MELO3C024968.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GAACAACGCAAACACCAAAAATCGAGGAGTTCACTACCAATGTCAAAATTTGCTTACATTTCTCAAACATTTCCTTTCTCCCATATCAACAATATTTTTCCCTTCAAACCACAAAAACCCAACACCAACAATCCCCAAATTTCACAAACCCTAACTATTCCATCTTTCTTCTAACTAAAATCTGATTCAATCCCCCATGGATAACAAAGCAGATCGCAAAGCTCCTAGGCCCAACGATAGAAACATTCCCAATCACAATCACAATCACAATCACCATCACAATCACCATCACTATCACAGAATGGCAATCACAGAGTTGAATTTAGCAGATCTTAAGCACAATAATCATCACCTCCTCGTCTCTCCCTCGCCACCCTCCACCGCCACCAAGACTCCCTCCTCTGCTAAAGCCAACTGTCTCTGTTCTCCAACCACTCACATTGGCTCCTTCCGTTGCCGGCACCACCGGCATGCTGGAATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAACCTACCGAAATAATGGGACCTTTTTCGCCTTGACTTGCCTTTTTCCTTCTTTTCTGGAGGCGGCTTTGTTTTGTTTATTTGTTCCTTTGTGTTCCTGCTTCCTCTTCCAGTTGGTGATGCAAAAATGTGGGGAATGAATGGGGGATTT GAACAACGCAAACACCAAAAATCGAGGAGTTCACTACCAATGTCAAAATTTGCTTACATTTCTCAAACATTTCCTTTCTCCCATATCAACAATATTTTTCCCTTCAAACCACAAAAACCCAACACCAACAATCCCCAAATTTCACAAACCCTAACTATTCCATCTTTCTTCTAACTAAAATCTGATTCAATCCCCCATGGATAACAAAGCAGATCGCAAAGCTCCTAGGCCCAACGATAGAAACATTCCCAATCACAATCACAATCACAATCACCATCACAATCACCATCACTATCACAGAATGGCAATCACAGAGTTGAATTTAGCAGATCTTAAGCACAATAATCATCACCTCCTCGTCTCTCCCTCGCCACCCTCCACCGCCACCAAGACTCCCTCCTCTGCTAAAGCCAACTGTCTCTGTTCTCCAACCACTCACATTGGCTCCTTCCGTTGCCGGCACCACCGGCATGCTGGAATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAACCTACCGAAATAATGGGACCTTTTTCGCCTTGACTTGCCTTTTTCCTTCTTTTCTGGAGGCGGCTTTGTTTTGTTTATTTGTTCCTTTGTGTTCCTGCTTCCTCTTCCAGTTGGTGATGCAAAAATGTGGGGAATGAATGGGGGATTT ATGGATAACAAAGCAGATCGCAAAGCTCCTAGGCCCAACGATAGAAACATTCCCAATCACAATCACAATCACAATCACCATCACAATCACCATCACTATCACAGAATGGCAATCACAGAGTTGAATTTAGCAGATCTTAAGCACAATAATCATCACCTCCTCGTCTCTCCCTCGCCACCCTCCACCGCCACCAAGACTCCCTCCTCTGCTAAAGCCAACTGTCTCTGTTCTCCAACCACTCACATTGGCTCCTTCCGTTGCCGGCACCACCGGCATGCTGGAATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAACCTACCGAAATAATGGGACCTTTTTCGCCTTGA MDNKADRKAPRPNDRNIPNHNHNHNHHHNHHHYHRMAITELNLADLKHNNHHLLVSPSPPSTATKTPSSAKANCLCSPTTHIGSFRCRHHRHAGMIRGGSVGSNLSDLARKPTEIMGPFSP Homology
BLAST of MELO3C024968.jh1 vs. NCBI nr
Match: KGN44385.1 (hypothetical protein Csa_015645 [Cucumis sativus]) HSP 1 Score: 184 bits (466), Expect = 1.48e-57 Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. NCBI nr
Match: KAA0048240.1 (putative PGPS/D10 protein [Cucumis melo var. makuwa] >TYK07880.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]) HSP 1 Score: 180 bits (457), Expect = 1.33e-56 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. NCBI nr
Match: KAG7024984.1 (hypothetical protein SDJN02_13804, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 127 bits (318), Expect = 3.88e-35 Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. NCBI nr
Match: KAG6607735.1 (hypothetical protein SDJN03_01077, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037310.1 hypothetical protein SDJN02_00935, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 105 bits (263), Expect = 8.59e-27 Identity = 62/118 (52.54%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. NCBI nr
Match: KAF4362350.1 (hypothetical protein F8388_008234 [Cannabis sativa]) HSP 1 Score: 101 bits (252), Expect = 3.48e-25 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K3W3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278200 PE=4 SV=1) HSP 1 Score: 184 bits (466), Expect = 7.18e-58 Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TYF3 (Putative PGPS/D10 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70465G00010 PE=4 SV=1) HSP 1 Score: 180 bits (457), Expect = 6.42e-57 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. ExPASy TrEMBL
Match: A0A7J6EXD7 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_008234 PE=4 SV=1) HSP 1 Score: 101 bits (252), Expect = 1.68e-25 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. ExPASy TrEMBL
Match: A0A7J6H8T3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_016661 PE=4 SV=1) HSP 1 Score: 101 bits (252), Expect = 2.58e-25 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CNY2 (uncharacterized protein LOC111013367 OS=Momordica charantia OX=3673 GN=LOC111013367 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.51e-23 Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related ) HSP 1 Score: 60.8 bits (146), Expect = 8.4e-10 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of MELO3C024968.jh1 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related ) HSP 1 Score: 57.4 bits (137), Expect = 9.3e-09 Identity = 31/52 (59.62%), Postives = 34/52 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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