Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACATCGGGAACAACTCCCCAAATTGCCAAAACGTATCGGCCATTCCCGATTCCAAATCACCGGAGAACGATCCTCCGTTGTTTGTCTTACAGGAAGCCATTGAATCCGTCAACGCTTCTTCTCCAATCATCCTCACCGTCGATTTCTCCAAATCCTCCTCCTCGCCTTCCCAATTGGCTTACTTCGTTCTCTATTTTACTGAAGTGCTTAATTTCACTTCCGAGGACAATAGAACCATGAATATCTTCATCGATTCAGTGTTGATGTCCACAATCACTACTAGCATTCATAAATGTACGGTGGTTACTCTGTTTCCAGTTCATGTTAAGGCGTCGACAGCCAACGTGACGCTCGCCGCAGCAAATTCATCCGTTCCCTTCCCGCCACTGATTACTGCTATGGAGGTTTTCACCAAAGTTAACGCCACAAACGTCACTGGCGACAACATCGACATCGTCGCTGGCGACAGCACACCGTCGATGCGATTTACTTTCTTGTCCTTTGTATTGATACTTTGTGTCTCTGTTTTAGCTAACTTGACGTGA
mRNA sequence
ATGTGGACATCGGGAACAACTCCCCAAATTGCCAAAACGTATCGGCCATTCCCGATTCCAAATCACCGGAGAACGATCCTCCGTTGTTTGTCTTACAGGAAGCCATTGAATCCGTCAACGCTTCTTCTCCAATCATCCTCACCGTCGATTTCTCCAAATCCTCCTCCTCGCCTTCCCAATTGGCTTACTTCGTTCTCTATTTTACTGAAGTGCTTAATTTCACTTCCGAGGACAATAGAACCATGAATATCTTCATCGATTCAGTGTTGATGTCCACAATCACTACTAGCATTCATAAATGTACGGTGGTTACTCTGTTTCCAGTTCATGTTAAGGCGTCGACAGCCAACGTGACGCTCGCCGCAGCAAATTCATCCGTTCCCTTCCCGCCACTGATTACTGCTATGGAGGTTTTCACCAAAGTTAACGCCACAAACGTCACTGGCGACAACATCGACATCGTCGCTGGCGACAGCACACCGTCGATGCGATTTACTTTCTTGTCCTTTGTATTGATACTTTGTGTCTCTGTTTTAGCTAACTTGACGTGA
Coding sequence (CDS)
GTGGACATCGGGAACAACTCCCCAAATTGCCAAAACGTATCGGCCATTCCCGATTCCAAATCACCGGAGAACGATCCTCCGTTGTTTGTCTTACAGGAAGCCATTGAATCCGTCAACGCTTCTTCTCCAATCATCCTCACCGTCGATTTCTCCAAATCCTCCTCCTCGCCTTCCCAATTGGCTTACTTCGTTCTCTATTTTACTGAAGTGCTTAATTTCACTTCCGAGGACAATAGAACCATGAATATCTTCATCGATTCAGTGTTGATGTCCACAATCACTACTAGCATTCATAAATGTACGGTGGTTACTCTGTTTCCAGTTCATGTTAAGGCGTCGACAGCCAACGTGACGCTCGCCGCAGCAAATTCATCCGTTCCCTTCCCGCCACTGATTACTGCTATGGAGGTTTTCACCAAAGTTAACGCCACAAACGTCACTGGCGACAACATCGACATCGTCGCTGGCGACAGCACACCGTCGATGCGATTTACTTTCTTGTCCTTTGTATTGATACTTTGTGTCTCTGTTTTAGCTAACTTGACGTGA
Protein sequence
VDIGNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYFVLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAANSSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT
Homology
BLAST of MELO3C023811 vs. NCBI nr
Match:
KAA0062206.1 (putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])
HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 0
Query: 4 GNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 63
G PNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF
Sbjct: 5 GTTPPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 64
Query: 64 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 123
VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN
Sbjct: 65 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 124
Query: 124 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT 183
SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT
Sbjct: 125 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT 183
BLAST of MELO3C023811 vs. NCBI nr
Match:
KGN49999.2 (hypothetical protein Csa_000485 [Cucumis sativus])
HSP 1 Score: 269.2 bits (687), Expect = 2.5e-68
Identity = 150/174 (86.21%), Postives = 160/174 (91.95%), Query Frame = 0
Query: 8 PNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYFVLYF 67
PNC NVSAIPD KSPENDPPLFVLQEAIESVNASSPIILT+DFSK SSSPSQLAYFVLYF
Sbjct: 608 PNCINVSAIPDFKSPENDPPLFVLQEAIESVNASSPIILTIDFSK-SSSPSQLAYFVLYF 667
Query: 68 TEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAANSSVP 127
TEVLNFTSE++RT+NIFIDSVLMSTITTS+HKCTVVTLFPVHVKASTANVTLAAANSSV
Sbjct: 668 TEVLNFTSENSRTINIFIDSVLMSTITTSLHKCTVVTLFPVHVKASTANVTLAAANSSVG 727
Query: 128 FPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
PPLITAMEVF KVNATNVT D+I AGD SM+F+ LSFV++LCVSVLANL
Sbjct: 728 LPPLITAMEVFAKVNATNVTDDSI---AGDGRASMQFSLLSFVMMLCVSVLANL 777
BLAST of MELO3C023811 vs. NCBI nr
Match:
XP_011656170.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51810 [Cucumis sativus])
HSP 1 Score: 269.2 bits (687), Expect = 2.5e-68
Identity = 150/174 (86.21%), Postives = 160/174 (91.95%), Query Frame = 0
Query: 8 PNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYFVLYF 67
PNC NVSAIPD KSPENDPPLFVLQEAIESVNASSPIILT+DFSK SSSPSQLAYFVLYF
Sbjct: 84 PNCINVSAIPDFKSPENDPPLFVLQEAIESVNASSPIILTIDFSK-SSSPSQLAYFVLYF 143
Query: 68 TEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAANSSVP 127
TEVLNFTSE++RT+NIFIDSVLMSTITTS+HKCTVVTLFPVHVKASTANVTLAAANSSV
Sbjct: 144 TEVLNFTSENSRTINIFIDSVLMSTITTSLHKCTVVTLFPVHVKASTANVTLAAANSSVG 203
Query: 128 FPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
PPLITAMEVF KVNATNVT D+I AGD SM+F+ LSFV++LCVSVLANL
Sbjct: 204 LPPLITAMEVFAKVNATNVTDDSI---AGDGRASMQFSLLSFVMMLCVSVLANL 253
BLAST of MELO3C023811 vs. NCBI nr
Match:
XP_038892896.1 (uncharacterized protein At1g24485-like [Benincasa hispida])
HSP 1 Score: 219.9 bits (559), Expect = 1.8e-53
Identity = 130/179 (72.63%), Postives = 141/179 (78.77%), Query Frame = 0
Query: 3 IGNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAY 62
+G PNC NVSAI D +SPENDPP F+L+EAIESVNASSPI LTVDF K SSSPSQ AY
Sbjct: 235 LGTTPPNCNNVSAIADFESPENDPPPFILEEAIESVNASSPITLTVDFPK-SSSPSQSAY 294
Query: 63 FVLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAA 122
FVLYFTEV +F +E NRT++IFI+SVLMSTITTSIHKCTVVTLFPV V AST NV LAAA
Sbjct: 295 FVLYFTEVEDFLNEKNRTIDIFINSVLMSTITTSIHKCTVVTLFPVAVNASTVNVMLAAA 354
Query: 123 NSSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
NSS FPPLI+AMEVFTKV AT PSM FTFLS VL+LCVSVLANL
Sbjct: 355 NSSAGFPPLISAMEVFTKVIATG------------GGPSMHFTFLSSVLMLCVSVLANL 400
BLAST of MELO3C023811 vs. NCBI nr
Match:
XP_011656171.1 (leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 [Cucumis sativus])
HSP 1 Score: 203.8 bits (517), Expect = 1.3e-48
Identity = 123/178 (69.10%), Postives = 137/178 (76.97%), Query Frame = 0
Query: 4 GNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 63
G PNC NV PD +SPENDPP VL+EAIESVN SSPIILTVDF KSSSS SQ AYF
Sbjct: 80 GKTPPNCNNVGVTPDFESPENDPPPSVLEEAIESVNVSSPIILTVDFPKSSSS-SQSAYF 139
Query: 64 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 123
VLYFTEV + + NRT+NIFIDSVLMSTITT++ KCTVVTLFPV V+ STA VTLAAAN
Sbjct: 140 VLYFTEVEDLFDQKNRTINIFIDSVLMSTITTTVLKCTVVTLFPVDVRGSTAKVTLAAAN 199
Query: 124 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
SS PPLI+AMEVFTKV AT VAG + PS +FTFLS +L++CVSVL NL
Sbjct: 200 SSANLPPLISAMEVFTKVIATGG-------VAGSNGPS-QFTFLSSILMICVSVLVNL 248
BLAST of MELO3C023811 vs. ExPASy TrEMBL
Match:
A0A5A7V701 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00010 PE=4 SV=1)
HSP 1 Score: 326.6 bits (836), Expect = 6.5e-86
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 0
Query: 4 GNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 63
G PNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF
Sbjct: 5 GTTPPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 64
Query: 64 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 123
VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN
Sbjct: 65 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 124
Query: 124 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT 183
SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT
Sbjct: 125 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANLT 183
BLAST of MELO3C023811 vs. ExPASy TrEMBL
Match:
A0A0A0KLJ1 (Malectin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G177640 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68
Identity = 150/174 (86.21%), Postives = 160/174 (91.95%), Query Frame = 0
Query: 8 PNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYFVLYF 67
PNC NVSAIPD KSPENDPPLFVLQEAIESVNASSPIILT+DFSK SSSPSQLAYFVLYF
Sbjct: 42 PNCINVSAIPDFKSPENDPPLFVLQEAIESVNASSPIILTIDFSK-SSSPSQLAYFVLYF 101
Query: 68 TEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAANSSVP 127
TEVLNFTSE++RT+NIFIDSVLMSTITTS+HKCTVVTLFPVHVKASTANVTLAAANSSV
Sbjct: 102 TEVLNFTSENSRTINIFIDSVLMSTITTSLHKCTVVTLFPVHVKASTANVTLAAANSSVG 161
Query: 128 FPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
PPLITAMEVF KVNATNVT D+I AGD SM+F+ LSFV++LCVSVLANL
Sbjct: 162 LPPLITAMEVFAKVNATNVTDDSI---AGDGRASMQFSLLSFVMMLCVSVLANL 211
BLAST of MELO3C023811 vs. ExPASy TrEMBL
Match:
A0A0A0KS42 (Malectin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G177650 PE=4 SV=1)
HSP 1 Score: 203.8 bits (517), Expect = 6.3e-49
Identity = 123/178 (69.10%), Postives = 137/178 (76.97%), Query Frame = 0
Query: 4 GNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 63
G PNC NV PD +SPENDPP VL+EAIESVN SSPIILTVDF KSSSS SQ AYF
Sbjct: 93 GKTPPNCNNVGVTPDFESPENDPPPSVLEEAIESVNVSSPIILTVDFPKSSSS-SQSAYF 152
Query: 64 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 123
VLYFTEV + + NRT+NIFIDSVLMSTITT++ KCTVVTLFPV V+ STA VTLAAAN
Sbjct: 153 VLYFTEVEDLFDQKNRTINIFIDSVLMSTITTTVLKCTVVTLFPVDVRGSTAKVTLAAAN 212
Query: 124 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
SS PPLI+AMEVFTKV AT VAG + PS +FTFLS +L++CVSVL NL
Sbjct: 213 SSANLPPLISAMEVFTKVIATGG-------VAGSNGPS-QFTFLSSILMICVSVLVNL 261
BLAST of MELO3C023811 vs. ExPASy TrEMBL
Match:
A0A5A7V3N2 (Leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00030 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47
Identity = 119/174 (68.39%), Postives = 136/174 (78.16%), Query Frame = 0
Query: 8 PNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYFVLYF 67
PNC NV+A PD +SPEN+PP VL+ AIESVN SSPIILTVDF KSSSS SQ AYFVLYF
Sbjct: 96 PNCNNVAASPDFESPENNPPPSVLENAIESVNVSSPIILTVDFPKSSSS-SQSAYFVLYF 155
Query: 68 TEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAANSSVP 127
TEV + ++NRT++IFIDSVLMSTITT++ CTVVTLFPV +K S ANVTLAAANS
Sbjct: 156 TEVADIFGQNNRTIDIFIDSVLMSTITTTVRNCTVVTLFPVDIKGSRANVTLAAANSPTN 215
Query: 128 FPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
PPLI+AMEVFTKV AT VAG + PS +FTFLS VL++CVSVL NL
Sbjct: 216 LPPLISAMEVFTKVIATGG-------VAGSNGPS-QFTFLSSVLMICVSVLVNL 260
BLAST of MELO3C023811 vs. ExPASy TrEMBL
Match:
A0A6J1CDC0 (receptor-like protein kinase At5g59670 OS=Momordica charantia OX=3673 GN=LOC111010171 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.6e-42
Identity = 112/178 (62.92%), Postives = 130/178 (73.03%), Query Frame = 0
Query: 4 GNNSPNCQNVSAIPDSKSPENDPPLFVLQEAIESVNASSPIILTVDFSKSSSSPSQLAYF 63
G PNC N+SAIPD +SPE +PP FVLQEAIES NASSPI+LTVDF K+SS SQ AYF
Sbjct: 225 GATPPNCNNISAIPDFESPEKNPPPFVLQEAIESDNASSPIVLTVDFPKTSSQ-SQSAYF 284
Query: 64 VLYFTEVLNFTSEDNRTMNIFIDSVLMSTITTSIHKCTVVTLFPVHVKASTANVTLAAAN 123
VLYFTE +F EDNRT+NI ID +STITTS+ KCTVVTL+PV V+ S NV+L AAN
Sbjct: 285 VLYFTEAEDFLREDNRTINILIDGQNVSTITTSVSKCTVVTLYPVDVRKSMVNVSLVAAN 344
Query: 124 SSVPFPPLITAMEVFTKVNATNVTGDNIDIVAGDSTPSMRFTFLSFVLILCVSVLANL 182
SS PPLI+AMEVFTKV I I + P+++FT LSFVL+L VLANL
Sbjct: 345 SS-GLPPLISAMEVFTKV---------IPIGGAGAGPAVQFTLLSFVLMLSGCVLANL 391
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0062206.1 | 1.3e-85 | 98.32 | putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. ma... | [more] |
KGN49999.2 | 2.5e-68 | 86.21 | hypothetical protein Csa_000485 [Cucumis sativus] | [more] |
XP_011656170.1 | 2.5e-68 | 86.21 | probable LRR receptor-like serine/threonine-protein kinase At1g51810 [Cucumis sa... | [more] |
XP_038892896.1 | 1.8e-53 | 72.63 | uncharacterized protein At1g24485-like [Benincasa hispida] | [more] |
XP_011656171.1 | 1.3e-48 | 69.10 | leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 [Cuc... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V701 | 6.5e-86 | 98.32 | Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. ... | [more] |
A0A0A0KLJ1 | 1.2e-68 | 86.21 | Malectin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G1776... | [more] |
A0A0A0KS42 | 6.3e-49 | 69.10 | Malectin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G1776... | [more] |
A0A5A7V3N2 | 2.0e-47 | 68.39 | Leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Cucumis mel... | [more] |
A0A6J1CDC0 | 2.6e-42 | 62.92 | receptor-like protein kinase At5g59670 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
Match Name | E-value | Identity | Description | |