MELO3C022782.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C022782.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	mediator of RNA polymerase II transcription subunit 1 isoform X1
Location	chr09: 12170084 .. 12176131 (+)
RNA-Seq Expression	MELO3C022782.jh1
Synteny	MELO3C022782.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCAATTGTAGAGACGTTTGTTTTGTTTTTCGGAGTATCAAAGAGAGAAACCAAAGTCTAAATTTATTTACTTATTTATTTATTTTTCACAATCGCCGTCTCTCCCTTCCAAGACTCTTCTTCTCTATACGCTCCTTCGCTCGCTCTCTCGCTCGCTTCATCTTCTCTCTATCTCTCTATTTCTCTATTTCTCTATTTTTCTCTCTCTCCGCCGTTCCGTTTCTCTCTGCCGTTCTCCCTTCTCTCTGCCACCGCACGGCAGCTGAAACTCATCCAACCCAACAAACAGACAAAAACCCTATTCTCTGTTCCGAACAACCCAAGCCTCATTTTCTCCCATTCACAATCCCTTTCCCTCTCTCTCTCCGCCGCCGCTTTCGTTCTCCACACTCTCAAACTCTCTCTTTACCTATCTATTTTGTTGTCCCCCTCTTAAGCTCGCATTTCTTTTTGTTTTGGGGACATACAGCAACCACTGGGAGGCAGTTATTGAAAGCAGTTACGCCTTCTGGGGTTTCTCTCAATCAGTCTTCCGGGTAGGGTTAGTTCTTCGTCTTCATCGGATATCTCACAGGTTTTATTATCTATCTCTTCTGTATTTCTCTTGCGGGTTTGGACCTCTACGGAAGTTTTTTTTTCTTTTAACGGAGGGTGCATAATTTGGTTTAGGGTTTCTGATAATTTTGTTTTTTTGGGCACATTCAATCGGACTTGGGATTCTGGTTATTCCAATTTCTTATTTAGCTAGGGTTTCTTTTTGTTCTCTGATCGAACTGTTTTGACGGGGATAATCTTCTGTTCTGGAATTGCTTCACCACCTCTTTATTCTTGAGGTATACCTTCTTTATCTTTCTGCATCTCAACCGATTCCCTCAAAGATGAGGGTTTTCCAAGCGTATTTTGCTGGCCGAATCTACAGTTAATCGAACACGGAGGCAGGAAGACGAGAGTGAGACCTTTCCTTTTAAGTTTTAACATTCTTTTTAATTGAACACCTTCATTTTCTCCCTGATATTTCCTCTGTTTTTCATCCTCTGGTATTTCACTCCCGTATGAGAAATAGGGTATATTGATTTTGCGCATAAGATAAGATAAATCCCCTTCATAATGCGTTCCAGCTTGTAGCCAAATTGGTAGCTACTTGCTTGAATACCAGTTGTTGTGAAGTAGGATAGTTGTAGAAGATAGACTTCTTTAGTGGCATTCAGGACATAAATTTGAGAACCATCCCCTGCGTTCTTCTACCGTGTGCGAGTTTGCAATTCTGAAGCAATTCACTGCACACCTGTCTTTTCTGGTGGAACCCTGGATATGCCATAAAGTTGATGATACATATGGTCTGTTGCCGTGACTTGCATAGTCAGGGATGGTCGTTAAAGTTCACCCAGCTTAAAATAGTGGTTAGGCATTTGAAATAATAAAGTACGGGCTAGAGTTTTATAAATTCCTCTGCACAAGGAGTACAGTTTTTGGAAATTTGAGGTGGTAAAGAAGGCAAGACGTGCTCTTTTCTTCTGATATTTTGATCATGTTCAGTATTCCTTATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCACTTTCCGTCGTCTTCTTCCCACTCAGGTAGTGCTTTCATTCTTCTTTTCTTTTTCTTTTTTATTGTTCCTTGCTTCTAATAAAAGATGCGCTCTCTTACTGCTGACTTGCCTCTATTTTGATATTGTGAGCGTTGTTAATGTGTATACTATGTTGTGTAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATCGGTTGAACTTTGGAGATAATTGGGACCGTGATGCTCATGATCCTCTAGGAAAGATTCTTTCCAACAGAATTGATAAAGATGCTTTGCGAAGGTCTCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCACAGAAGGGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACTAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTTCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCCCAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACGTCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTTAATATGGCTGAAGCTTTGGTGCAGTCTCCATCTCGAACTCGTACTGCTCCCCAGGTATCTGAGGTACCATACCAACCTTCTTGTGCTGTATATTATGTTCTCCTTTTGATCTAACAGTCTCATCTTTTATCCCCTCTTTGGTAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTAGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTAATTGGAGCCAATGCAATTGTTGAATCTTTGTTGTTAGATCTTTTCCTACCTACTTATATTTTAATTATTTGGTGTTTGTTGATTAAAAAAATGTGAAGGATCGTACATAAAATATATAAGAAAACTTAGAACAATCTGCACGGTACCTAAACAACTTGTGCCAATCTTCGATTTCAGCTGGGACTAATACTCTCTTCAAAGCTACTTTTGTGTTTTAGTATTAGGGCAGATAAGATGTATCATGTATATATAACAAAAGTTATTTCTGGGCAAATTATAGTGAAAACTATGCGACAAAGTTGCTATATGTTTTGACATTTTTTCTGCACCTGCTGTTGGTGGCTGGTGACTGGTGTTATAAATTTTTGGATTTAGCTTGTTAAATAAACTCTGGCTTCTTCATTTTACGAAATGTAAATTCTTTTGTGGTAGTTTGTTATTCAGCTTCAACTTACTCTCATTGACTAAAGAACAGTGTGTGTTAGATTGCAGAAGTCAAAACATTTGTTAAAAATTTCGAAGCCATTTGCATTGTGCTAGATAACTAGACTACTTTCCCCCCAAATTTGATGAGAAACTCAATTTGAGAACGTTTGGGAGAACAAAGACAAGTGTTTTCTTTCCTGGCTCCTTTTGGAAATTTGTAAGAACTAGATGATAGGAAGGAGATAACCAGATTTGATTTGGGATGCATTCCATAGTATGCCTATTTGTGCTTTGCTACTTTTAACACATTCCATAGTATGCATATTTCTCTCAAGGATGGAAAAGGCCAATGTTAGATTAAATATGCTTTAAAGGAGGTGTAAAGTTGATTTAAGATTGTTGTGCTGTAGTCAATATGTCACTGATGGCTGGTTTTCTTTGTTTGTTAACGTGTTATATTTGGCAGGCAAGTTTTCTATTAACTGAATGTCAATCCCTATTCAGTATTAATAGTTGTAACTTGACTGATTGGTTCTCTTGTAAAGGTTCATTGTCTTCTGTTTTGTCTTTTGAAGCTGATGTAAATTATTGTTAAGTTTCAGTATAGTGATTTAGTAGACTTGCTTTGCGGTATAGTTCTTAAAATAGTCTTGGAACAAAAAAAGTCTTATACTATTTTGTTGTGTTTTATTTTGATGATTTCAAAACTAATTTATACATATCTGAGTCTTCTAAAATTTTAAATAGATTTGAATATGTTATTCTTATATTTACATTCTGAAGAAATAAAGAAGTTAAAAAGCAGACCATATCTTTGCTGATAATCTTTAGTAGACTTGGTTGTGAAGACAATTTTGACATAATGCATCCAAGTTCGCCTTTTCAATATGAAATGGTAAATTTCTACAACAGCGTATTGATTTTAACCTCCATCTCAGCACTAAACATATCTAGGAATACTTATTTCTCATTATTATATCTATCTGCAAATCTTCTGTTTCCTCCCTTTAGATAATCGTTACTGTTTTTTGTTTGACAGGTGCTTAGTTCTTCGGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCATCGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCACGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGTATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTGTGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACTGGAACAACATTGGAAAAAAGACCGTCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCCTCAATCGGCCAATCTAATGAACTAACAAGCGAAGAAATGGGCATTCCCGCAAGTCCTCGTGTTATTGAAAATGGTGCCGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAATATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGGTAAATTTATAAAATTTCTATTGCTCTTGCCTTGGGTTTTCAAAGTGTACTGTTCTTTTTTCTCTGTTAGCTGATGAAATTATAAATTTAATTATTAATTTTGCAGTACATGAACTTGAAGCCATCTCTAAAAATTGGTCGATGCATTCAGCCAAAGATATTTGTTCCATCTGAATCTCGCGAGGACAGCAAGGATGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGAATTACATTTTTCTTTTTCACCCATGAGAAGTTCTAGTTCACATTTTTTAATGGCAGTGGGGTTAGTTCTTTTTTCTTTTTTTCCCCCTTTTTAAATTTTTTCCCCTTCTTTTTTGTTTTTGATGGTTTAAAAGAAATGCTGATGAGAGTTGGTTGGGTTGGAAGAAGAGAGGTGGATGTTAATTGAACACTGAACAGTGCAAATAGTGAAATAAGTTACAGTTGCCCAAATCATCCTTGCTGCCTACCTTTACAGCAGAGGAGTTTTTCCGGTTTTTGAAAAAGGGCAGTTGCTGAGGTTTGGCAGGCCTTAAAGATGTGTATGCAAATTTGCATCTTTTGGTTTATTTTTGCATTTCTTTCTTTCTTTCTTTCTTTTTTTAATTCTGGAAGTTACTAGGAAAAAAAAGTTACTCCTTTCAAGGAAATTGGGAAGTTGTGGAAAATTGAAAAAGGTTTCTAACTTCATTCGGCGTATATTGACTTATTGTTTGAAACGTTACCTTTTTAGAGTTGGGGTAGTGTTAGACTTGTTTTGACATTGAATTGCACTTACTACACATTAAATACGAGGATTTAACTTTGAGATTAACTGCTTAGTGCCATGGAGTCGCCCTAATTTTTAATCCTCAACGTTTGACGAACCTATTTGGCACTATTTTGTATCTCAATAACTTTTTAATATTGTACGCTGTGGTGTGCAACTATTTTCAACTACGTTTGTGTTTTTTAAATTGTAGGTTTAGTAATCTAAATCTTTTATCCATTTTCTCCATGCAAAAACAATGTTTTGTGAATGAGGAAAAAAAAAAGAAAAATCAAGCCTGATTTTGTTGTTCTTGTTCGAAAGTTAACAAGTGTG

mRNA sequence

AATTTCAATTGTAGAGACGTTTGTTTTGTTTTTCGGAGTATCAAAGAGAGAAACCAAAGTCTAAATTTATTTACTTATTTATTTATTTTTCACAATCGCCGTCTCTCCCTTCCAAGACTCTTCTTCTCTATACGCTCCTTCGCTCGCTCTCTCGCTCGCTTCATCTTCTCTCTATCTCTCTATTTCTCTATTTCTCTATTTTTCTCTCTCTCCGCCGTTCCGTTTCTCTCTGCCGTTCTCCCTTCTCTCTGCCACCGCACGGCAGCTGAAACTCATCCAACCCAACAAACAGACAAAAACCCTATTCTCTGTTCCGAACAACCCAAGCCTCATTTTCTCCCATTCACAATCCCTTTCCCTCTCTCTCTCCGCCGCCGCTTTCGTTCTCCACACTCTCAAACTCTCTCTTTACCTATCTATTTTGTTGTCCCCCTCTTAAGCTCGCATTTCTTTTTGTTTTGGGGACATACAGCAACCACTGGGAGGCAGTTATTGAAAGCAGTTACGCCTTCTGGGGTTTCTCTCAATCAGTCTTCCGGGTAGGGTTAGTTCTTCGTCTTCATCGGATATCTCACAGGTTTTATTATCTATCTCTTCTGTATTTCTCTTGCGGGTTTGGACCTCTACGGAAGTTTTTTTTTCTTTTAACGGAGGGTGCATAATTTGGTTTAGGGTTTCTGATAATTTTGTTTTTTTGGGCACATTCAATCGGACTTGGGATTCTGGTTATTCCAATTTCTTATTTAGCTAGGGTTTCTTTTTGTTCTCTGATCGAACTGTTTTGACGGGGATAATCTTCTGTTCTGGAATTGCTTCACCACCTCTTTATTCTTGAGGTATACCTTCTTTATCTTTCTGCATCTCAACCGATTCCCTCAAAGATGAGGGTTTTCCAAGCGTATTTTGCTGGCCGAATCTACAGTTAATCGAACACGGAGGCAGGAAGACGAGAGTGAGACCTTTCCTTTTAAGTTTTAACATTCTTTTTAATTGAACACCTTCATTTTCTCCCTGATATTTCCTCTGTTTTTCATCCTCTGGTATTTCACTCCCGTATGAGAAATAGGGTATATTGATTTTGCGCATAAGATAAGATAAATCCCCTTCATAATGCGTTCCAGCTTGTAGCCAAATTGGTAGCTACTTGCTTGAATACCAGTTGTTGTGAAGTAGGATAGTTGTAGAAGATAGACTTCTTTAGTGGCATTCAGGACATAAATTTGAGAACCATCCCCTGCGTTCTTCTACCGTGTGCGAGTTTGCAATTCTGAAGCAATTCACTGCACACCTGTCTTTTCTGGTGGAACCCTGGATATGCCATAAAGTTGATGATACATATGGTCTGTTGCCGTGACTTGCATAGTCAGGGATGGTCGTTAAAGTTCACCCAGCTTAAAATAGTGGTTAGGCATTTGAAATAATAAAGTACGGGCTAGAGTTTTATAAATTCCTCTGCACAAGGAGTACAGTTTTTGGAAATTTGAGGTGGTAAAGAAGGCAAGACGTGCTCTTTTCTTCTGATATTTTGATCATGTTCAGTATTCCTTATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCACTTTCCGTCGTCTTCTTCCCACTCAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATCGGTTGAACTTTGGAGATAATTGGGACCGTGATGCTCATGATCCTCTAGGAAAGATTCTTTCCAACAGAATTGATAAAGATGCTTTGCGAAGGTCTCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCACAGAAGGGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACTAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTTCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCCCAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACGTCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTTAATATGGCTGAAGCTTTGGTGCAGTCTCCATCTCGAACTCGTACTGCTCCCCAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTAGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTGCTTAGTTCTTCGGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCATCGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCACGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGTATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTGTGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACTGGAACAACATTGGAAAAAAGACCGTCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCCTCAATCGGCCAATCTAATGAACTAACAAGCGAAGAAATGGGCATTCCCGCAAGTCCTCGTGTTATTGAAAATGGTGCCGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAATATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAAATTGGTCGATGCATTCAGCCAAAGATATTTGTTCCATCTGAATCTCGCGAGGACAGCAAGGATGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGAATTACATTTTTCTTTTTCACCCATGAGAAGTTCTAGTTCACATTTTTTAATGGCAGTGGGGTTAGTTCTTTTTTCTTTTTTTCCCCCTTTTTAAATTTTTTCCCCTTCTTTTTTGTTTTTGATGGTTTAAAAGAAATGCTGATGAGAGTTGGTTGGGTTGGAAGAAGAGAGGTGGATGTTAATTGAACACTGAACAGTGCAAATAGTGAAATAAGTTACAGTTGCCCAAATCATCCTTGCTGCCTACCTTTACAGCAGAGGAGTTTTTCCGGTTTTTGAAAAAGGGCAGTTGCTGAGGTTTGGCAGGCCTTAAAGATGTGTATGCAAATTTGCATCTTTTGGTTTATTTTTGCATTTCTTTCTTTCTTTCTTTCTTTTTTTAATTCTGGAAGTTACTAGGAAAAAAAAGTTACTCCTTTCAAGGAAATTGGGAAGTTGTGGAAAATTGAAAAAGGTTTCTAACTTCATTCGGCGTATATTGACTTATTGTTTGAAACGTTACCTTTTTAGAGTTGGGGTAGTGTTAGACTTGTTTTGACATTGAATTGCACTTACTACACATTAAATACGAGGATTTAACTTTGAGATTAACTGCTTAGTGCCATGGAGTCGCCCTAATTTTTAATCCTCAACGTTTGACGAACCTATTTGGCACTATTTTGTATCTCAATAACTTTTTAATATTGTACGCTGTGGTGTGCAACTATTTTCAACTACGTTTGTGTTTTTTAAATTGTAGGTTTAGTAATCTAAATCTTTTATCCATTTTCTCCATGCAAAAACAATGTTTTGTGAATGAGGAAAAAAAAAAGAAAAATCAAGCCTGATTTTGTTGTTCTTGTTCGAAAGTTAACAAGTGTG

Coding sequence (CDS)

ATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCACTTTCCGTCGTCTTCTTCCCACTCAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATCGGTTGAACTTTGGAGATAATTGGGACCGTGATGCTCATGATCCTCTAGGAAAGATTCTTTCCAACAGAATTGATAAAGATGCTTTGCGAAGGTCTCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCACAGAAGGGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACTAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTTCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCCCAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACGTCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTTAATATGGCTGAAGCTTTGGTGCAGTCTCCATCTCGAACTCGTACTGCTCCCCAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTAGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTGCTTAGTTCTTCGGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCATCGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCACGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGTATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTGTGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACTGGAACAACATTGGAAAAAAGACCGTCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCCTCAATCGGCCAATCTAATGAACTAACAAGCGAAGAAATGGGCATTCCCGCAAGTCCTCGTGTTATTGAAAATGGTGCCGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAATATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAAATTGGTCGATGCATTCAGCCAAAGATATTTGTTCCATCTGAATCTCGCGAGGACAGCAAGGATGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGA

Protein sequence

MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRSSFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDDGAGSELSSSDSEA

Homology

[Close]

BLAST of MELO3C022782.jh1 vs. NCBI nr
Match: XP_008460470.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis melo])

HSP 1 Score: 1135 bits (2936), Expect = 0.0
Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL 300

Query: 301 IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK 360
           IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK
Sbjct: 301 IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK 360

Query: 361 SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS 420
           SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS
Sbjct: 361 SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS 420

Query: 421 SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI 480
           SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI
Sbjct: 421 SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI 480

Query: 481 GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA 540
           GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA
Sbjct: 481 GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA 540

Query: 541 AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD 600
           AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD
Sbjct: 541 AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD 600

Query: 601 GAGSELSSSDSEA 613
           GAGSELSSSDSEA
Sbjct: 601 GAGSELSSSDSEA 613

[Close]

BLAST of MELO3C022782.jh1 vs. NCBI nr
Match: XP_008460469.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo] >KAA0067384.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa] >TYK26525.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1130 bits (2922), Expect = 0.0
Identity = 613/616 (99.51%), Postives = 613/616 (99.51%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 613
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of MELO3C022782.jh1 vs. NCBI nr
Match: XP_011655200.1 (mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativus] >KGN51281.2 hypothetical protein Csa_009411 [Cucumis sativus])

HSP 1 Score: 1096 bits (2835), Expect = 0.0
Identity = 595/613 (97.06%), Postives = 601/613 (98.04%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQLSVKTQRLEELAIKQSRQL
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQLSVKTQRLEELAIKQSRQL 300

Query: 301 IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK 360
           IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP  VHANQSRVGHVKPDAQK
Sbjct: 301 IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPDAQK 360

Query: 361 SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS 420
           SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN NVS
Sbjct: 361 SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNINVS 420

Query: 421 SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI 480
           S+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDSCSSVKSPSI
Sbjct: 421 SMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKSPSI 480

Query: 481 GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA 540
           GQSNELTSEEMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDEEEA
Sbjct: 481 GQSNELTSEEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDEEEA 540

Query: 541 AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD 600
           AFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DSKDD
Sbjct: 541 AFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDSKDD 600

Query: 601 GAGSELSSSDSEA 613
           GAGSELSSSDSEA
Sbjct: 601 GAGSELSSSDSEA 612

[Close]

BLAST of MELO3C022782.jh1 vs. NCBI nr
Match: XP_004140377.1 (mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1091 bits (2821), Expect = 0.0
Identity = 595/616 (96.59%), Postives = 601/616 (97.56%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP  VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDS 600

Query: 601 KDDGAGSELSSSDSEA 613
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 615

[Close]

BLAST of MELO3C022782.jh1 vs. NCBI nr
Match: XP_038907228.1 (mediator of RNA polymerase II transcription subunit 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 1021 bits (2640), Expect = 0.0
Identity = 562/615 (91.38%), Postives = 581/615 (94.47%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGG NSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGSNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGD+WDRD+ DPLGKI
Sbjct: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDSWDRDSPDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGE--LFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180
           LSN+IDKDALRRSHSMVSRK GE  LFHRR  TELK+HN+SNGILSGTSV SSIQKAVFE
Sbjct: 121 LSNKIDKDALRRSHSMVSRKLGERELFHRRAATELKNHNNSNGILSGTSVSSSIQKAVFE 180

Query: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSR 300
            GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R  PQLSVKTQRLEELAIKQSR
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARATPQLSVKTQRLEELAIKQSR 300

Query: 301 QLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDA 360
           QLIPVTPSM KAMVL+ SDKSKPKLASRTGELN TIKGGQ QP SVHANQSR G VK DA
Sbjct: 301 QLIPVTPSMTKAMVLNPSDKSKPKLASRTGELNVTIKGGQQQPLSVHANQSRGGLVKSDA 360

Query: 361 QKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTN 420
           QKS+HGKFLVLKPVRENG+SLAAKDVSSPTSNANSMA NSQFALA +V HAPLRSPNNTN
Sbjct: 361 QKSAHGKFLVLKPVRENGISLAAKDVSSPTSNANSMAVNSQFALASAVAHAPLRSPNNTN 420

Query: 421 VSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSP 480
           VSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSS AVLSDSCSSVKSP
Sbjct: 421 VSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSS-AVLSDSCSSVKSP 480

Query: 481 SIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEE 540
           SI  SNELT EE  +PASPRVIENGAVENRNG+ SEEV+ S D+GEKTESHVAAESLDEE
Sbjct: 481 SISHSNELTREETDMPASPRVIENGAVENRNGDGSEEVRASCDTGEKTESHVAAESLDEE 540

Query: 541 EAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSK 600
           EAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCI+PKIFVPSES EDSK
Sbjct: 541 EAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIKPKIFVPSESHEDSK 600

Query: 601 DDGAGSELSSSDSEA 613
           D GAGSELSSSDSEA
Sbjct: 601 D-GAGSELSSSDSEA 613

[Close]

BLAST of MELO3C022782.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CC42 (mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1135 bits (2936), Expect = 0.0
Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEELAIKQSRQL 300

Query: 301 IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK 360
           IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK
Sbjct: 301 IPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQK 360

Query: 361 SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS 420
           SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS
Sbjct: 361 SSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVS 420

Query: 421 SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI 480
           SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI
Sbjct: 421 SVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSI 480

Query: 481 GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA 540
           GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA
Sbjct: 481 GQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEA 540

Query: 541 AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD 600
           AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD
Sbjct: 541 AFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDD 600

Query: 601 GAGSELSSSDSEA 613
           GAGSELSSSDSEA
Sbjct: 601 GAGSELSSSDSEA 613

[Close]

BLAST of MELO3C022782.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DT29 (Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001070 PE=4 SV=1)

HSP 1 Score: 1130 bits (2922), Expect = 0.0
Identity = 613/616 (99.51%), Postives = 613/616 (99.51%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 613
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of MELO3C022782.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CDT9 (mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1130 bits (2922), Expect = 0.0
Identity = 613/616 (99.51%), Postives = 613/616 (99.51%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 613
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of MELO3C022782.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KN63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1)

HSP 1 Score: 1091 bits (2821), Expect = 0.0
Identity = 595/616 (96.59%), Postives = 601/616 (97.56%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP  VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGT-ASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDS 600

Query: 601 KDDGAGSELSSSDSEA 613
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 615

[Close]

BLAST of MELO3C022782.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FM76 (uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC111445235 PE=4 SV=1)

HSP 1 Score: 984 bits (2545), Expect = 0.0
Identity = 543/617 (88.01%), Postives = 568/617 (92.06%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTP 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGST 
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKP 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP PSSVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSNANS     QFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSNANS-----QFALAPSVPHAPLRSPNN 420

Query: 421 TNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+SVERK+ASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLD 540
           SPSIGQSNELT EE+  PASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540

Query: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600

Query: 601 SKDDGAGSELSSSDSEA 613
           SKD GAGSELSSSDSEA
Sbjct: 601 SKD-GAGSELSSSDSEA 611

[Close]

BLAST of MELO3C022782.jh1 vs. TAIR 10
Match: AT1G36990.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). )

HSP 1 Score: 422.9 bits (1086), Expect = 4.3e-118
Identity = 307/611 (50.25%), Postives = 388/611 (63.50%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLS-QSRNRISKTTGDFDTSR 60
           M++ E +L PEWLRS+G  +GGG+SNH   SSSSHSD  SL   SRNR S++  D D+  
Sbjct: 1   MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60

Query: 61  SSFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDAHDPL 120
           S FLDR+SS+NSRR SSNGS+KHAYSS  FNR  RDKDR ++KDR+++ D WD D   PL
Sbjct: 61  SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120

Query: 121 GKILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSS-----NGILSGTSVGSSI 180
             IL+ R D D LRRSHSMV+RKQGE   R +   L +  SS     NG+LSG S+G+S 
Sbjct: 121 RTILTGR-DPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSF 180

Query: 181 QKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVP 240
           Q+  F+KDFPSLG+EEKQ   ++ RVSSPG+SS VQ+LP+GNSALI GGEGWTSALAEVP
Sbjct: 181 QRTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALI-GGEGWTSALAEVP 240

Query: 241 SMIGSTPGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEEL 300
           ++I      S       A S AG L+  +GLNMAEALVQ+P+RT T PQ SVKTQRLE+L
Sbjct: 241 NVIEKACTGSLTSPKANAVS-AGTLTGPSGLNMAEALVQAPARTHTPPQGSVKTQRLEDL 300

Query: 301 AIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGE-LNATIKGGQPQPS----SVHAN 360
           AIKQSRQLIPV PS PK + L+SSDKSK K   RTGE   A  +    QP+    S  +N
Sbjct: 301 AIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSFQSN 360

Query: 361 QSRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQ-FALAPSV 420
            S  G +KP+       K LVLKP RENGVS A K+  SP++N N+ AA+SQ  +   S 
Sbjct: 361 PS--GQIKPEK------KLLVLKPARENGVS-AVKESGSPSANTNTRAASSQLMSNTQST 420

Query: 421 PHAPLRSPNNTNVSSVERKIAS-LDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSS 480
             AP+RS N    S  E K AS   + +G T+EK+PS +Q QSR+ F++ +K+K + S+S
Sbjct: 421 QSAPVRSTN----SPKELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTASTS 480

Query: 481 AVLSDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEK 540
            + +D  SS  S S     +L S +  I + P         +    S  EV  S      
Sbjct: 481 -ITTDPVSSSTSASSSVEVKLNSSKDLIASDP--------SSSQATSGVEVTDSVQVASH 540

Query: 541 TESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQP 597
           T    A ++ DEEEA FLRSLGW E+ GE E LTEEEI+SF  +Y  L+P          
Sbjct: 541 TSGFEATDTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQYKELRP------LFPE 579

[Close]

BLAST of MELO3C022782.jh1 vs. TAIR 10
Match: AT4G08510.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). )

HSP 1 Score: 313.5 bits (802), Expect = 3.7e-85
Identity = 254/590 (43.05%), Postives = 338/590 (57.29%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           ME+ EP+LVPEWLRS+G  +G G+SN       S SD  SL  S+NR +++  D D+  S
Sbjct: 1   MEKREPSLVPEWLRSSGHGSGVGSSN-------SLSD--SLRNSKNRNARSRSDADSVGS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDAHDPLG 120
            FLDR+SS+N+RR SSNGS+KHAYSS  FNR +RDKDR +EKDR+++ D WD D+  P G
Sbjct: 61  PFLDRSSSTNTRRGSSNGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFG 120

Query: 121 KILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSN-------GILSGTSVGSS 180
             L  R  ++ LRRSHSM +RKQG   H   G  +   N  N       GIL GTS   S
Sbjct: 121 TFLIGR-GEEPLRRSHSMTTRKQGN--HLAQGFTVGYKNGGNINTFNGHGILPGTSPVKS 180

Query: 181 IQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEV 240
            ++  F KDFP L  EE+ G  ++ R+SSPG S   QSL + N ALI+ GEGWTSALAEV
Sbjct: 181 SKRMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTAQSLSVANPALII-GEGWTSALAEV 240

Query: 241 PSMIGSTPGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQLSVKTQRLEE 300
           P++I  + G+ S      + + +GP    A  NMAEALVQ+P RT T PQ     Q LE+
Sbjct: 241 PNVIEKSGGAESHANVGNSATLSGP----ACRNMAEALVQAPGRTGTPPQ----AQTLED 300

Query: 301 LAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELN-ATIKGGQPQPSSVHAN-QS 360
            AI+QSRQLIPV PS PK  V +SSDKSK K   R+GE   A+ +  Q Q S +  N QS
Sbjct: 301 RAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLGNMQS 360

Query: 361 RVG-HVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPH 420
             G  +KPD  K    K ++LKP RENGV           S  NS  A SQ   APS   
Sbjct: 361 NPGSQIKPDTTK----KLVILKPARENGVVAGG-------SPPNSRVAASQPTTAPSTQF 420

Query: 421 -APLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAV 480
            A +RS N       + + AS+++  G   EK+ SL+Q QSR+ F++ +K+KT  + S  
Sbjct: 421 TASVRSTNGPR----DLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNISTD 480

Query: 481 LSDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTE 540
            S + S + S    Q+N         P+SP+  E   +        E V+   +  E+  
Sbjct: 481 PSKTSSCILSSVEEQANSSKELVASDPSSPQAAERDEI-------MESVEKVSNVAERIS 540

Query: 541 SHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSL 578
              +A   D +EAAFL+SLGWDE+  ++   T EE+  + +++   KPSL
Sbjct: 541 RFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWCKKF---KPSL 544

The following BLAST results are available for this feature:

BLAST of MELO3C022782.jh1 vs. NCBI nr


Match Name	Identity	Description
XP_008460470.1	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cuc...	[more]
XP_008460469.1	99.51	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cuc...	[more]
XP_011655200.1	97.06	mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativu...	[more]
XP_004140377.1	96.59	mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis sativu...	[more]
XP_038907228.1	91.38	mediator of RNA polymerase II transcription subunit 1 isoform X2 [Benincasa hisp...	[more]

BLAST of MELO3C022782.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C022782.jh1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A1S3CC42	100.00	mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo...	[more]
A0A5D3DT29	99.51	Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CDT9	99.51	mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A0A0KN63	96.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1	[more]
A0A6J1FM76	88.01	uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]

BLAST of MELO3C022782.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36990.1	4.3e-118	50.25	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXP...	[more]
AT4G08510.1	3.7e-85	43.05	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..489
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 591..605
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 589..613
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 504..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 518..534
None	No IPR available	PANTHER	PTHR34112	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..612
None	No IPR available	PANTHER	PTHR34112:SF13	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..612

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022782.jh1.t1	MELO3C022782.jh1.t1	mRNA