MELO3C020729.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C020729.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Cysteine synthase
Location	chr08: 9544641 .. 9544949 (-)
RNA-Seq Expression	MELO3C020729.jh1
Synteny	MELO3C020729.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGATACAAAGTCTACAATAGCTAAAGATGTTACTGAAGTGAGCCATTGACCTTCCTCCCTCTCTTTTTCCTCAATTGAATTTCAAGGATTGACTTAGCTTATTATCAAGAACTTTTGAATTTCATTACATTCATTTTTCATATATTAAAATTTTCAGCTAATTGAGAATACACCACTTGTATATCTCAACCGTGCTATTAATGGTTGCGTGGCTCGGGTAGCTGCCAAGTTGGATATGATGGAGCCTTGCTCTAGTGTCAAAGATAGGTACTTTTTATTTTTAATTATAGTTTTTTTAAAATAA

mRNA sequence

ATGGTTGATACAAAGTCTACAATAGCTAAAGATGTTACTGAACTAATTGAGAATACACCACTTGTATATCTCAACCGTGCTATTAATGGTTGCGTGGCTCGGGTAGCTGCCAAGTTGGATATGATGGAGCCTTGCTCTAGTGTCAAAGATAGGTACTTTTTATTTTTAATTATAGTTTTTTTAAAATAA

Coding sequence (CDS)

ATGGTTGATACAAAGTCTACAATAGCTAAAGATGTTACTGAACTAATTGAGAATACACCACTTGTATATCTCAACCGTGCTATTAATGGTTGCGTGGCTCGGGTAGCTGCCAAGTTGGATATGATGGAGCCTTGCTCTAGTGTCAAAGATAGGTACTTTTTATTTTTAATTATAGTTTTTTTAAAATAA

Protein sequence

MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDRYFLFLIIVFLK

Homology

[Close]

BLAST of MELO3C020729.jh1 vs. NCBI nr
Match: XP_008455731.1 (PREDICTED: cysteine synthase isoform X2 [Cucumis melo] >XP_008455734.1 PREDICTED: cysteine synthase isoform X2 [Cucumis melo] >ADN33908.1 cysteine synthase [Cucumis melo subsp. melo])

HSP 1 Score: 94.7 bits (234), Expect = 2.28e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVDTKSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. NCBI nr
Match: XP_008455725.2 (PREDICTED: cysteine synthase isoform X1 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 2.93e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVDTKSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 21 MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 71

[Close]

BLAST of MELO3C020729.jh1 vs. NCBI nr
Match: XP_038890826.1 (cysteine synthase [Benincasa hispida] >XP_038890827.1 cysteine synthase [Benincasa hispida] >XP_038890828.1 cysteine synthase [Benincasa hispida])

HSP 1 Score: 92.8 bits (229), Expect = 1.21e-20
Identity = 45/51 (88.24%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVD KSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. NCBI nr
Match: Q43317.1 (RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=Beta-PA/CSase; AltName: Full=Beta-pyrazolylalanine synthase; AltName: Full=L-mimosine synthase; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase [Citrullus lanatus] >BAA05965.1 cysteine synthase [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 91.3 bits (225), Expect = 4.60e-20
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          M D KSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. NCBI nr
Match: XP_023538275.1 (cysteine synthase-like [Cucurbita pepo subsp. pepo] >XP_023538276.1 cysteine synthase-like [Cucurbita pepo subsp. pepo] >XP_023538277.1 cysteine synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 89.0 bits (219), Expect = 3.39e-19
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVD KS+IAKDVTELI  TPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDAKSSIAKDVTELIGKTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy Swiss-Prot
Match: Q43317 (Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-18
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          M D KSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy Swiss-Prot
Match: O81154 (Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.7e-14
Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          M   K  IAKDVTELI NTPLVYLN  ++GCVARVAAKL+ MEPCSSVKDR
Sbjct: 1  MAGEKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy Swiss-Prot
Match: Q9XEA6 (Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS1 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 7  TIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          TIAKDVTELI NTPLVYLNR  +GCV RVAAKL+ MEPCSSVKDR
Sbjct: 4  TIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy Swiss-Prot
Match: P47998 (Cysteine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=OASA1 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 3.7e-14
Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 6  STIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          S IAKDVTELI NTPLVYLN    GCV RVAAKL+MMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy Swiss-Prot
Match: O23733 (Cysteine synthase OS=Brassica juncea OX=3707 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.7e-14
Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 6  STIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          S IAKDVTELI NTPLVYLN    GCV RVAAKL+MMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C157 (Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.10e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVDTKSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy TrEMBL
Match: E5GBR6 (Cysteine synthase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.10e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVDTKSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C1N8 (Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.42e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVDTKSTIAKDVTELI NTPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 21 MVDTKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 71

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HPW0 (Cysteine synthase OS=Cucurbita maxima OX=3661 GN=LOC111465603 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.64e-19
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVD KS+IAKDVTELI  TPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDAKSSIAKDVTELIGKTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FB21 (Cysteine synthase OS=Cucurbita moschata OX=3662 GN=LOC111444010 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.64e-19
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MVDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 51
          MVD KS+IAKDVTELI  TPLVYLNR ++GCVARVAAKL+MMEPCSSVKDR
Sbjct: 1  MVDAKSSIAKDVTELIGKTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDR 51

[Close]

BLAST of MELO3C020729.jh1 vs. TAIR 10
Match: AT4G14880.1 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-15
Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 6  STIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          S IAKDVTELI NTPLVYLN    GCV RVAAKL+MMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. TAIR 10
Match: AT4G14880.2 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-15
Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 6  STIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          S IAKDVTELI NTPLVYLN    GCV RVAAKL+MMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. TAIR 10
Match: AT4G14880.3 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-15
Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 6  STIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          S IAKDVTELI NTPLVYLN    GCV RVAAKL+MMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. TAIR 10
Match: AT4G14880.4 (O-acetylserine (thiol) lyase (OAS-TL) isoform A1 )

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-15
Identity = 38/46 (82.61%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 6  STIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          S IAKDVTELI NTPLVYLN    GCV RVAAKL+MMEPCSSVKDR
Sbjct: 3  SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDR 48

[Close]

BLAST of MELO3C020729.jh1 vs. TAIR 10
Match: AT5G28020.1 (cysteine synthase D2 )

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-14
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 2  VDTKSTIAKDVTELIENTPLVYLNRAINGCVARVAAKLDMMEPCSSVKDR 52
          ++ +  I  D+TELI NTP+VYLN  ++GCVAR+AAKL+MMEPCSSVKDR
Sbjct: 1  MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDR 50

The following BLAST results are available for this feature:

BLAST of MELO3C020729.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455731.1	2.28e-21	90.20	PREDICTED: cysteine synthase isoform X2 [Cucumis melo] >XP_008455734.1 PREDICTED...	[more]
XP_008455725.2	2.93e-21	90.20	PREDICTED: cysteine synthase isoform X1 [Cucumis melo]	[more]
XP_038890826.1	1.21e-20	88.24	cysteine synthase [Benincasa hispida] >XP_038890827.1 cysteine synthase [Beninca...	[more]
Q43317.1	4.60e-20	86.27	RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=Beta-PA/CSase; AltNa...	[more]
XP_023538275.1	3.39e-19	84.31	cysteine synthase-like [Cucurbita pepo subsp. pepo] >XP_023538276.1 cysteine syn...	[more]

BLAST of MELO3C020729.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43317	3.2e-18	86.27	Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1	[more]
O81154	1.7e-14	76.47	Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9XEA6	2.2e-14	84.44	Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS1 PE=2 SV=2	[more]
P47998	3.7e-14	82.61	Cysteine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=OASA1 PE=1 SV=2	[more]
O23733	3.7e-14	82.61	Cysteine synthase OS=Brassica juncea OX=3707 PE=2 SV=1	[more]

BLAST of MELO3C020729.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C157	1.10e-21	90.20	Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1	[more]
E5GBR6	1.10e-21	90.20	Cysteine synthase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3C1N8	1.42e-21	90.20	Cysteine synthase OS=Cucumis melo OX=3656 GN=LOC103495826 PE=3 SV=1	[more]
A0A6J1HPW0	1.64e-19	84.31	Cysteine synthase OS=Cucurbita maxima OX=3661 GN=LOC111465603 PE=3 SV=1	[more]
A0A6J1FB21	1.64e-19	84.31	Cysteine synthase OS=Cucurbita moschata OX=3662 GN=LOC111444010 PE=3 SV=1	[more]

BLAST of MELO3C020729.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14880.1	2.6e-15	82.61	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT4G14880.2	2.6e-15	82.61	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT4G14880.3	2.6e-15	82.61	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT4G14880.4	2.6e-15	82.61	O-acetylserine (thiol) lyase (OAS-TL) isoform A1	[more]
AT5G28020.1	1.7e-14	66.00	cysteine synthase D2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 12..42 e-value: 6.6E-12 score: 47.2
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 43..57 e-value: 6.6E-12 score: 47.2
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 8..59
None	No IPR available	PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	coord: 1..53
None	No IPR available	PANTHER	PTHR10314:SF97	CYSTEINE SYNTHASE	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020729.jh1.t1	MELO3C020729.jh1.t1	mRNA