Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTACTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCTAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGTAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACAAGCATGGTCACGGGCGTGGTTGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCTACAGCAACAAGAGAATGCAGCAGTACCCGGGCAATCGGATGGGCAACAACAACAAGAGAATCAGGAGGAAATACAA
mRNA sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTACTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCTAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGTAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACAAGCATGGTCACGGGCGTGGTTGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAA
Coding sequence (CDS)
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTACTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCTAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGTAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACAAGCATGGTCACGGGCGTGGTTGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAA
Protein sequence
MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMLTFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHNEYLYYEVPAAVPEQSDEQQQQENQEEIQ
Homology
BLAST of MELO3C025033 vs. NCBI nr
Match:
KAA0034013.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 143/163 (87.73%), Postives = 143/163 (87.73%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMM
Sbjct: 591 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMP 650
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNSE GQSSTDFGQQYYDLGSDPSSSY HGHGRG GEHN
Sbjct: 651 TFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHN 710
Query: 121 EYLYYEVPAAVPE---------------QSDEQQQQENQEEIQ 149
EYLYYEVPAAVPE QSDEQQQQENQEEIQ
Sbjct: 711 EYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQ 753
BLAST of MELO3C025033 vs. NCBI nr
Match:
KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 271.9 bits (694), Expect = 3.2e-69
Identity = 142/163 (87.12%), Postives = 143/163 (87.73%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+SEHNYVSPVMMM
Sbjct: 599 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMP 658
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNSE GQSSTDFGQQYYDLGSDPSSSY HGHGRG GEHN
Sbjct: 659 TFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHN 718
Query: 121 EYLYYEVPAAVPEQSDE---------------QQQQENQEEIQ 149
EYLYYEVPAAVPEQSDE QQQQENQEEIQ
Sbjct: 719 EYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQ 761
BLAST of MELO3C025033 vs. NCBI nr
Match:
KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 270.4 bits (690), Expect = 9.2e-69
Identity = 142/163 (87.12%), Postives = 142/163 (87.12%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMM
Sbjct: 442 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMP 501
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDS VGQSSDFGRGYYNSE GQSSTDFGQQYYDLGSDPSSSY HGHGRG GEHN
Sbjct: 502 TFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHN 561
Query: 121 EYLYYEVPAAVPE---------------QSDEQQQQENQEEIQ 149
EYLYYEVPAAVPE QSDEQQQQENQEEIQ
Sbjct: 562 EYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQ 604
BLAST of MELO3C025033 vs. NCBI nr
Match:
KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQSEHNYVSPVMMM
Sbjct: 329 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYVSPVMMMP 388
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNS+ GQSSTDFGQQYYDLGSDPSSSY HGHGRG G+HN
Sbjct: 389 TFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGKHN 448
Query: 121 EYLYYEVPAAVPEQSDEQQQQEN 144
EYLYYEVPAAVPEQSDE QQQEN
Sbjct: 449 EYLYYEVPAAVPEQSDELQQQEN 471
BLAST of MELO3C025033 vs. NCBI nr
Match:
TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQSEHNYVSPVMMM
Sbjct: 1090 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYVSPVMMMP 1149
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNS+ GQSSTDFGQQYYDLGSDPSSSY HGHGRG G+HN
Sbjct: 1150 TFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGKHN 1209
Query: 121 EYLYYEVPAAVPEQSDEQQQQEN 144
EYLYYEVPAAVPEQSDE QQQEN
Sbjct: 1210 EYLYYEVPAAVPEQSDELQQQEN 1232
BLAST of MELO3C025033 vs. ExPASy TrEMBL
Match:
A0A5A7SU33 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00810 PE=4 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 5.3e-70
Identity = 143/163 (87.73%), Postives = 143/163 (87.73%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMM
Sbjct: 591 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMP 650
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNSE GQSSTDFGQQYYDLGSDPSSSY HGHGRG GEHN
Sbjct: 651 TFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHN 710
Query: 121 EYLYYEVPAAVPE---------------QSDEQQQQENQEEIQ 149
EYLYYEVPAAVPE QSDEQQQQENQEEIQ
Sbjct: 711 EYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQ 753
BLAST of MELO3C025033 vs. ExPASy TrEMBL
Match:
A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 142/163 (87.12%), Postives = 143/163 (87.73%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHGEEVPPMTQT+SEHNYVSPVMMM
Sbjct: 599 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMP 658
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNSE GQSSTDFGQQYYDLGSDPSSSY HGHGRG GEHN
Sbjct: 659 TFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHN 718
Query: 121 EYLYYEVPAAVPEQSDE---------------QQQQENQEEIQ 149
EYLYYEVPAAVPEQSDE QQQQENQEEIQ
Sbjct: 719 EYLYYEVPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQ 761
BLAST of MELO3C025033 vs. ExPASy TrEMBL
Match:
A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 4.5e-69
Identity = 142/163 (87.12%), Postives = 142/163 (87.12%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMM
Sbjct: 442 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMP 501
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDS VGQSSDFGRGYYNSE GQSSTDFGQQYYDLGSDPSSSY HGHGRG GEHN
Sbjct: 502 TFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHN 561
Query: 121 EYLYYEVPAAVPE---------------QSDEQQQQENQEEIQ 149
EYLYYEVPAAVPE QSDEQQQQENQEEIQ
Sbjct: 562 EYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQ 604
BLAST of MELO3C025033 vs. ExPASy TrEMBL
Match:
A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)
HSP 1 Score: 269.6 bits (688), Expect = 7.6e-69
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQSEHNYVSPVMMM
Sbjct: 1090 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYVSPVMMMP 1149
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNS+ GQSSTDFGQQYYDLGSDPSSSY HGHGRG G+HN
Sbjct: 1150 TFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGKHN 1209
Query: 121 EYLYYEVPAAVPEQSDEQQQQEN 144
EYLYYEVPAAVPEQSDE QQQEN
Sbjct: 1210 EYLYYEVPAAVPEQSDELQQQEN 1232
BLAST of MELO3C025033 vs. ExPASy TrEMBL
Match:
A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)
HSP 1 Score: 269.6 bits (688), Expect = 7.6e-69
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
Query: 1 MENIHYMYDVPIVPTPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMML 60
MENIHYMYDVPIVP PVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQSEHNYVSPVMMM
Sbjct: 329 MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYVSPVMMMP 388
Query: 61 TFGTTYYDSGVGQSSDFGRGYYNSEVGQSSTDFGQQYYDLGSDPSSSYKHGHGRGCGEHN 120
TFGTTYYDSGVGQSSDFGRGYYNS+ GQSSTDFGQQYYDLGSDPSSSY HGHGRG G+HN
Sbjct: 389 TFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGKHN 448
Query: 121 EYLYYEVPAAVPEQSDEQQQQEN 144
EYLYYEVPAAVPEQSDE QQQEN
Sbjct: 449 EYLYYEVPAAVPEQSDELQQQEN 471
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0034013.1 | 1.1e-69 | 87.73 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0055624.1 | 3.2e-69 | 87.12 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0067080.1 | 9.2e-69 | 87.12 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| KAA0036767.1 | 1.6e-68 | 93.71 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| TYJ95836.1 | 1.6e-68 | 93.71 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SU33 | 5.3e-70 | 87.73 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7UKC7 | 1.5e-69 | 87.12 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7VIP6 | 4.5e-69 | 87.12 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| A0A5D3BAB0 | 7.6e-69 | 93.71 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7T598 | 7.6e-69 | 93.71 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
