MELO3C021924 (gene) Melon (DHL92) v4

Overview


Name	MELO3C021924
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr02: 5968594 .. 5969397 (-)
RNA-Seq Expression	MELO3C021924
Synteny	MELO3C021924

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGCTCATTTAATGATGCGATGGCTAAATCGCAGAAGGTTTACTGCTATAAGACCTCCAGTTGAGCAATTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTACCAGGCTCTATATTATCCAACCAGGAGCTATTGTGAGTTATCTGATATACATTTAAATATTGTATAGTTGTTTTTAGTGCAAATTTGTTTTCAATGCTTTTTAATTCATTTTAATATTTTACATAGATCAAATAATAATAGACTTAAGAATGTTGCAGATGATCCACAACAGGTCCTAAATATATGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCCCTATTGTACATGCTCCAATTCAGAGGAGACGTTCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCCGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAATGATGATGCGAGCATTTGAAACAACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAACAGGATATTATAATTCAAAGGCAGGTTCGTCATCATCAAACTTTAGACAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATACATGCATTGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGATACTCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAGCAACAAAGAGTTCAGAGTCGACAACCAACTAGAAAT

mRNA sequence

AGTTGCTCATTTAATGATGCGATGGCTAAATCGCAGAAGGTTTACTGCTATAAGACCTCCAGTTGAGCAATTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTACCAGGCTCTATATTATCCAACCAGGAGCTATTGTGAGTTATCTGAGATCAAATAATAATAGACTTAAGAATGTTGCAGATGATCCACAACAGGTCCTAAATATATGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCCCTATTGTACATGCTCCAATTCAGAGGAGACGTTCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAGTGCCTCCCGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAATGATGATAGTCGGTCAATCGTCAGACTTTGGAACAGGATATTATAATTCAAAGGCAGGTTCGTCATCATCAAACTTTAGACAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATACATGCATTGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGATACTCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAGCAACAAAGAGTTCAGAGTCGACAACCAACTAGAAAT

Coding sequence (CDS)

ATGATGCGATGGCTAAATCGCAGAAGGTTTACTGCTATAAGACCTCCAGTTGAGCAATTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTACCAGGCTCTATATTATCCAACCAGGAGCTATTGTGAGTTATCTGAGATCAAATAATAATAGACTTAAGAATGTTGCAGATGATCCACAACAGGTCCTAAATATATGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCCCTATTGTACATGCTCCAATTCAGAGGAGACGTTCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAGTGCCTCCCGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAATGATGATAGTCGGTCAATCGTCAGACTTTGGAACAGGATATTATAATTCAAAGGCAGGTTCGTCATCATCAAACTTTAGACAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATACATGCATTGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGATACTCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAGCAACAAAGAGTTCAGAGTCGACAACCAACTAGAAAT

Protein sequence

MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLEEVPPVTQTQSEHGYVSPVMMIVGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN

Homology

[Close]

BLAST of MELO3C021924 vs. NCBI nr
Match: KAA0051227.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 357.8 bits (917), Expect = 6.5e-95
Identity = 193/237 (81.43%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGA+              
Sbjct: 57  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAV-------------- 116

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL-------EEVPPV 120
                 VLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL       EEVPPV
Sbjct: 117 ------VLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLEEVDQHGEEVPPV 176

Query: 121 TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
           TQTQS+HGYVSPVMM+           VGQSSDFGTGYYNS+AG SSSNFRQQYCDLGSD
Sbjct: 177 TQTQSKHGYVSPVMMMQAFETTYYDSGVGQSSDFGTGYYNSEAGPSSSNFRQQYCDLGSD 236

Query: 181 SSSSYMHCHGRGRGEHNEYLYYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN 220
           SSSSYMHCHGRGRGEHNEYLYYEVPAAILEQ DEQQQQENQEEIQQQRVQSRQPTRN
Sbjct: 237 SSSSYMHCHGRGRGEHNEYLYYEVPAAILEQLDEQQQQENQEEIQQQRVQSRQPTRN 273

[Close]

BLAST of MELO3C021924 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 186/254 (73.23%), Postives = 202/254 (79.53%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           +MRW NRRRFTA  PP+EQFDMDVTQEYINWYKNI++LYI QPGA++S+LRSNN RL+NV
Sbjct: 365 VMRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNV 424

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL-------EEVPPV 120
           ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQE DQL       EEVPP+
Sbjct: 425 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM 484

Query: 121 TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
           TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGSD
Sbjct: 485 TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSD 544

Query: 181 SSSSYMHCHGRGRGEHNEYLYYEVPAAILE---------------QSDEQQQQENQEEIQ 220
            SSSYMH HGRGRGEHNEYLYYEVPAA+ E               QSDEQQQQENQEEIQ
Sbjct: 545 PSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQ 604

[Close]

BLAST of MELO3C021924 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 7.7e-88
Identity = 184/254 (72.44%), Postives = 200/254 (78.74%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NV
Sbjct: 252 VMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNV 311

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLE-------EVPPV 120
           ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQE DQLE       EVPP+
Sbjct: 312 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM 371

Query: 121 TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
           TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD
Sbjct: 372 TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSD 431

Query: 181 SSSSYMHCHGRGRGEHNEYLYYEVPAAILE---------------QSDEQQQQENQEEIQ 220
            SSSYMH HGRGRG+HNEYLYYEVPAA+ E               QSDEQQQQEN EEIQ
Sbjct: 432 PSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQ 491

[Close]

BLAST of MELO3C021924 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 7.7e-88
Identity = 184/254 (72.44%), Postives = 200/254 (78.74%), Query Frame = 0


Query: 1    MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
            +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NV
Sbjct: 1013 VMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNV 1072

Query: 61   ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLE-------EVPPV 120
            ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQE DQLE       EVPP+
Sbjct: 1073 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM 1132

Query: 121  TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
            TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD
Sbjct: 1133 TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSD 1192

Query: 181  SSSSYMHCHGRGRGEHNEYLYYEVPAAILE---------------QSDEQQQQENQEEIQ 220
             SSSYMH HGRGRG+HNEYLYYEVPAA+ E               QSDEQQQQEN EEIQ
Sbjct: 1193 PSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQ 1252

[Close]

BLAST of MELO3C021924 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 3.6e-85
Identity = 178/249 (71.49%), Postives = 196/249 (78.71%), Query Frame = 0


Query: 2   MRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVA 61
           MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+N+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 62  DDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL-------EEVPPV- 121
           DDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQESDQL       EEVPP+ 
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 122 -TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGS 181
            TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 182 DSSSSYMHCHGRGRGEHNEYLYYEVP---------------AAILEQSDEQQQQENQEEI 216
           D SSSYMH HGRGRGEHNEYLYY+VP               AA+ EQSDEQQQQEN EEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

[Close]

BLAST of MELO3C021924 vs. ExPASy TrEMBL
Match: A0A5A7U9Y2 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00310 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.1e-95
Identity = 193/237 (81.43%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGA+              
Sbjct: 57  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAV-------------- 116

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL-------EEVPPV 120
                 VLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL       EEVPPV
Sbjct: 117 ------VLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLEEVDQHGEEVPPV 176

Query: 121 TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
           TQTQS+HGYVSPVMM+           VGQSSDFGTGYYNS+AG SSSNFRQQYCDLGSD
Sbjct: 177 TQTQSKHGYVSPVMMMQAFETTYYDSGVGQSSDFGTGYYNSEAGPSSSNFRQQYCDLGSD 236

Query: 181 SSSSYMHCHGRGRGEHNEYLYYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN 220
           SSSSYMHCHGRGRGEHNEYLYYEVPAAILEQ DEQQQQENQEEIQQQRVQSRQPTRN
Sbjct: 237 SSSSYMHCHGRGRGEHNEYLYYEVPAAILEQLDEQQQQENQEEIQQQRVQSRQPTRN 273

[Close]

BLAST of MELO3C021924 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.9e-90
Identity = 186/254 (73.23%), Postives = 202/254 (79.53%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           +MRW NRRRFTA  PP+EQFDMDVTQEYINWYKNI++LYI QPGA++S+LRSNN RL+NV
Sbjct: 365 VMRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNV 424

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL-------EEVPPV 120
           ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQE DQL       EEVPP+
Sbjct: 425 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM 484

Query: 121 TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
           TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGSD
Sbjct: 485 TQTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSD 544

Query: 181 SSSSYMHCHGRGRGEHNEYLYYEVPAAILE---------------QSDEQQQQENQEEIQ 220
            SSSYMH HGRGRGEHNEYLYYEVPAA+ E               QSDEQQQQENQEEIQ
Sbjct: 545 PSSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQ 604

[Close]

BLAST of MELO3C021924 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.7e-88
Identity = 184/254 (72.44%), Postives = 200/254 (78.74%), Query Frame = 0


Query: 1    MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
            +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NV
Sbjct: 1013 VMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNV 1072

Query: 61   ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLE-------EVPPV 120
            ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQE DQLE       EVPP+
Sbjct: 1073 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM 1132

Query: 121  TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
            TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD
Sbjct: 1133 TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSD 1192

Query: 181  SSSSYMHCHGRGRGEHNEYLYYEVPAAILE---------------QSDEQQQQENQEEIQ 220
             SSSYMH HGRGRG+HNEYLYYEVPAA+ E               QSDEQQQQEN EEIQ
Sbjct: 1193 PSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQ 1252

[Close]

BLAST of MELO3C021924 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.7e-88
Identity = 184/254 (72.44%), Postives = 200/254 (78.74%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NV
Sbjct: 252 VMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNV 311

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQLE-------EVPPV 120
           ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQE DQLE       EVPP+
Sbjct: 312 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPM 371

Query: 121 TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSD 180
           TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD
Sbjct: 372 TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSD 431

Query: 181 SSSSYMHCHGRGRGEHNEYLYYEVPAAILE---------------QSDEQQQQENQEEIQ 220
            SSSYMH HGRGRG+HNEYLYYEVPAA+ E               QSDEQQQQEN EEIQ
Sbjct: 432 PSSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQ 491

[Close]

BLAST of MELO3C021924 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85
Identity = 178/250 (71.20%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNV 60
           +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+N+
Sbjct: 743 VMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNI 802

Query: 61  ADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESDQL-------EEVPPV 120
           ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LVQESDQL       EEVPP+
Sbjct: 803 ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPM 862

Query: 121 --TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLG 180
             TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLG
Sbjct: 863 TQTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLG 922

Query: 181 SDSSSSYMHCHGRGRGEHNEYLYYEVP---------------AAILEQSDEQQQQENQEE 216
           SD SSSYMH HGRGRGEHNEYLYY+VP               AA+ EQSDEQQQQEN EE
Sbjct: 923 SDPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEE 982

The following BLAST results are available for this feature:

BLAST of MELO3C021924 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051227.1	6.5e-95	81.43	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0067080.1	1.8e-89	73.23	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0036767.1	7.7e-88	72.44	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYJ95836.1	7.7e-88	72.44	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
XP_008449513.1	3.6e-85	71.49	PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X...	[more]

BLAST of MELO3C021924 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C021924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9Y2	3.1e-95	81.43	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7VIP6	8.9e-90	73.23	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	3.7e-88	72.44	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	3.7e-88	72.44	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3DUI1	1.7e-85	71.20	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of MELO3C021924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021924.1	MELO3C021924.1	mRNA