MELO3C022354 (gene) Melon (DHL92) v4

Overview


Name	MELO3C022354
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	light-regulated protein-like
Location	chr11: 30643252 .. 30645163 (-)
RNA-Seq Expression	MELO3C022354
Synteny	MELO3C022354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGGGCCAAACCGCAAAGGGAAGGTCTTTACGGGGGGTGGCCATTAATTTGAGTTTGTCCTTACCCTCGAAATCCATACTTCTATGTGGGACCTCAACCAAACATGCTCCATAATAGGAGCTGCTCACCCATTCTCTGACCAAAAAATATGTCTCACCTATCACCTCCCTAACAATGCCTTCATCATTATAGAACCTTTTTTTTTTTTTACTTAGACAGTCTTTTAGTAATACTTCATGATGGAAACTCTAATGTTTGTCATGATAAAATATAATTTGATTTATTAAAGTTTTCTTTGTTTCTTCTCTGCAGTTGATATGGAAGTTAAAATTGATGCGGATTATTAAGATCTTAGAATTTTGTTTGATATAATAGTAGATTTCAGCTTTAATATGGAACCAAATTGACTAGCCAACAACCTACCTAAAAGAGATAAAGAGTCTTGACACCACCACTAATCAAATATTCTAGAGAGAATTATTCTTGTAATTGTAAATGATCTACTAACGAGCATGGTTCAAATGAGGCAAGTTCTCAGATATTTAAGCATATTATCAAAGATTAACGGAATCAAAGCATATCTATTGATTCGCTTCAAGAGTGTTTGCGATATGAGAAATATCAAGAAATGGGAGATAAAGAGACAAAAGATGTAATAATAATATATCAATTCAAATCTACACAACCACTCGTTTTTCAAGGAGAAAAAAAGTTGCTTTCAATTCTACATTATTGATTTAAAACCTTATCCAGTCACGAGATATCTTTCCAACTTTATCTGTTTAACCTTATAAATCTGAATTCGACTCTAAAGATACATCCAAGCACCAACTTCGTGGCAGACCGAACCGAACCATTGTTCATCATGCAGTTGCAGGCAGCTCTTTCCATAGCACCTCCATCATGCTCCCTCCTCCCACCAACAGCCAAATTAATGGCCTTCTCAATCCAAACTAGGTCCCTGCCAAGGCAAAGCCAAGGCACCCTAAAAGCAAAGGCAAGTGCAGTAGGACAAGAACCTTCAACTGTTGACTACAGCTCCATGTCCTCGTAAGCCAAATCATTTTATACCTGGTTGTTACCCCACAATATGTCTGATTTTAAGACCTTCATTTACTCTTTTGTGTCTATTTTTGAAGTGTTTTTCCAGCAGAGGCTTGTGACACTGTAGGAGGTGAAGCTTGTGATGTGGAAATGTATCCTGAAGTAAAACTAAAACCAGAGGCCAAAAAAGGGAGTAGTGTTACAGAGCCAGTTGAGAGAGAGTATCTACAATATGACAGTCCCAAGACGTAAGATCTCAAAGCAACAAACCATAGGACCTTTCATCCTCTATTAATTCGTTTTTTATGAAACAACACTATTTCATACTTCTACATGCATTGATATTCTTGTCTTTTAAATGATTCTTGCAGAGTCTTTCCGGCGGAGGCTTGTGATGATTTGGGTGGTGAGTTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAGAAAAAAAAATCTTATTGGGAATTAGTACATATAAACAAGGGTTGAGCCTAGAGTCAACTTTCAGTTGTTTTTTTAATTTTCTTTTCTCCTTTGCTCTCTTATGCCTGTAAATGATTAATTGACTACAAAGTTCTTCAATGCTGATCAATACTCGATATTCTGAAAGAACATAAAGACCATCTCTTCTAAGATAAATACAAATTATAGTAGTAGAACGACAGAGGGAACCATTTTTGTGATCGTCTGGAAGGCAATAATTTTCCATAAACAAACTGCTTGTTCACTTAGTGAGAAAATAGAAAGAATTTCAAGCTGTTTCAAGATTGACATATCAAAAGCTTGATTGATTTATAATATACAGAGAACAATGAATCACCCATCATAAAAGTTATCTTATATAGACACTAAGATTAGAC

mRNA sequence

ATGGGAGGGGCCAAACCGCAAAGGGAAGACAGTCTTTTAGTAATACTTCATGATGGAAACTCTAATATACATCCAAGCACCAACTTCGTGGCAGACCGAACCGAACCATTGTTCATCATGCAGTTGCAGGCAGCTCTTTCCATAGCACCTCCATCATGCTCCCTCCTCCCACCAACAGCCAAATTAATGGCCTTCTCAATCCAAACTAGGTCCCTGCCAAGGCAAAGCCAAGGCACCCTAAAAGCAAAGGCAAGTGCAGTAGGACAAGAACCTTCAACTGTTGACTACAGCTCCATGTCCTCTGTTTTTCCAGCAGAGGCTTGTGACACTGTAGGAGGTGAAGCTTGTGATGTGGAAATGTATCCTGAAGTAAAACTAAAACCAGAGGCCAAAAAAGGGAGTAGTGTTACAGAGCCAGTTGAGAGAGAGTATCTACAATATGACAGTCCCAAGACAGTCTTTCCGGCGGAGGCTTGTGATGATTTGGGTGGTGAGTTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAGAAAAAAAAATCTTATTGGGAATTAGTACATATAAACAAGGGTTGAGCCTAGAGTCAACTTTCAGTTGTTTTTTTAATTTTCTTTTCTCCTTTGCTCTCTTATGCCTGTAAATGATTAATTGACTACAAAGTTCTTCAATGCTGATCAATACTCGATATTCTGAAAGAACATAAAGACCATCTCTTCTAAGATAAATACAAATTATAGTAGTAGAACGACAGAGGGAACCATTTTTGTGATCGTCTGGAAGGCAATAATTTTCCATAAACAAACTGCTTGTTCACTTAGTGAGAAAATAGAAAGAATTTCAAGCTGTTTCAAGATTGACATATCAAAAGCTTGATTGATTTATAATATACAGAGAACAATGAATCACCCATCATAAAAGTTATCTTATATAGACACTAAGATTAGAC

Coding sequence (CDS)

ATGGGAGGGGCCAAACCGCAAAGGGAAGACAGTCTTTTAGTAATACTTCATGATGGAAACTCTAATATACATCCAAGCACCAACTTCGTGGCAGACCGAACCGAACCATTGTTCATCATGCAGTTGCAGGCAGCTCTTTCCATAGCACCTCCATCATGCTCCCTCCTCCCACCAACAGCCAAATTAATGGCCTTCTCAATCCAAACTAGGTCCCTGCCAAGGCAAAGCCAAGGCACCCTAAAAGCAAAGGCAAGTGCAGTAGGACAAGAACCTTCAACTGTTGACTACAGCTCCATGTCCTCTGTTTTTCCAGCAGAGGCTTGTGACACTGTAGGAGGTGAAGCTTGTGATGTGGAAATGTATCCTGAAGTAAAACTAAAACCAGAGGCCAAAAAAGGGAGTAGTGTTACAGAGCCAGTTGAGAGAGAGTATCTACAATATGACAGTCCCAAGACAGTCTTTCCGGCGGAGGCTTGTGATGATTTGGGTGGTGAGTTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAG

Protein sequence

MGGAKPQREDSLLVILHDGNSNIHPSTNFVADRTEPLFIMQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY

Homology

[Close]

BLAST of MELO3C022354 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 65/128 (50.78%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 42  LQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSMSS 101
           +Q A S      ++LP   K  +  IQ    PR+    ++A A+AV  E + VDYSS  S
Sbjct: 1   MQTAASSVVGLSAVLPAAVKGRSLQIQA---PRRVALRVRAAAAAVAVEAAEVDYSSNIS 60

Query: 102 VFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSS--VTEPVEREYLQYDSPKTVFPAEAC 161
           VFP EACD +GGEAC+V+MYPE KL   A    S    E V+R+YL YD P TVFP EAC
Sbjct: 61  VFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTTVFPEEAC 120

Query: 162 DDLGGEFC 168
           DDLGGEFC
Sbjct: 121 DDLGGEFC 125

[Close]

BLAST of MELO3C022354 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.5e-24
Identity = 61/140 (43.57%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 35  EPLFIMQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTV 94
           +P  ++ L +++S +P    LLP   K    S          +    + +S++  +P+TV
Sbjct: 8   KPTILLPLPSSVS-SPKLTFLLPHATKASRLS--------SLRSNNSSSSSSLTSDPNTV 67

Query: 95  DY-SSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 154
           DY SS+ SVFPAEAC+ + G AC  ++YPEVKL  +       +EPV+REY +Y+SPKTV
Sbjct: 68  DYNSSILSVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTV 127

Query: 155 FPAEACDDLGGEFCDPEYQK 174
           F  EACDDLGGEFC+P++QK
Sbjct: 128 FREEACDDLGGEFCEPDFQK 138

[Close]

BLAST of MELO3C022354 vs. NCBI nr
Match: XP_008459906.1 (PREDICTED: light-regulated protein-like [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 40  MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 99
           MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 60

Query: 100 SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 159
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 160 DDLGGEFCDPEYQKGVY 177
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of MELO3C022354 vs. NCBI nr
Match: KAA0039854.1 (light-regulated protein-like [Cucumis melo var. makuwa] >TYK24647.1 light-regulated protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 3.8e-69
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 40  MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 99
           MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQS+GTLKAKASAVGQEPSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSKGTLKAKASAVGQEPSTVDYSSM 60

Query: 100 SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 159
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 160 DDLGGEFCDPEYQKGVY 177
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of MELO3C022354 vs. NCBI nr
Match: NP_001267523.1 (light-regulated protein-like [Cucumis sativus] >KGN46414.1 hypothetical protein Csa_005346 [Cucumis sativus] >BAA06153.1 CR9 [Cucumis sativus] >CBZ13178.1 putative cytokinin-repressed protein [Cucumis sativus] >prf||2016504A cytokinin-repressed protein CR9 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 1.9e-65
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 40  MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 99
           MQ QAALSIA PSCSLLPPTAK MAFSI TRS+PRQS+GTLKAKASAVGQ+PSTVDYSSM
Sbjct: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60

Query: 100 SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 159
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG+SVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 160 DDLGGEFCDPEYQKGVY 177
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of MELO3C022354 vs. NCBI nr
Match: XP_038906788.1 (light-regulated protein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-56
Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 40  MQLQAALSIA-PPSCSLLPPTAKLMAFSIQTRSLPRQ-----SQGTLKAKASAVGQEPST 99
           MQLQAALS+A P SCSLLPPTAK MAFS+++RS+ R       +  LKAKASAVGQ+PST
Sbjct: 1   MQLQAALSVATPSSCSLLPPTAKSMAFSVRSRSIGRHPTSQTQRPILKAKASAVGQDPST 60

Query: 100 VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 159
           VDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKK  SVTEPV+REYLQYDSPKTV
Sbjct: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKQGSVTEPVDREYLQYDSPKTV 120

Query: 160 FPAEACDDLGGEFCDPEYQKGVY 177
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of MELO3C022354 vs. NCBI nr
Match: XP_022953556.1 (light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-54
Identity = 117/143 (81.82%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 40  MQLQAALSIA-PPSCSLLPPTAKLMAFSIQTRSLPRQ-----SQGTLKAKASAVGQEPST 99
           MQLQAA S+A P SC LLPPT KLMAFSI +RS+ R       +  LKAKASAVGQ+PST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 100 VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 159
           VDYSSMSSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E V+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 160 FPAEACDDLGGEFCDPEYQKGVY 177
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of MELO3C022354 vs. ExPASy TrEMBL
Match: A0A1S3CBQ8 (light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.3e-70
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 40  MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 99
           MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 60

Query: 100 SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 159
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 160 DDLGGEFCDPEYQKGVY 177
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of MELO3C022354 vs. ExPASy TrEMBL
Match: A0A5D3DLY7 (Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001960 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 40  MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 99
           MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQS+GTLKAKASAVGQEPSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSKGTLKAKASAVGQEPSTVDYSSM 60

Query: 100 SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 159
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 160 DDLGGEFCDPEYQKGVY 177
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of MELO3C022354 vs. ExPASy TrEMBL
Match: Q39636 (CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.4e-66
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 40  MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 99
           MQ QAALSIA PSCSLLPPTAK MAFSI TRS+PRQS+GTLKAKASAVGQ+PSTVDYSSM
Sbjct: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60

Query: 100 SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 159
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG+SVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 160 DDLGGEFCDPEYQKGVY 177
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of MELO3C022354 vs. ExPASy TrEMBL
Match: A0A6J1GNA5 (light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.4e-55
Identity = 117/143 (81.82%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 40  MQLQAALSIA-PPSCSLLPPTAKLMAFSIQTRSLPRQ-----SQGTLKAKASAVGQEPST 99
           MQLQAA S+A P SC LLPPT KLMAFSI +RS+ R       +  LKAKASAVGQ+PST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 100 VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 159
           VDYSSMSSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E V+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 160 FPAEACDDLGGEFCDPEYQKGVY 177
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of MELO3C022354 vs. ExPASy TrEMBL
Match: A0A6J1JSC1 (light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488476 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54
Identity = 115/143 (80.42%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 40  MQLQAALSIA-PPSCSLLPPTAKLMAFSIQTRSLPRQ-----SQGTLKAKASAVGQEPST 99
           MQLQAA S+A P SC LLPPT KLMAFS+ +RS+ R       +  LKAKASAVGQ+PST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSVPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 100 VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 159
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E V+REYLQYDSPKTV
Sbjct: 61  VDYSSVSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 160 FPAEACDDLGGEFCDPEYQKGVY 177
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of MELO3C022354 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-25
Identity = 61/140 (43.57%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 35  EPLFIMQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTV 94
           +P  ++ L +++S +P    LLP   K    S          +    + +S++  +P+TV
Sbjct: 8   KPTILLPLPSSVS-SPKLTFLLPHATKASRLS--------SLRSNNSSSSSSLTSDPNTV 67

Query: 95  DY-SSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTV 154
           DY SS+ SVFPAEAC+ + G AC  ++YPEVKL  +       +EPV+REY +Y+SPKTV
Sbjct: 68  DYNSSILSVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTV 127

Query: 155 FPAEACDDLGGEFCDPEYQK 174
           F  EACDDLGGEFC+P++QK
Sbjct: 128 FREEACDDLGGEFCEPDFQK 138

The following BLAST results are available for this feature:

BLAST of MELO3C022354 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03200	1.3e-24	50.78	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q96500	6.5e-24	43.57	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]

BLAST of MELO3C022354 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459906.1	1.3e-69	100.00	PREDICTED: light-regulated protein-like [Cucumis melo]	[more]
KAA0039854.1	3.8e-69	99.27	light-regulated protein-like [Cucumis melo var. makuwa] >TYK24647.1 light-regula...	[more]
NP_001267523.1	1.9e-65	94.16	light-regulated protein-like [Cucumis sativus] >KGN46414.1 hypothetical protein ...	[more]
XP_038906788.1	1.3e-56	83.22	light-regulated protein, chloroplastic-like [Benincasa hispida]	[more]
XP_022953556.1	1.5e-54	81.82	light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated ...	[more]

BLAST of MELO3C022354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBQ8	6.3e-70	100.00	light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1	[more]
A0A5D3DLY7	1.8e-69	99.27	Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
Q39636	9.4e-66	94.16	CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1	[more]
A0A6J1GNA5	7.4e-55	81.82	light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 ...	[more]
A0A6J1JSC1	2.8e-54	80.42	light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of MELO3C022354 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	4.6e-25	43.57	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 42..168 e-value: 2.7E-47 score: 160.4
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 42..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022354.1	MELO3C022354.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast