MELO3C024336.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTTTTCGTTGGACTTTTATTCTGCCAAAAATAATAAAAGAATTTCTTCTTTTTGAAGCTCCAAAAAAACGTGCTTAAACTCCTTATTTTTTTTATTGCTAACTAATACTTTTTTCAAACAGAGAGAGAGGAAGAGAGGAAGAGAGGAAGAGAGAGAGAGATACCAATTCCTTTACCAGCTGGAGATGTGAAGAAACTTGACCAGTTATATTCTCCGTCTTCTCCATTTCCGCCGTTTCTCTTCACCGGATAACGGCGATTCTTTCTCTCGCCGCCTGAACCTTTGTTACTCGCTTCAGCAACTACCGGTAGATTTTAAGCCTTTTGGTTCCTTCTTTTTCTTCTTGGTTTCTTTTTTTTTTTGTTGTTGTTGTTGGTCAATATGTCGAATACATCGGACGCGGGCGGAGGGGGGAGACTTTCCGACCGACAGCAGCTGGCGAAGCGGCTGGAGAAATCGAATTTTGCTCAGACCTGTAACCTGTTGAGCCAGTTCTTGAAAGAGAAACGAACTCTCGTTGATTTGAGCTCCGATATGGCTCCCAGGAAGAAGGCGAGAGGTACTATTCATTTGGTTGAATTTACTCTGTTTTTCTTAAGAATTTTGAAAATACCTTGGAATTTTTAGATCTTACTCGAGATTTTCCTTATCATTTTTCGGGATACGATCTAGATGAACTCGAGAAGCCCAAGCCGCCGCCGCCGCCACCGTCGTTGCCTCTACCGCCTTCGACCACGAATACGGACAATTCTTCCGACGCTTCACGGCAGCAGAAGGATGGTCTGCCGAAGTTCGTTGGATTTCCTTCGTCGGGATTCTCCAATAACGCCATCAATAAGAGCGAGTTTAGGTGCTCTAATATTCCCCCAACTTTTAGGGCTAATTTTTCTTTTAATCGAGTACGAATCTTGAATTTACTTGCTCACTGCTGTTGCTCATGAGACAATTTCGAAAATAAAGAAGAAAATTAGGTTAGATTACATCACTATAAAATGGAGTTCTAATTTCTGTTCGTTTTCCCGCCGATTCTTTTAGGAAACCAGCCACGCCGGAGCCTACAACCGCTCAAATGACCATTTTCTACGCCGGAAAAGTTTTGGTGTATGATGATTTTCCCAACGAGAGGGCCAAGGAGATCATGGCCTTAGCCGATAAAGGAAGCCGCGGCTCCACCACCACCGCCGCCGCTCCTCCAGCTGCCGTCGCCCCCAACAGATTCTTTTCTGCTTTGGAAAAGCCTAACAGCAATTCTCCCACCGGCGAGCCAAATGTGGTGTCCAAAACTCCGGCTCCGGTGAAGCCGGCTCCGGAGCAGCAACTGAAACCGCAAACGGAAGTAAAAAAGTCATCTGGTAATTAACCGCCATGATTGTAGAAATTTCAAAGATGGGTTCTATTTGATTATCTTGATTTGGTGCTCTTAATTGGATTTAATTTTGCCCTCTTTTTTTCCTTCTTTGATCGAGCAGATTTGCCTATCGCTAGGAGGGCTTCCCTTCACCGATTTCTTGAGAAGAGAAAAGACAGGTATGTTGTTCTTTGTTCTTTGTTTTTTTTCTTTTTTCCTCAGCCCTCTTTATTCATTGGAGTTGATGAGATCCCTCTGGTTATCATTTTGTCTACTTGCTTCTCTAAAATTGTTATTCAGATCCTGATTTTGTTTTTTCTTCTTTTTTAGCTAAAATAGCGTTGGTCGGTTTATAAATCATGATAAAACTTTACTAATTCTTATCATTTCATAATGTATATGATCGTCCTGATTCGTAGATCTAAGTTACATGAACACGAATCCCTCGAACTTGTCGGTCCTGATTTTGTTTTTAAAAATAACTCATTCTTTCCAAAGTTTTTGTATTGCCGATCTATGTCTTTTATCAACGTTTCCATTTACCATATTGATTTTTTAAAAAACAAATGGGAAAGTTGAATGTTGAATGGTGCTTCTTATAATCATGTGAATCACACCCGATTTATTTAAAAATTGGATCCTCCAAAATCTATTTTTTTTTTTATACATCTTTGTGGAGCCATGTATGTGTTAAACTCTCCTTTTCTTTTCTTCTTTTTTTGTGTACCTACCAAATTATCCTATTGTTTTATTTGATTGTTATTTATGTTAGAATTTTTAATTTATTTTTTAAAAATGAATTTGACCCAAAATTCTGATCGGTAGCTAGGTAGAAATGGAAAAAGGATGGTGAAAATCTTACCTAATTCAGATAACATAGAAGAAGAAGAAGAAAAAACGGCAAATTCAGTCTATAAGATATGATTTTAGCCATTTAAACATGCTGTAAAGAAAAATATTGTAAAAGTTTAAGTATGAATTTGTAGATGTTTGTCTTGTTACAGAAATGATTCACTCTATAGGTTGAAAATATATAGTAATTGCTTCTAAAAATAGTGGTTCCCAAACAATGGAAGTGAAGTTTAAATGTCAAGTAACTGTCAAAATTGGAAAAGTACTTTTCAAACAAAATTTAAGGTGTTGGAAACAAATATTATTGCCATATGACCTTGAAAATTATTACAAGATTCATAGTTTTTTCTTTTTCTTGCTCAAGTAGTTGTTGAAATTTTTATATGGATTGAACTATACTCCATTTAGTAGCTACAAGGTTAATAGTTAAGTTTGTTTTTTGATTTGATTAAAACTTCAACCAATGTTATGCTCTTTTAGTTAGTTTACAAGTCTTAAGCTTTATCTGAAATCATTTTAAAACTAGGAAAGTTGAAGGTTGTACTTATAATTATAATTGAATTCATAAAGACAAATGTTTTTATTATTGTCATATTTTTTATCATGAGGTTGAGCAGTGTTGTTTATGATTAGGGCTGTAATAAGAGCACCGTACCAAGTGAACCAACAGCCAGAGCCTGCTTCTAAAGCAAGTGGAAGCAGCTCAGCCAATGAGCCGGAGTCCGTGCCCATGCCCGTGCCCGAGCTCGTGCCAGAAGCGGAAGCTGAAGAAGGCTTTCCACGACATCTCGATCTCAACTTATGACATGGTTTTGCTCTACCATAGGTTAATTATTTCCCTCTCCAAATTTGGTTGCTATTTTGTGTCATATATTACAACTTAGTCCATTAATCTCCCACTCTTTCCAACAATTATGCCTTCCTAACAAATATTATCCCAAGTCATAATATGTATTTTTTTTACCTCTCTATAGAAATTTTCGATGCAATATATGGAAGAATAGTTAACCTTGTGCTTAGGTTATATAAATCATTCAAGTTGTTATGTTTACGACTTATTCTTTTCGATGGTAACAGATTGATATTCGAGATATTTTGTTTAAACAAGCAGACAAAATCACGTAGAATCAAATTCTTGTCAAATTATTCTTAATGC TTCTTTTTCGTTGGACTTTTATTCTGCCAAAAATAATAAAAGAATTTCTTCTTTTTGAAGCTCCAAAAAAACGTGCTTAAACTCCTTATTTTTTTTATTGCTAACTAATACTTTTTTCAAACAGAGAGAGAGGAAGAGAGGAAGAGAGGAAGAGAGAGAGAGATACCAATTCCTTTACCAGCTGGAGATGTGAAGAAACTTGACCAGTTATATTCTCCGTCTTCTCCATTTCCGCCGTTTCTCTTCACCGGATAACGGCGATTCTTTCTCTCGCCGCCTGAACCTTTGTTACTCGCTTCAGCAACTACCGGTAGATTTTAAGCCTTTTGGTTCCTTCTTTTTCTTCTTGGTTTCTTTTTTTTTTTGTTGTTGTTGTTGGTCAATATGTCGAATACATCGGACGCGGGCGGAGGGGGGAGACTTTCCGACCGACAGCAGCTGGCGAAGCGGCTGGAGAAATCGAATTTTGCTCAGACCTGTAACCTGTTGAGCCAGTTCTTGAAAGAGAAACGAACTCTCGTTGATTTGAGCTCCGATATGGCTCCCAGGAAGAAGGCGAGAGATCTTACTCGAGATTTTCCTTATCATTTTTCGGGATACGATCTAGATGAACTCGAGAAGCCCAAGCCGCCGCCGCCGCCACCGTCGTTGCCTCTACCGCCTTCGACCACGAATACGGACAATTCTTCCGACGCTTCACGGCAGCAGAAGGATGGTCTGCCGAAGTTCGTTGGATTTCCTTCGTCGGGATTCTCCAATAACGCCATCAATAAGAGCGAGTTTAGGAAACCAGCCACGCCGGAGCCTACAACCGCTCAAATGACCATTTTCTACGCCGGAAAAGTTTTGGTGTATGATGATTTTCCCAACGAGAGGGCCAAGGAGATCATGGCCTTAGCCGATAAAGGAAGCCGCGGCTCCACCACCACCGCCGCCGCTCCTCCAGCTGCCGTCGCCCCCAACAGATTCTTTTCTGCTTTGGAAAAGCCTAACAGCAATTCTCCCACCGGCGAGCCAAATGTGGTGTCCAAAACTCCGGCTCCGGTGAAGCCGGCTCCGGAGCAGCAACTGAAACCGCAAACGGAAGTAAAAAAGTCATCTGATTTGCCTATCGCTAGGAGGGCTTCCCTTCACCGATTTCTTGAGAAGAGAAAAGACAGGGCTGTAATAAGAGCACCGTACCAAGTGAACCAACAGCCAGAGCCTGCTTCTAAAGCAAGTGGAAGCAGCTCAGCCAATGAGCCGGAGTCCGTGCCCATGCCCGTGCCCGAGCTCGTGCCAGAAGCGGAAGCTGAAGAAGGCTTTCCACGACATCTCGATCTCAACTTATGACATGGTTTTGCTCTACCATAGGTTAATTATTTCCCTCTCCAAATTTGGTTGCTATTTTGTGTCATATATTACAACTTAGTCCATTAATCTCCCACTCTTTCCAACAATTATGCCTTCCTAACAAATATTATCCCAAGTCATAATATGTATTTTTTTTACCTCTCTATAGAAATTTTCGATGCAATATATGGAAGAATAGTTAACCTTGTGCTTAGGTTATATAAATCATTCAAGTTGTTATGTTTACGACTTATTCTTTTCGATGGTAACAGATTGATATTCGAGATATTTTGTTTAAACAAGCAGACAAAATCACGTAGAATCAAATTCTTGTCAAATTATTCTTAATGC ATGTCGAATACATCGGACGCGGGCGGAGGGGGGAGACTTTCCGACCGACAGCAGCTGGCGAAGCGGCTGGAGAAATCGAATTTTGCTCAGACCTGTAACCTGTTGAGCCAGTTCTTGAAAGAGAAACGAACTCTCGTTGATTTGAGCTCCGATATGGCTCCCAGGAAGAAGGCGAGAGATCTTACTCGAGATTTTCCTTATCATTTTTCGGGATACGATCTAGATGAACTCGAGAAGCCCAAGCCGCCGCCGCCGCCACCGTCGTTGCCTCTACCGCCTTCGACCACGAATACGGACAATTCTTCCGACGCTTCACGGCAGCAGAAGGATGGTCTGCCGAAGTTCGTTGGATTTCCTTCGTCGGGATTCTCCAATAACGCCATCAATAAGAGCGAGTTTAGGAAACCAGCCACGCCGGAGCCTACAACCGCTCAAATGACCATTTTCTACGCCGGAAAAGTTTTGGTGTATGATGATTTTCCCAACGAGAGGGCCAAGGAGATCATGGCCTTAGCCGATAAAGGAAGCCGCGGCTCCACCACCACCGCCGCCGCTCCTCCAGCTGCCGTCGCCCCCAACAGATTCTTTTCTGCTTTGGAAAAGCCTAACAGCAATTCTCCCACCGGCGAGCCAAATGTGGTGTCCAAAACTCCGGCTCCGGTGAAGCCGGCTCCGGAGCAGCAACTGAAACCGCAAACGGAAGTAAAAAAGTCATCTGATTTGCCTATCGCTAGGAGGGCTTCCCTTCACCGATTTCTTGAGAAGAGAAAAGACAGGGCTGTAATAAGAGCACCGTACCAAGTGAACCAACAGCCAGAGCCTGCTTCTAAAGCAAGTGGAAGCAGCTCAGCCAATGAGCCGGAGTCCGTGCCCATGCCCGTGCCCGAGCTCGTGCCAGAAGCGGAAGCTGAAGAAGGCTTTCCACGACATCTCGATCTCAACTTATGA MSNTSDAGGGGRLSDRQQLAKRLEKSNFAQTCNLLSQFLKEKRTLVDLSSDMAPRKKARDLTRDFPYHFSGYDLDELEKPKPPPPPPSLPLPPSTTNTDNSSDASRQQKDGLPKFVGFPSSGFSNNAINKSEFRKPATPEPTTAQMTIFYAGKVLVYDDFPNERAKEIMALADKGSRGSTTTAAAPPAAVAPNRFFSALEKPNSNSPTGEPNVVSKTPAPVKPAPEQQLKPQTEVKKSSDLPIARRASLHRFLEKRKDRAVIRAPYQVNQQPEPASKASGSSSANEPESVPMPVPELVPEAEAEEGFPRHLDLNL Homology
BLAST of MELO3C024336.jh1 vs. NCBI nr
Match: XP_008462277.1 (PREDICTED: protein TIFY 10B-like [Cucumis melo]) HSP 1 Score: 568 bits (1463), Expect = 1.38e-203 Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. NCBI nr
Match: XP_004141716.1 (protein TIFY 10B [Cucumis sativus] >KGN45470.1 hypothetical protein Csa_015576 [Cucumis sativus]) HSP 1 Score: 512 bits (1318), Expect = 1.43e-181 Identity = 275/300 (91.67%), Postives = 280/300 (93.33%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. NCBI nr
Match: XP_038899482.1 (protein TIFY 10B-like [Benincasa hispida]) HSP 1 Score: 452 bits (1162), Expect = 7.12e-158 Identity = 252/306 (82.35%), Postives = 262/306 (85.62%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. NCBI nr
Match: KAA0059383.1 (protein TIFY 10B-like [Cucumis melo var. makuwa]) HSP 1 Score: 427 bits (1097), Expect = 5.40e-149 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. NCBI nr
Match: XP_022992349.1 (protein TIFY 10B-like [Cucurbita maxima]) HSP 1 Score: 410 bits (1053), Expect = 2.23e-141 Identity = 232/300 (77.33%), Postives = 244/300 (81.33%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy Swiss-Prot
Match: Q9S7M2 (Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22 Identity = 89/246 (36.18%), Postives = 126/246 (51.22%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy Swiss-Prot
Match: Q9LMA8 (Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.0e-21 Identity = 81/233 (34.76%), Postives = 121/233 (51.93%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy Swiss-Prot
Match: Q8H395 (Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20 Identity = 92/254 (36.22%), Postives = 124/254 (48.82%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy Swiss-Prot
Match: A2YNP2 (Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19 Identity = 91/254 (35.83%), Postives = 123/254 (48.43%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy Swiss-Prot
Match: Q9LDU5 (Protein TIFY 11A OS=Arabidopsis thaliana OX=3702 GN=TIFY11A PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.1e-18 Identity = 84/242 (34.71%), Postives = 125/242 (51.65%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CI37 (protein TIFY 10B-like OS=Cucumis melo OX=3656 GN=LOC103500674 PE=3 SV=1) HSP 1 Score: 568 bits (1463), Expect = 6.69e-204 Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K6X7 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448810 PE=3 SV=1) HSP 1 Score: 512 bits (1318), Expect = 6.95e-182 Identity = 275/300 (91.67%), Postives = 280/300 (93.33%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UTY1 (Protein TIFY 10B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001090 PE=3 SV=1) HSP 1 Score: 427 bits (1097), Expect = 2.61e-149 Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JXA8 (protein TIFY 10B-like OS=Cucurbita maxima OX=3661 GN=LOC111488686 PE=3 SV=1) HSP 1 Score: 410 bits (1053), Expect = 1.08e-141 Identity = 232/300 (77.33%), Postives = 244/300 (81.33%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GSV3 (protein TIFY 10B-like OS=Cucurbita moschata OX=3662 GN=LOC111456641 PE=3 SV=1) HSP 1 Score: 410 bits (1053), Expect = 1.20e-141 Identity = 230/300 (76.67%), Postives = 243/300 (81.00%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. TAIR 10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein ) HSP 1 Score: 108.6 bits (270), Expect = 8.8e-24 Identity = 89/246 (36.18%), Postives = 126/246 (51.22%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. TAIR 10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 103.6 bits (257), Expect = 2.8e-22 Identity = 81/233 (34.76%), Postives = 121/233 (51.93%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. TAIR 10
Match: AT1G17380.1 (jasmonate-zim-domain protein 5 ) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19 Identity = 84/242 (34.71%), Postives = 125/242 (51.65%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. TAIR 10
Match: AT1G19180.2 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-17 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0
BLAST of MELO3C024336.jh1 vs. TAIR 10
Match: AT1G72450.1 (jasmonate-zim-domain protein 6 ) HSP 1 Score: 83.6 bits (205), Expect = 3.0e-16 Identity = 92/282 (32.62%), Postives = 139/282 (49.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|