MELO3C024511.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGTAATAATTTCCAAAAATACTCTATATCGATGAATACATCGAATGAAAAAGAATAGAGAAGCTAAACAGACCGACTCCTAACGAGGATCATTGGGAAACCCAACGCTTTATTAGAGAAGTTCAAAAGTCGTCTCGAAAATTTCAGATCCATATATATATATATAAACAAAGATCCTCATTCGGATATAAAATCAAACGACATCACTGAAAATGGCAGAATCATCAACCAACAAAAACAAAGCTCGTGCAAGCAAATACAGCAGCGACGAAGAAGAAGAAAATCGAAATATTGACTTGGGGTTGTCAATGAAAAGTTTGAGTCTTGGCCCAAAAAAGAAGCTTTTGATCATGGGAATCGGTGGATTTCTTTGTCATAGAGTCTGTTATCGTTACCGCAGAGAAACGATCCCAAAACATCGTCATCCTGATGCATCCTATGGCAGTTTCTATGGTCTCACCATTCTCCTTTTAATTTTCTTCTCAATGATTTATCATATTATTATTATTATCTTCATTTTTTTACTTATTTTTTCTTCTTTTTTTTTTTTTTATATAAAATCGGAATTTATTTTCTTTCCTTTTACTATCCTATCTTAGGTTGCATCTGTTTTAATAAGAGCTACTTTTTTAATCAAATCTTAAATATTTAATACGATGTGTTGCTAAATCTCTATCCATTCTCACACTATGCACAAATTACATTTCTTATTTCTAATTTAGTTGTCCATATCTCTATGCTAGTTTACAAGCGACCATTCTGTGAGGACTTCATGAAGTTCTGCTTAGAGAGGTTTGAAGTTGGTATATGGTCTTCAGCAAAAGAGTTAGTGATTCTCAAATTAATTTTGACAAAACCGTATTATATTTGCAACTAATTATTATTTTGACAATTTTGTTTTCTAACAAGTTTGTATTATTTTCAAACGTGTGCATGTGTGTATATATATGTATATAGATGGTACTTGGACAGTGCTTTGGATTCTATAATGCATGGATTGAGACGCAAACTTCTATTTGCATGGGTAAGCAATATATTTAGTACCCAAATTCTGCAATGAATTATATTGTTAGCCTTATTAAAAATTGGTGTCTAATTCAATTTTATTATTTTTTGTTTGTTGTGGTTTTTTATAGGACCAAGGAAAGTGTACTAAGACCTGTTTTTTTGACTTGGAGAAGAAGTTCAAACCCATTTTTCTCAAGGAATTGAAGAAAGTATGGGAAGGCAATGGAGTTGGAATTTCGAGGCCTTCAACACAATTTTGTTCATCCAATACACTCTTAATTGACAATGAGCCTTACAAAGTTTTGTTGAATCCGGTCAGTATTCAACTGCTAACTTTGTCATTTGTTTCTTTTTTTTTTTTTTTAATAAAAAAAGTACTTAGATTAGGTATAGCCTCAGTGATTGCTATTTCTATTTTTTTCTAACCTAACATCTTTGCCTTGGGATTCCTTTGGATCCCTAAGATTTTTATGTTTTTGACTTTGTATGAATTATATATGCAGCCTCACACTGCTATATTCCCAAAGGAGTACAAGGCAGATGATATTGACGACGATGCTTTAGGAGCTGGAAGTGAACTAAGACGTTTCCTTGAAAAAGTTGCCGAGGCCAAAGATGTTCCTAATTTCATCAAACACAATCCATTTGGAAACCCACCCATTTCTCCATATCATCCGAATTGGGATTATTATTCCAAAATCATTTCAACATATGAGAAATAGTTAATTTCTACC AAAAGTAATAATTTCCAAAAATACTCTATATCGATGAATACATCGAATGAAAAAGAATAGAGAAGCTAAACAGACCGACTCCTAACGAGGATCATTGGGAAACCCAACGCTTTATTAGAGAAGTTCAAAAGTCGTCTCGAAAATTTCAGATCCATATATATATATATAAACAAAGATCCTCATTCGGATATAAAATCAAACGACATCACTGAAAATGGCAGAATCATCAACCAACAAAAACAAAGCTCGTGCAAGCAAATACAGCAGCGACGAAGAAGAAGAAAATCGAAATATTGACTTGGGGTTGTCAATGAAAAGTTTGAGTCTTGGCCCAAAAAAGAAGCTTTTGATCATGGGAATCGGTGGATTTCTTTGTCATAGAGTCTGTTATCGTTACCGCAGAGAAACGATCCCAAAACATCGTCATCCTGATGCATCCTATGGCAGTTTCTATGTTGTCCATATCTCTATGCTAGTTTACAAGCGACCATTCTGTGAGGACTTCATGAAGTTCTGCTTAGAGAGATGGTACTTGGACAGTGCTTTGGATTCTATAATGCATGGATTGAGACGCAAACTTCTATTTGCATGGGACCAAGGAAAGTGTACTAAGACCTGTTTTTTTGACTTGGAGAAGAAGTTCAAACCCATTTTTCTCAAGGAATTGAAGAAAGTATGGGAAGGCAATGGAGTTGGAATTTCGAGGCCTTCAACACAATTTTGTTCATCCAATACACTCTTAATTGACAATGAGCCTTACAAAGTTTTGTTGAATCCGCCTCACACTGCTATATTCCCAAAGGAGTACAAGGCAGATGATATTGACGACGATGCTTTAGGAGCTGGAAGTGAACTAAGACGTTTCCTTGAAAAAGTTGCCGAGGCCAAAGATGTTCCTAATTTCATCAAACACAATCCATTTGGAAACCCACCCATTTCTCCATATCATCCGAATTGGGATTATTATTCCAAAATCATTTCAACATATGAGAAATAGTTAATTTCTACC ATGGCAGAATCATCAACCAACAAAAACAAAGCTCGTGCAAGCAAATACAGCAGCGACGAAGAAGAAGAAAATCGAAATATTGACTTGGGGTTGTCAATGAAAAGTTTGAGTCTTGGCCCAAAAAAGAAGCTTTTGATCATGGGAATCGGTGGATTTCTTTGTCATAGAGTCTGTTATCGTTACCGCAGAGAAACGATCCCAAAACATCGTCATCCTGATGCATCCTATGGCAGTTTCTATGTTGTCCATATCTCTATGCTAGTTTACAAGCGACCATTCTGTGAGGACTTCATGAAGTTCTGCTTAGAGAGATGGTACTTGGACAGTGCTTTGGATTCTATAATGCATGGATTGAGACGCAAACTTCTATTTGCATGGGACCAAGGAAAGTGTACTAAGACCTGTTTTTTTGACTTGGAGAAGAAGTTCAAACCCATTTTTCTCAAGGAATTGAAGAAAGTATGGGAAGGCAATGGAGTTGGAATTTCGAGGCCTTCAACACAATTTTGTTCATCCAATACACTCTTAATTGACAATGAGCCTTACAAAGTTTTGTTGAATCCGCCTCACACTGCTATATTCCCAAAGGAGTACAAGGCAGATGATATTGACGACGATGCTTTAGGAGCTGGAAGTGAACTAAGACGTTTCCTTGAAAAAGTTGCCGAGGCCAAAGATGTTCCTAATTTCATCAAACACAATCCATTTGGAAACCCACCCATTTCTCCATATCATCCGAATTGGGATTATTATTCCAAAATCATTTCAACATATGAGAAATAG MAESSTNKNKARASKYSSDEEEENRNIDLGLSMKSLSLGPKKKLLIMGIGGFLCHRVCYRYRRETIPKHRHPDASYGSFYVVHISMLVYKRPFCEDFMKFCLERWYLDSALDSIMHGLRRKLLFAWDQGKCTKTCFFDLEKKFKPIFLKELKKVWEGNGVGISRPSTQFCSSNTLLIDNEPYKVLLNPPHTAIFPKEYKADDIDDDALGAGSELRRFLEKVAEAKDVPNFIKHNPFGNPPISPYHPNWDYYSKIISTYEK Homology
BLAST of MELO3C024511.jh1 vs. NCBI nr
Match: TYK07373.1 (Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 507 bits (1305), Expect = 7.36e-181 Identity = 248/266 (93.23%), Postives = 250/266 (93.98%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. NCBI nr
Match: KAA0025295.1 (Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 502 bits (1293), Expect = 7.43e-179 Identity = 248/277 (89.53%), Postives = 250/277 (90.25%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. NCBI nr
Match: XP_004143298.2 (uncharacterized protein LOC101207591 [Cucumis sativus]) HSP 1 Score: 444 bits (1142), Expect = 6.14e-156 Identity = 221/271 (81.55%), Postives = 236/271 (87.08%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. NCBI nr
Match: KAE8647415.1 (hypothetical protein Csa_003399 [Cucumis sativus]) HSP 1 Score: 444 bits (1141), Expect = 1.11e-154 Identity = 221/270 (81.85%), Postives = 235/270 (87.04%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. NCBI nr
Match: XP_022143931.1 (uncharacterized protein LOC111013724 [Momordica charantia]) HSP 1 Score: 324 bits (831), Expect = 1.15e-108 Identity = 169/274 (61.68%), Postives = 202/274 (73.72%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C640 (Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00930 PE=4 SV=1) HSP 1 Score: 507 bits (1305), Expect = 3.56e-181 Identity = 248/266 (93.23%), Postives = 250/266 (93.98%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SLF5 (Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001490 PE=4 SV=1) HSP 1 Score: 502 bits (1293), Expect = 3.60e-179 Identity = 248/277 (89.53%), Postives = 250/277 (90.25%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHD9 (FCP1 homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449850 PE=4 SV=1) HSP 1 Score: 444 bits (1142), Expect = 2.97e-156 Identity = 221/271 (81.55%), Postives = 236/271 (87.08%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CRS6 (uncharacterized protein LOC111013724 OS=Momordica charantia OX=3673 GN=LOC111013724 PE=4 SV=1) HSP 1 Score: 324 bits (831), Expect = 5.59e-109 Identity = 169/274 (61.68%), Postives = 202/274 (73.72%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E3T4 (uncharacterized protein LOC103500865 OS=Cucumis melo OX=3656 GN=LOC103500865 PE=4 SV=1) HSP 1 Score: 314 bits (804), Expect = 1.37e-106 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. TAIR 10
Match: AT4G26190.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 159.8 bits (403), Expect = 2.9e-39 Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. TAIR 10
Match: AT2G36540.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 156.0 bits (393), Expect = 4.1e-38 Identity = 101/263 (38.40%), Postives = 143/263 (54.37%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. TAIR 10
Match: AT2G36550.1 (CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits to 91 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 102.4 bits (254), Expect = 5.4e-22 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of MELO3C024511.jh1 vs. TAIR 10
Match: AT3G29760.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 90.1 bits (222), Expect = 2.8e-18 Identity = 49/168 (29.17%), Postives = 83/168 (49.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|