGTTATAAAGAGCTACAAAAGTACCCAAGTTCTATTCGACTTCCCATAGGTGTAATATATTATGTTTATTAG

mRNA sequence

GTAAGGAAGAAAGAAAAGAAACAACAGCAGAAAGAGTGTGGAATATGACCACAAAAACCCAACCCAATTAGATATACCATTCTCGGCTTCCATTTTCCAATTTTCCATTTTATGAGAGCTTCTCTTTATCAGATATGGCCGTTTCAACCTCTTGCCTGAGTTGGGTTCCCACCACTGCATCCAATTGGAAGCTGAAGTTGCTTCCTTTCAATGAGCCTACAACAGCTACTTCTTCATTTTCTTCCTCTAGTACCATCAATTGCTCAATTGAGAGAACTTCTCGTGATGAAGGCATTTACAATAGAAGGCCGCTTTTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTGGGTGCGAGTCCCCTCTTTGCTCAAGAAGTCCCAAAGAATTATCGAGCATTTGTAGACTATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTTCGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGACATCCATGAAGAAGGGCCATTAGATGAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGTTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATTCTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTACACATTGGTAGTTGGGGCAAACGACAGAAGGTGGAGAAGGTATCGCGATATGCTTAAAGTGGTTGCTGATTCTTTCAGGGTGTTGGATATCTGAGCTGTTTATGAAGGGTGTAAATCTCACCCAGTTTCTCTATTTAAAATTTTCCCTCTTCATTTAATATCTATTGGAAATTATTGTATATAGTTTGGTAATATATCAATGTCCTTGTAAGATAATATAAACATTTGTTATAAAGAGCTACAAAAGTACCCAAGTTCTATTCGACTTCCCATAGGTGTAATATATTATGTTTATTAG

Coding sequence (CDS)

ATGGCCGTTTCAACCTCTTGCCTGAGTTGGGTTCCCACCACTGCATCCAATTGGAAGCTGAAGTTGCTTCCTTTCAATGAGCCTACAACAGCTACTTCTTCATTTTCTTCCTCTAGTACCATCAATTGCTCAATTGAGAGAACTTCTCGTGATGAAGGCATTTACAATAGAAGGCCGCTTTTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTGGGTGCGAGTCCCCTCTTTGCTCAAGAAGTCCCAAAGAATTATCGAGCATTTGTAGACTATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTTCGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGACATCCATGAAGAAGGGCCATTAGATGAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGTTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATTCTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTACACATTGGTAGTTGGGGCAAACGACAGAAGGTGGAGAAGGTATCGCGATATGCTTAAAGTGGTTGCTGATTCTTTCAGGGTGTTGGATATCTGA

Protein sequence

MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPLLLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

Homology

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BLAST of MELO3C025467.jh1 vs. NCBI nr
Match: XP_008463496.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 475 bits (1222), Expect = 5.40e-169
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. NCBI nr
Match: XP_008463498.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 468 bits (1204), Expect = 2.89e-166
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFAQ VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAQ-VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of MELO3C025467.jh1 vs. NCBI nr
Match: XP_004149826.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucumis sativus] >KGN51268.1 hypothetical protein Csa_009408 [Cucumis sativus])

HSP 1 Score: 458 bits (1178), Expect = 2.76e-162
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFA+E+PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGK YYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKIYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. NCBI nr
Match: XP_038889544.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 444 bits (1142), Expect = 8.49e-157
Identity = 220/236 (93.22%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSC SWVPTTASNWKL+LLPFNEP+TATSSFSS STINCS E+TSR+EG  NRRPL
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLL ASPLFA+EVPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. NCBI nr
Match: XP_038889545.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 438 bits (1127), Expect = 1.58e-154
Identity = 220/236 (93.22%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSC SWVPTTASNWKL+LLPFNEP+TATSSFSS STINCS E+TSR+EG  NRRPL
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLL ASPLFA EVPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLAASPLFA-EVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 9.0e-69
Identity = 134/236 (56.78%), Postives = 168/236 (71.19%), Query Frame = 0


Query: 2   AVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEG-IYNRRPL 61
           ++S  C  + PT +   K ++L  N    A    SS    + S     +  G  + RR  
Sbjct: 5   SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQA 64

Query: 62  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 121
           L+GVG L  + + A+ L A+E+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 65  LVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRY 124

Query: 122 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 181
           LQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKER  DGKNYYT
Sbjct: 125 LQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYT 184

Query: 182 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
           FEY L +  ++ T+FAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 185 FEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-33
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0


Query: 34  SFSSSSTINCSIERTSRDEGIYNRRPLLLGVGALATSLLGASPL-FAQEVPKNYRAFVDY 93
           S SSSS +    +R         R  +  GV A   SLL  +PL FA E  K + A  D 
Sbjct: 37  SSSSSSHLQDKCQR---------RLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDN 96

Query: 94  TDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLV 153
            D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E GP  ++   L+
Sbjct: 97  KDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLI 156

Query: 154 KHRYAAPNQKVTIYDMKERTIDGKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGA 213
           K   A PNQK T+ D  E  +DGK YY FE+ + +R ++R A  TI + NG +YTL  GA
Sbjct: 157 KKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGA 216

Query: 214 NDRRWRRYRDMLKVVADSFRV 234
           N+RRW + +D L  V DSF++
Sbjct: 217 NERRWEKMKDRLHTVVDSFKI 228

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CKZ3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)

HSP 1 Score: 475 bits (1222), Expect = 2.61e-169
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CJF3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)

HSP 1 Score: 468 bits (1204), Expect = 1.40e-166
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFAQ VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAQ-VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KNR7 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505780 PE=4 SV=1)

HSP 1 Score: 458 bits (1178), Expect = 1.34e-162
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFA+E+PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGK YYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKIYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GN93 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)

HSP 1 Score: 426 bits (1096), Expect = 4.22e-150
Identity = 211/236 (89.41%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPT+ASNWK +LLPFNEP+TAT S+SS +TI CS ERTSR E   NRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALA SL  ASPLFA+EVPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALAASLFAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRA+SRT+FATIA+ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JS28 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 6.00e-150
Identity = 210/236 (88.98%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPT+ASNWK +LLPFNEP+TAT S+SS +T+ CS ERTSR E   NRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSL  A PLFA+EVPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLFAARPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRA+SRT+FATIA+ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of MELO3C025467.jh1 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-70
Identity = 122/182 (67.03%), Postives = 148/182 (81.32%), Query Frame = 0


Query: 55  YNRRPLLLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDS 114
           + RR  L+GVG L  + + A+ L A+E+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDS
Sbjct: 49  WKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 108

Query: 115 AFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTID 174
           AFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKER  D
Sbjct: 109 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 168

Query: 175 GKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVL 234
           GKNYYTFEY L +  ++ T+FAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L
Sbjct: 169 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 228

Query: 235 DI 237
            I
Sbjct: 229 QI 230

[Close]

BLAST of MELO3C025467.jh1 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 261.5 bits (667), Expect = 6.4e-70
Identity = 134/236 (56.78%), Postives = 168/236 (71.19%), Query Frame = 0


Query: 2   AVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEG-IYNRRPL 61
           ++S  C  + PT +   K ++L  N    A    SS    + S     +  G  + RR  
Sbjct: 5   SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQA 64

Query: 62  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 121
           L+GVG L  + + A+ L A+E+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 65  LVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRY 124

Query: 122 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 181
           LQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKER  DGKNYYT
Sbjct: 125 LQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYT 184

Query: 182 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 237
           FEY L +  ++ T+FAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 185 FEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of MELO3C025467.jh1 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 55  YNRRPLLLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDS 114
           + RR  L+GVG L  + + A+ L A+E+PK+Y  FVD  DGYSYYYPSDWREFDFRAHDS
Sbjct: 49  WKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 108

Query: 115 AFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKE 171
           AFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKE
Sbjct: 109 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

[Close]

BLAST of MELO3C025467.jh1 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0


Query: 34  SFSSSSTINCSIERTSRDEGIYNRRPLLLGVGALATSLLGASPL-FAQEVPKNYRAFVDY 93
           S SSSS +    +R         R  +  GV A   SLL  +PL FA E  K + A  D 
Sbjct: 37  SSSSSSHLQDKCQR---------RLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDN 96

Query: 94  TDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLV 153
            D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E GP  ++   L+
Sbjct: 97  KDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLI 156

Query: 154 KHRYAAPNQKVTIYDMKERTIDGKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGA 213
           K   A PNQK T+ D  E  +DGK YY FE+ + +R ++R A  TI + NG +YTL  GA
Sbjct: 157 KKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGA 216

Query: 214 NDRRWRRYRDMLKVVADSFRV 234
           N+RRW + +D L  V DSF++
Sbjct: 217 NERRWEKMKDRLHTVVDSFKI 228

[Close]

BLAST of MELO3C025467.jh1 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 45.1 bits (105), Expect = 9.4e-05
Identity = 53/249 (21.29%), Postives = 98/249 (39.36%), Query Frame = 0


Query: 23  LPFNEPTTATSSFSSSST--------INCSIERTSRDEGIYNRRPLLLG--VGALATSLL 82
           L F+ P ++   + S+ +        INC +    +   +  R+ +++G  +  L  S  
Sbjct: 39  LLFSRPISSGPKYQSAKSAKPESPVAINC-LTDAKQVCAVGRRKSMMMGLLMSGLIVSQA 98

Query: 83  GASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIP 142
                FA      +R ++D  DGYS+ YP +W +      D  F+D  +  +N+ V+F  
Sbjct: 99  NLPTAFAS--TPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSS 158

Query: 143 TEKKD---IHEEGPLDEVVNFLVKH--------RYAAPNQKVTIYDMKERTIDGKNYYTF 202
               +   + + G  +EV   +++         R     Q   +        DGK YY  
Sbjct: 159 PSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQV 218

Query: 203 EYKLSSRA-----------------FSRTAFATIAIANGRYYTLVVGANDRRWRRYRDML 234
           E  + S A                 ++R   A + + N R Y++ +   ++ +      L
Sbjct: 219 EVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDL 278

The following BLAST results are available for this feature:

BLAST of MELO3C025467.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463496.1	5.40e-169	100.00	PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isofo...	[more]
XP_008463498.1	2.89e-166	99.58	PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isofo...	[more]
XP_004149826.1	2.76e-162	96.19	photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucumis sativus...	[more]
XP_038889544.1	8.49e-157	93.22	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Beni...	[more]
XP_038889545.1	1.58e-154	93.22	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Beni...	[more]

BLAST of MELO3C025467.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80634	9.0e-69	56.78	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
P82538	2.7e-33	39.30	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]

BLAST of MELO3C025467.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CKZ3	2.61e-169	100.00	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A1S3CJF3	1.40e-166	99.58	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]
A0A0A0KNR7	1.34e-162	96.19	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505780 PE=4 S...	[more]
A0A6J1GN93	4.22e-150	89.41	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A6J1JS28	6.00e-150	88.98	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]

BLAST of MELO3C025467.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39470.2	2.9e-70	67.03	PsbP-like protein 2	[more]
AT2G39470.1	6.4e-70	56.78	PsbP-like protein 2	[more]
AT2G39470.3	1.2e-44	71.55	PsbP-like protein 2	[more]
AT3G55330.1	1.9e-34	39.30	PsbP-like protein 1	[more]
AT4G15510.1	9.4e-05	21.29	Photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 85..233 e-value: 4.3E-39 score: 134.1
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 73..233 e-value: 2.4E-37 score: 130.5
None	No IPR available	PANTHER	PTHR31407:SF10	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 1, CHLOROPLASTIC	coord: 1..236
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 1..236
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 87..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025467.jh1.t1	MELO3C025467.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding