MELO3C023845 (gene) Melon (DHL92) v4

Overview
NameMELO3C023845
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Locationchr10: 6202685 .. 6207953 (-)
RNA-Seq ExpressionMELO3C023845
SyntenyMELO3C023845
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTCTTCGAGAGTTCCCAAAAATCAGATCAAAGGAAGAGTCTTTCTACGCATTTTCTCCTCTTCATTCTCTTACCTTCAGGTAATTATGAACTTACGATACCTGGATTCACTATTTCGTTTATAGATGTTTATCTAGATTATTCTTGGTCGAACCCTAAACCCATAGTTGTTTACCGCTACTTTCTTTGTTTCGATCATTCCGAATTAGCTGTTTCCCTTCACTCTTAGTTTGAATCATCTCTTTGCGTTTCTTTAGGTAGAATTGGGAAAAGAATAGGTGATAAGAGGACCCTTTTTGTCGAACCCTCTTGATTCCCTTTTAATATATATATGGATGTATCTTGTGTGGGTTTATAATCTTCAACATTTTTAACATTTATCGTAGCAGGCAATTGAGAGTTTCAGTGAGACCTGAGCCTATGAAGTGTAGCTTAGGGTTTTAACAGTCAGAACCCCTTTTCAGTTTAGGATCATAAGTGGGTGTCATTGGATTAACTACTATTCTATTTAGGTAATAATTAGTTTGAATTGGTAGGAAGTTGACAATATGCATCTTAATTGCTGACCTCACCTGATCATTGTTGTGGACAGGTTGAAACATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGTCAGGATTTCACCACTTTTTTTCAGCTACCTTATTGCTTTGTCCAATTTAGGTTTCAGTACTAACTACTACTTTTCTAATTAATGAATTTATTGTTTTCTTTCACTGCATTTAAAGAACTTGACTTTTGGTTGTAATGGTACATTTAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGGTGAGCATCTTGTGTTTATTTTTCTTATTTGTTATTCATTCCACTCAATCCATGGTATGTGTTGGATTTATCGAGCTGTTATTCTACCTGATTTGCGAACGTGTACTTCTACTTTCCTTGTACTTTCCTTGTGAGTTAGTTTGGTAATGAAACATCATTAAGATTTGATCAAATGAACCTCATGCAGGGTTCGGGTGGTAATTTTAGGTTTACTTGTTAAGCATTACGCCAAGCCTTTTGAGTTAGAACTTGTTACTTTCTCTTGTTTGATGCTCTCAGTCGTGTGCTAAGCTTCATATATAGGTCAATCATGATCATATTCATAATATATAGAGCACATTTAAAGCTTTTCTAATTTGCATTTCAAGATTCTATTGTCAGAAAAATGCCTGATTTTCTTTTTCTTCTTTCTGGAAAGAACTCTCAAGTGCCTACATACGCAAGATGAAATAAACTCTTAAGCAACTGTTGGGGGACTCTTTTACAACTACCTTTTAACTTGATCAATTCTTGAGGGTGTAATATGTGCACTGAACTGAGTTCTAATTTTTTTAGACAATTTTTTTAGATTATATGGAACATCCAGTTGAGTTTGTTATTCATAGTCAGGGAATGAAGAGGATGAACAATGTCAAATGAAATTTCACCGGACCTTATTTTTTCTGGATGGATCTTATTCCCATTTCATAGTGTGTTTTGAACTGCTTTGTCAGGGGGCATATTGGTTAGAACTTTGAAGTTAAAACAAGCCCAAGCCCCTTTTAATGAGGGTCTACTACCTTCCACCGCCTAACATATAGCTCATCAAGAATGTAAAGAATAATATCGAAATGAGGGTGTCTCTCTCTGAGGAGACATTAGATAACCACACCCATCAATAGAAGTTGATAAGGAAGAGGGTTGATTCTTGAGCAATTGAAGCCAACAAGTTGAAGGTTTCATAGTTGTGGAATCTTTGTTCAAGTGCTTCATTTCCAAGCGTTTGAAGAATAGTCACAAATTTTTGGTTTCAAGTAATTATATCAAGAAATGTGAAGTTTATGAGGAGGAAGGTATATTCTTGAGCAATTGAAGCCAACAAGGTGAAGGTTTTAAGGTTGTGGAATGTTTGTTCAAGTGCTTCATGTGTTCCAAGTGTGTGAAGAATTTTCAACTCATGAATTGTTGGTTTACTTATATCAAGAAATATGAAGATTTGTCAAGTCAAGTTACGTTGAATTGAAGTGCTTATAGTTACAAGAATATGAAGATTTTTCAAGTCACTTGCCTCTTTCATGCTTGATTGTAAAGATAAGGTTAGCTACTAAACTTTGAAATTCGCTGTGCTTTATGTAACTCCAGCCCCAGCTTTGATGAAAGCAGTCTGAAGTTAATGCTGGATATGAAAAGAAAGCTATTTAGTTTACGACATCCCAAATCCTTTTAGCCATGAAAATGTATATTAATGTAGTCATTCACCCTTATTACCCAAGATTTGTATCCAGAATGGGTTTCTTATTTTTATCTCTGTTTTTTTTCCTTAAATCTTTTGTAGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGTAGTTTGTTTATTCTCATTTTCCTCTTTTTCTCAATGGTTTCAGGGAACAGCAAATTTAGTATTCGCCCCCTTGCATCTACTTTCAAGTTTGAGTTGCATGGTTGTTTGCTTGAGCCTTAAAGAAATATACTTATTATTGTTCATCTGGTAAAAAGTCTCAGTTCTTTTCTGTATTGTAACCAAGCTGCAAGCATCTATATCTTATATAATGTTTATTTAGTGGGGTGGGGTGGATCAAAAGCAATCTAAAACTCTCAGTTCTTTCCATTCTCTGTATATAGTGGCTAACAGCCTTTTATTAGTTGCAAGTTACATGTTTTTTACTATTCCCTTTTTCCACTTTGCAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGTATGGGTACAATCAGTCTCTCTTCAAATTTTACTAACCTTATCTTTAAATAGCTTTTTTAGTTAAGTGAAAACCCCAACATAAAAAAGTGAGAAGTCCTCTTATATTCTAATTCTCAATTTCTAGTTCATGGTACTTAAGTTTTTTAACTGTTCAAGAAGTCTAGCATTATGTATGGTTCTTCCCTCACAATGTTACCTGCAAAGTTTAGTAAAGAGCACATCACAACAATTTCAAGGGCAATGACACCGTTCTATTAGCAGGAATAAGGAAAAGGTTGAAAACACCAGTTAGCTAGAAGTAGCACATATCAGAAACAGAAAGATAGTTAACCAAGAGAGTTGCCCCACCCCACCAAAACCCCGCATAATCAACCTGCCCTTCACAAATAAACCTGGCACACCTCACTAACCCACAAACTAACAGCCAGTGTTCGAATTTCCTGATTTACTTCTAGAATATGTCTTCTTGTGTGTGTGTGTGTGGGTGGGTGGGTGGGGGGCTCACAGATTACTACTTGTTATGGAACTGTTGGACATTACAGCTTGAAGCAGTAGCATATGGGAATTATTTCTAAGATGCACGTGTATTCTTATTTGACTTTTCTTGAGACCTAAGATTGTTGTATTTATTTGCAAGCTCTCAGTTAAATGGTTTTATATATCATTTAGATGGACTCTTTATTTTATTTTTTGTGCAATGATCTTAGTAGTTTCACATGCAGACAGATGAATTATGGTATTTAAATTGTCCTTTTACTAGAATCATTCTTTCCTTATTTGGTCCTCGGCTCTGAACCTTTTTTTCAACATGCAACTTCTTTTATTAGGTTCAAATATAAACATATAATAATTCCTTTTGGGTTTATTGGGTTCCTTAAGTGAGTGTGTGTGTCTCAACTTAGCATAACGTCAACTCCTTTGTTATGAAATTTTGAGTGTGCAGTTTAATTGCTAAAATTAAAAACGAACCTCTTCTGTAGTCTGTGCATTTATTGTTTGTGGTATTGTAGGCTTCAATTTCTTACTAAATTTCAAGTGCACATACTTCAGCTTCTTCTAAAAAAATTACACATTCATGCTCGGAATCAAACCAATCCTTAATTATTGTACTGGACAAAATATGGCCATTTTGGATTTTTGTATTCAATGATCAAACCTGGTTTCAGGCAGTAGTTGTTCATTTGATTTGATTTTTTTTTTGTTGGGGTTCATATAGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTAATCTTCTATTTAAAACACCTGGTTCACATTTATTAATGCTCCAGATAGTTGTAAATATGCCATAAGAGAAATTGTCAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGATTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGAGTAAGTTGTATGATTTACTGATGAATTTTGAGTACCTGCCTGACTGTGTGGTTCCTTTCATGTTCTTGTTGGCAAAATGACATTTTCCCATAATTTCAGCCATTTTGCAATTTTGACTTCATTGCTTTTCTGGCAGCACCTTGAACATGAGACTATTTTTGGTGTTTTTCATTTTTTTTAAATCATATACTTCATCATATTTGTTTACTGTGCTCATTTAGAAATATGTTCTATTCGGTTTTATTTATACGTCGATCCATTTTCGCTTCTTTTAGCAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTCTAATATAAAACATTTGTTATTATCCACTATCCAGGAGAAGTTTTTAGATTGTATTTTGTAAGATGTTCTTGGGCGTGTTGGGATTTTCTAGACCGGGGAATCTTATTTGCTCTCATTTGAAGTTTAAAAAATATTATGCTACTTTTCTGGATACCAATGCTATCTGTTTCTCT

mRNA sequence

AGTCTTCGAGAGTTCCCAAAAATCAGATCAAAGGAAGAGTCTTTCTACGCATTTTCTCCTCTTCATTCTCTTACCTTCAGGTTGAAACATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGATTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGACAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGATTTTTCTTTGAGAAAATATGACAGTAGATGATGTAAACCATCTTTTCTAATATAAAACATTTGTTATTATCCACTATCCAGGAGAAGTTTTTAGATTGTATTTTGTAAGATGTTCTTGGGCGTGTTGGGATTTTCTAGACCGGGGAATCTTATTTGCTCTCATTTGAAGTTTAAAAAATATTATGCTACTTTTCTGGATACCAATGCTATCTGTTTCTCT

Coding sequence (CDS)

ATGAGAAGATACAGTCCACCATACCATAGTCCACCAAGAAGAGGGTATGGTGGTCGTGGAAGAAGCCCCCCGGGTAGGGGTTATGGTGGTGGCGGTGGCGGTGGCGGTGGGTATGGAAGGCGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCGGAGGAGCTTAGAGCGCCGTTTGAGAGGTTTGGACTTGTTCGTGATGTGTATATTCCAAAGGACTATTACACAGGTGAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAAAAATTTGCTGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCGAGGAAGAGGCCAGAACAGATGCGCCAAAGAAGTAGAAGGGGACCATCTGGCTACGGTGGACGCCGTTCTCATTATGGACGTTCAAGATCTCGTTCAGTATCCAGATCACGCTCCCCTCGCCATCCTTCGGGTTCAAGAAGTAGATACCGATCAAGGTCTTACTCTCCAGCTCCGAGGTGGCGAGGCGACTATTCTGTTTCCCCTGGTAGAAGGCACGCAGATTACCCTGAATCACCTAGAGGTGCTCCTCGTGAGCGAGATGTTGAGAGGAGCCGACAAGTATATTCTCCTGGTTATGATAATGCTGATGAGCACGATCAGAATGGAAATGGATATCATGACAAGTCTGGATTTGAAGGGGAGGATGCACGAGGTAATTGGAGGTCGTCTCCTGGTAGAACATCAAGATCCCCATCGGGGTCCCGATCCCGCTCTGCTGATGCGTCCCCCAGACACGGTAGATGA

Protein sequence

MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Homology
BLAST of MELO3C023845 vs. NCBI nr
Match: XP_008461655.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461656.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461657.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240

Query: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280

BLAST of MELO3C023845 vs. NCBI nr
Match: XP_038892248.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispida])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 270/283 (95.41%), Postives = 274/283 (96.82%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRS+SRSRSPRHPSGSRSRYRS
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSISRSRSPRHPSGSRSRYRS 180

Query: 181 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNG 240
           RSYSPAPRWRGDYSVSP RRHADYPESPRG PRERD ER+RQVYSPGYDNAD+H+ NGNG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPESPRG-PRERDAERNRQVYSPGYDNADDHNHNGNG 240

Query: 241 YHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           YHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 YHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGR 282

BLAST of MELO3C023845 vs. NCBI nr
Match: XP_038892246.1 (serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida] >XP_038892247.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispida])

HSP 1 Score: 514.6 bits (1324), Expect = 5.3e-142
Identity = 270/286 (94.41%), Postives = 274/286 (95.80%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY---GRSRSRSVSRSRSPRHPSGSRSR 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHY   GRSRSRS+SRSRSPRHPSGSRSR
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGSMGRSRSRSISRSRSPRHPSGSRSR 180

Query: 181 YRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQN 240
           YRSRSYSPAPRWRGDYSVSP RRHADYPESPRG PRERD ER+RQVYSPGYDNAD+H+ N
Sbjct: 181 YRSRSYSPAPRWRGDYSVSPSRRHADYPESPRG-PRERDAERNRQVYSPGYDNADDHNHN 240

Query: 241 GNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           GNGYHDKS FEGEDAR NWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 GNGYHDKSAFEGEDARANWRSSPGRTSRSPSGSRSRSADASPRHGR 285

BLAST of MELO3C023845 vs. NCBI nr
Match: XP_022139086.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia])

HSP 1 Score: 501.5 bits (1290), Expect = 4.7e-138
Identity = 262/286 (91.61%), Postives = 266/286 (93.01%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSP RRHADYP SPRGAP ERD ERS+Q YSPGYDNAD HD +GNGYHD
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDHDGNGYHD 240

Query: 241 KSGFEGEDARGNW------RSSPGRTSRSPSGSRSRSADASPRHGR 281
           KS FEG D R NW      RSSPGR SRSPSGSRSRSADASPRHGR
Sbjct: 241 KSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHGR 286

BLAST of MELO3C023845 vs. NCBI nr
Match: XP_031741884.1 (LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 6.1e-138
Identity = 267/285 (93.68%), Postives = 269/285 (94.39%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGY---GRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPG GYGGGGGGGGG      RREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGXGYGGGGGGGGGVVVGMERREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180

Query: 181 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNG 240
           RSYSPAPRWRGDYSVSPGRRH DYPESPRGAPRERDVERSRQVYSPGYDNADEH QNGNG
Sbjct: 181 RSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGNG 240

Query: 241 YHDKS-GFEGED-ARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           YHDKS   E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 YHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSRSRSADASPRHGR 285

BLAST of MELO3C023845 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 6.2e-77
Identity = 183/287 (63.76%), Postives = 205/287 (71.43%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPM 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR   HGSLLVRNIP+
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGG----RRGSSHGSLLVRNIPL 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGR
Sbjct: 61  DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRY 180
           EITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRY
Sbjct: 121 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRY 180

Query: 181 RSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDN----ADEH 240
           RSRSYSPAPR RG                PRG   E D   SR+ YSPGY+     A + 
Sbjct: 181 RSRSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDR 240

Query: 241 DQNG-NGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           D+NG N   +K G+E ED R   R+     SRSPSGSRSRS + SPR
Sbjct: 241 DRNGDNEIREKPGYEAEDRRRGGRA----VSRSPSGSRSRSVEVSPR 262

BLAST of MELO3C023845 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 126/276 (45.65%), Postives = 154/276 (55.80%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS    
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS---- 183

Query: 182 PAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                 GDY   P RRH     SPR    ER   R     SP  D +    ++      K
Sbjct: 184 ------GDYYSPPPRRHHPRSISPR---EERYDGRRSYSRSPASDGS--RGRSLTPVRGK 242

Query: 242 SGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           S       R +   SP R SRSPS  R+RS   SPR
Sbjct: 244 SRSLSPSPRRSISRSP-RRSRSPSPKRNRS--VSPR 242

BLAST of MELO3C023845 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31
Identity = 116/282 (41.13%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS--------RDSDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV
Sbjct: 64  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+
Sbjct: 124 FAEENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYN 183

Query: 182 PAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                       P +RH    +S   +P++R  E+ R      Y  +  H    NG   +
Sbjct: 184 S----------PPAKRH----QSRSVSPQDRRYEKER-----SYSRSPPH----NGSRVR 243

Query: 242 SGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           SG  G     +R   RS   R +RS +  ++RS    PR  R
Sbjct: 244 SGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSR 244

BLAST of MELO3C023845 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.5e-22
Identity = 91/228 (39.91%), Postives = 116/228 (50.88%), Query Frame = 0

Query: 2   RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIP 61
           R YS  P   SPP  R+GY        P  R +   G  G             LL+RN+P
Sbjct: 9   RSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSG-------------LLIRNLP 68

Query: 62  MDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAG 121
           +D RP +LR  FERFG ++D+Y+P++YYTGEPRGF FV++    +A+EA   MN K   G
Sbjct: 69  LDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGG 128

Query: 122 REITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRY 181
           REI +V A E+RK P++MR       +G  GR   Y R+  RS  R    R+ S SRSR 
Sbjct: 129 REIAIVFAEENRKTPQEMRT-----TNGTSGRHGDYKRTSHRSPRR----RYRSHSRSRS 188

Query: 182 RSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSP 224
             R  S   + R D   SP RR      SP   PR     +SR   SP
Sbjct: 189 PPRRESRHSKVREDDLYSPRRRSRSISRSP--LPRNEREYKSRNCRSP 212

BLAST of MELO3C023845 vs. ExPASy Swiss-Prot
Match: Q9BRL6 (Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-19
Identity = 93/238 (39.08%), Postives = 119/238 (50.00%), Query Frame = 0

Query: 48  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 107
           +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  
Sbjct: 15  TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74

Query: 108 MNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GYGGRRSHYGR----SRSRSVS 167
           M+G +  GRE+ V +A   R+   + RQ   RG S   GYG R   YGR     R R  S
Sbjct: 75  MDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRS 134

Query: 168 RSRSPR-HPSGSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQ 227
           RSR P    S SRSRYR   YS +P  R  YS       + Y  SP    R R+      
Sbjct: 135 RSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS------RSRYSRSPYSRSRYRESRYGGS 194

Query: 228 VY-SPGYDNADEHDQNGNGYHDKSGFE-GEDARGNWRSSPGRTSRSPSGSRSRSADAS 276
            Y S GY N+     + +  H KSG      +    +SS  R S+S S SRSRS   S
Sbjct: 195 HYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRS 246

BLAST of MELO3C023845 vs. ExPASy TrEMBL
Match: A0A1S3CFP8 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=LOC103500205 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.1e-152
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240

Query: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 KSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 280

BLAST of MELO3C023845 vs. ExPASy TrEMBL
Match: A0A0A0KNV5 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.2e-141
Identity = 271/286 (94.76%), Postives = 273/286 (95.45%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGGGGGYGRRREQPHGSLLVRNIPM 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGGGGGYGRRREQPHGSLLVRNIPM
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPM 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR
Sbjct: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR 180
           EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR
Sbjct: 121 EITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYR 180

Query: 181 SRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGN 240
           SRSYSPAPRWRGDYSVSPGRRH DYPESPRGAPRERDVERSRQVYSPGYDNADEH QNGN
Sbjct: 181 SRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDNADEHGQNGN 240

Query: 241 GYHDKS-GFEGED-ARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           GYHDKS   E +D  R NWR+SPGRTSRSPSGSRSRSADASPRHGR
Sbjct: 241 GYHDKSPSVEHQDHLRVNWRASPGRTSRSPSGSRSRSADASPRHGR 286

BLAST of MELO3C023845 vs. ExPASy TrEMBL
Match: A0A6J1CBL6 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3673 GN=LOC111010084 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.3e-138
Identity = 262/286 (91.61%), Postives = 266/286 (93.01%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHD 240
           SPAPRWRGDYSVSP RRHADYP SPRGAP ERD ERS+Q YSPGYDNAD HD +GNGYHD
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDHDGNGYHD 240

Query: 241 KSGFEGEDARGNW------RSSPGRTSRSPSGSRSRSADASPRHGR 281
           KS FEG D R NW      RSSPGR SRSPSGSRSRSADASPRHGR
Sbjct: 241 KSAFEGGDVRANWRSSPGRRSSPGRISRSPSGSRSRSADASPRHGR 286

BLAST of MELO3C023845 vs. ExPASy TrEMBL
Match: A0A6J1JIZ1 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661 GN=LOC111485002 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.5e-137
Identity = 263/285 (92.28%), Postives = 267/285 (93.68%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQPHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQPHGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRS 180
           I VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 181 RSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNG 240
           RSYSPAPRWRGDYSVSP RRHADYP SPRGA RERD ERSRQVYSPGYDNAD  + D NG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNG 240

Query: 241 NGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           NGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR 285

BLAST of MELO3C023845 vs. ExPASy TrEMBL
Match: A0A6J1H0N2 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111458935 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.7e-136
Identity = 260/282 (92.20%), Postives = 265/282 (93.97%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQPHGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI V
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY 180

Query: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNGNGY 240
           SPAPRWRGDYSVSP RRHADYP SPRGA RERD ER+RQVYSPGYDNAD  + D NGNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGY 240

Query: 241 HDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           HDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Sbjct: 241 HDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR 280

BLAST of MELO3C023845 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 )

HSP 1 Score: 288.9 bits (738), Expect = 4.4e-78
Identity = 183/287 (63.76%), Postives = 205/287 (71.43%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPM 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR   HGSLLVRNIP+
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGG----RRGSSHGSLLVRNIPL 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGR
Sbjct: 61  DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRY 180
           EITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSRY
Sbjct: 121 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRY 180

Query: 181 RSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDN----ADEH 240
           RSRSYSPAPR RG                PRG   E D   SR+ YSPGY+     A + 
Sbjct: 181 RSRSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDR 240

Query: 241 DQNG-NGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           D+NG N   +K G+E ED R   R+     SRSPSGSRSRS + SPR
Sbjct: 241 DRNGDNEIREKPGYEAEDRRRGGRA----VSRSPSGSRSRSVEVSPR 262

BLAST of MELO3C023845 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-35
Identity = 105/209 (50.24%), Postives = 129/209 (61.72%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRS-Y 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   Y
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYY 183

Query: 182 SPAPRWRGDYSVSPGRRHAD----YPESP 206
           SP PR     S+SP     D    Y  SP
Sbjct: 184 SPPPRRHHPRSISPREERYDGRRSYSRSP 193

BLAST of MELO3C023845 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 141.7 bits (356), Expect = 8.7e-34
Identity = 126/276 (45.65%), Postives = 154/276 (55.80%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS    
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS---- 183

Query: 182 PAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                 GDY   P RRH     SPR    ER   R     SP  D +    ++      K
Sbjct: 184 ------GDYYSPPPRRHHPRSISPR---EERYDGRRSYSRSPASDGS--RGRSLTPVRGK 242

Query: 242 SGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
           S       R +   SP R SRSPS  R+RS   SPR
Sbjct: 244 SRSLSPSPRRSISRSP-RRSRSPSPKRNRS--VSPR 242

BLAST of MELO3C023845 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-32
Identity = 116/282 (41.13%), Postives = 153/282 (54.26%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS--------RDSDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV
Sbjct: 64  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y+
Sbjct: 124 FAEENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYN 183

Query: 182 PAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNADEHDQNGNGYHDK 241
                       P +RH    +S   +P++R  E+ R      Y  +  H    NG   +
Sbjct: 184 S----------PPAKRH----QSRSVSPQDRRYEKER-----SYSRSPPH----NGSRVR 243

Query: 242 SGFEG---EDARGNWRSSPGRTSRSPSGSRSRSADASPRHGR 281
           SG  G     +R   RS   R +RS +  ++RS    PR  R
Sbjct: 244 SGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSR 244

BLAST of MELO3C023845 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-32
Identity = 127/288 (44.10%), Postives = 156/288 (54.17%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  G        GR R+ P  SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRYG--------GRSRDLP-TSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTG------------EPRGFAFVEFVDPYEASEAQYHMN 121
           +LR  FE+FG V+D+Y+P+DYYTG            +PRGF FV+F+DP +A++A++HM+
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMD 123

Query: 122 GKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPS 181
           G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P 
Sbjct: 124 GYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRR----RTPPRYYSRSRSP-PPR 183

Query: 182 GSRSRYRSRSYSPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNAD 241
             RSR RS          GDY   P RRH     SPR    ER   R     SP  D + 
Sbjct: 184 RGRSRSRS----------GDYYSPPPRRHHPRSISPR---EERYDGRRSYSRSPASDGS- 243

Query: 242 EHDQNGNGYHDKSGFEGEDARGNWRSSPGRTSRSPSGSRSRSADASPR 278
              ++      KS       R +   SP R SRSPS  R+RS   SPR
Sbjct: 244 -RGRSLTPVRGKSRSLSPSPRRSISRSP-RRSRSPSPKRNRS--VSPR 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008461655.11.3e-151100.00PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >... [more]
XP_038892248.11.3e-14395.41serine/arginine-rich SC35-like splicing factor SCL30 isoform X2 [Benincasa hispi... [more]
XP_038892246.15.3e-14294.41serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Benincasa hispi... [more]
XP_022139086.14.7e-13891.61serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia][more]
XP_031741884.16.1e-13893.68LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor SCL30 [Cucum... [more]
Match NameE-valueIdentityDescription
Q8L3X86.2e-7763.76Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=... [more]
Q9SEU41.2e-3245.65Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=... [more]
Q9LHP21.8e-3141.13Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX... [more]
Q1PDV27.5e-2239.91Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=... [more]
Q9BRL62.0e-1939.08Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A1S3CFP86.1e-152100.00serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=... [more]
A0A0A0KNV52.2e-14194.76RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G181460 PE=4 SV... [more]
A0A6J1CBL62.3e-13891.61serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3... [more]
A0A6J1JIZ15.5e-13792.28serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661... [more]
A0A6J1H0N24.7e-13692.20serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36... [more]
Match NameE-valueIdentityDescription
AT3G55460.14.4e-7863.76SC35-like splicing factor 30 [more]
AT1G55310.22.7e-3550.24SC35-like splicing factor 33 [more]
AT1G55310.18.7e-3445.65SC35-like splicing factor 33 [more]
AT3G13570.11.3e-3241.13SC35-like splicing factor 30A [more]
AT1G55310.33.7e-3244.10SC35-like splicing factor 33 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 48..121
e-value: 1.7E-21
score: 87.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 49..119
e-value: 1.9E-19
score: 69.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 47..125
score: 17.932785
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 39..163
e-value: 4.9E-27
score: 96.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..248
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 22..276
NoneNo IPR availablePANTHERPTHR23147:SF96OS02G0252100 PROTEINcoord: 22..276
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 43..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023845.1MELO3C023845.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding