MELO3C020706 (gene) Melon (DHL92) v4

Overview


Name	MELO3C020706
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Histone H2A
Location	chr12: 2919452 .. 2920951 (+)
RNA-Seq Expression	MELO3C020706
Synteny	MELO3C020706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCCACATCCGTCGATTGAACTATATCGTACGGTCAAAACGTACCACCCATTTTCTAAATCCTTCTCCTTCCCCAAATCCCCGTCGTTTTTATGCGGCTCTATAAAATCATTTCCGCAACTTCAATCCTTCTCATCGTCATATCCACTCACCCAATTCCATTTTCTTCTCACACCCTTTTGATTTTTACGGCCACCCCACTCTAGTTCCGATGGAAACCGGCGGCAAGTTGAAGAAGGGAGCTGGTGGAAGAAAGGGCGGCGGCCCGAAGAAGAAGCCGGTTTCGCGTTCCGTTAAGGCCGGCCTCCAGTTCCCCGTTGGTAGGATCGGTCGATACTTGAAGAATGGCCGATATGCTCGTCGCGTTGGTACTGGAGCACCTGTCTACTTGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTAACTACTGAACCCCTTTTACTCTATTAGATCTGTGTTTCTTTCTGTTTGCTTTAGACTTGGGGTATTATGTCTTTTAGTTAGGGATTCGAGTTTAATTCAAAGAACTGATGATTTGAAGTGAAAGATCTTTAAAATTTGAGCTGGGATTTGTAATTCTTGCTTTTCGATGTGTGATTGCTGTAGTTTGGGACTGAATTATTGTTAGGAATGTTGAATTCAAGTTGATTCCGTTGCTTGATTGGGTTGGGATGATTGATTAACATGATTGAATCCTAGGGTTTATGATCTAGAATTTCAAATCATTTTCGAATTGCATGATGTGGATCTCTAATTTGACAAGTTGGGGGAAAATTAGGTGTTGGAGTTGGCTGGAAATGCCGCCAGAGACAACAAGAAGAACAGAATAATTCCTAGACATGTATTGTTGGCCATAAGGAATGATGAAGAACTTGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTTTTGCCAAAGAAAAGTGAGAAAGCAACTACTAAAGAACCAAAATCTCCATCAAAGGCTCCTAAAGCAACTAAATCTCCAAAGAAGGCTTAGGTTTTTTCTTTTTTACTTTTTTTTTTCTCCATCTGAAAAAAACTTTGACTTGTTCTTTGCCCATTTGTATGTAGTTTGTTGGCTTTTTAGGATCTTCTTCTGTGTTGTTTATCAAATGTAAGCTCCAAAACTGATGAATTTGATGAATTTGGAGACTCTGTATCACTCCTCATCATCTTGATGATTAAACTTTGTATTGGTTATGATTTGTTTAGCCCATCAATTTGCTTTCTTCAATCTGCTAATCTTTGTTTGGTTTAATGGATGAGGATGGAAGAATGGAGATATTTGGTCAATTGACCTCCTAAATTTAAATACTAGAATAGCTCAAATCACTTTTGTGTTTTTAGTATAGTTTTAAATGAATAATGTGTGGAAAAGTTCGAAATTAATGTGAATTGATTTTTGAGTGATTAATTTTATCAAAAGATTTATTTGATACTCACATGTATAAGTGAATGAGGAGAT

mRNA sequence

TTATCCACATCCGTCGATTGAACTATATCGTACGGTCAAAACGTACCACCCATTTTCTAAATCCTTCTCCTTCCCCAAATCCCCGTCGTTTTTATGCGGCTCTATAAAATCATTTCCGCAACTTCAATCCTTCTCATCGTCATATCCACTCACCCAATTCCATTTTCTTCTCACACCCTTTTGATTTTTACGGCCACCCCACTCTAGTTCCGATGGAAACCGGCGGCAAGTTGAAGAAGGGAGCTGGTGGAAGAAAGGGCGGCGGCCCGAAGAAGAAGCCGGTTTCGCGTTCCGTTAAGGCCGGCCTCCAGTTCCCCGTTGGTAGGATCGGTCGATACTTGAAGAATGGCCGATATGCTCGTCGCGTTGGTACTGGAGCACCTGTCTACTTGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTGTTGGAGTTGGCTGGAAATGCCGCCAGAGACAACAAGAAGAACAGAATAATTCCTAGACATGTATTGTTGGCCATAAGGAATGATGAAGAACTTGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTTTTGCCAAAGAAAAGTGAGAAAGCAACTACTAAAGAACCAAAATCTCCATCAAAGGCTCCTAAAGCAACTAAATCTCCAAAGAAGGCTTAGGTTTTTTCTTTTTTACTTTTTTTTTTCTCCATCTGAAAAAAACTTTGACTTGTTCTTTGCCCATTTGTATGTAGTTTGTTGGCTTTTTAGGATCTTCTTCTGTGTTGTTTATCAAATGTAAGCTCCAAAACTGATGAATTTGATGAATTTGGAGACTCTGTATCACTCCTCATCATCTTGATGATTAAACTTTGTATTGGTTATGATTTGTTTAGCCCATCAATTTGCTTTCTTCAATCTGCTAATCTTTGTTTGGTTTAATGGATGAGGATGGAAGAATGGAGATATTTGGTCAATTGACCTCCTAAATTTAAATACTAGAATAGCTCAAATCACTTTTGTGTTTTTAGTATAGTTTTAAATGAATAATGTGTGGAAAAGTTCGAAATTAATGTGAATTGATTTTTGAGTGATTAATTTTATCAAAAGATTTATTTGATACTCACATGTATAAGTGAATGAGGAGAT

Coding sequence (CDS)

ATGGAAACCGGCGGCAAGTTGAAGAAGGGAGCTGGTGGAAGAAAGGGCGGCGGCCCGAAGAAGAAGCCGGTTTCGCGTTCCGTTAAGGCCGGCCTCCAGTTCCCCGTTGGTAGGATCGGTCGATACTTGAAGAATGGCCGATATGCTCGTCGCGTTGGTACTGGAGCACCTGTCTACTTGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTGTTGGAGTTGGCTGGAAATGCCGCCAGAGACAACAAGAAGAACAGAATAATTCCTAGACATGTATTGTTGGCCATAAGGAATGATGAAGAACTTGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTTTTGCCAAAGAAAAGTGAGAAAGCAACTACTAAAGAACCAAAATCTCCATCAAAGGCTCCTAAAGCAACTAAATCTCCAAAGAAGGCTTAG

Protein sequence

METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA

Homology

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BLAST of MELO3C020706 vs. ExPASy Swiss-Prot
Match: Q9M531 (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.3e-67
Identity = 139/156 (89.10%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M+TG KLKKGAG RKGGGPKKKPVSRSVKAGLQFPVGRIGR+LK GRYA+RVG+GAPVYL
Sbjct: 1   MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEK---ATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKK+EK   A TKEPKSP+   KATKSPKKA
Sbjct: 121 NPVLLPKKAEKAAAAATKEPKSPA---KATKSPKKA 153

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BLAST of MELO3C020706 vs. ExPASy Swiss-Prot
Match: Q2HU65 (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.6e-64
Identity = 132/155 (85.16%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M+   K KKGAGGRKGGGP+KK V+RS++AGLQFPVGRIGRYLK GRYA+RVGTGAPVYL
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATT--KEPKSPSKAPKATKSPKKA 154
           NPVLLPKK+E++ T  KEPKSP   PKA KSPKKA
Sbjct: 121 NPVLLPKKTERSNTVSKEPKSPK--PKAGKSPKKA 153

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BLAST of MELO3C020706 vs. ExPASy Swiss-Prot
Match: Q9LZ46 (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-63
Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSEKA--TTKEPKSPSKAPKATKSPKKA 154
           INP+LLPKKSEKA  TTK PKSPS   KATKSPKK+
Sbjct: 121 INPILLPKKSEKAASTTKTPKSPS---KATKSPKKS 153

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BLAST of MELO3C020706 vs. ExPASy Swiss-Prot
Match: A2WQG7 (Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.9e-62
Identity = 135/153 (88.24%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 4   GGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAV 63
           GGKLKKGA GRK GGP+KK VSRSVKAGLQFPVGRIGRYLK GRYA+R+GTGAPVYLAAV
Sbjct: 9   GGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 123
           LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV
Sbjct: 69  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 128

Query: 124 LLPKK-SEKATT--KEPKSPSKAPKATKSPKKA 154
           LLPKK +EKA    KE KSP KA  A KSPKKA
Sbjct: 129 LLPKKTAEKAAAAGKEAKSPKKA--AGKSPKKA 159

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BLAST of MELO3C020706 vs. ExPASy Swiss-Prot
Match: Q94E96 (Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.9e-62
Identity = 135/153 (88.24%), Postives = 139/153 (90.85%), Query Frame = 0


Query: 4   GGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAV 63
           GGKLKKGA GRK GGP+KK VSRSVKAGLQFPVGRIGRYLK GRYA+R+GTGAPVYLAAV
Sbjct: 9   GGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 123
           LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV
Sbjct: 69  LEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 128

Query: 124 LLPKK-SEKATT--KEPKSPSKAPKATKSPKKA 154
           LLPKK +EKA    KE KSP KA  A KSPKKA
Sbjct: 129 LLPKKTAEKAAAAGKEAKSPKKA--AGKSPKKA 159

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BLAST of MELO3C020706 vs. NCBI nr
Match: XP_004149043.1 (histone H2A [Cucumis sativus] >XP_008457544.1 PREDICTED: histone H2A [Cucumis melo] >KAA0033912.1 Histone core [Cucumis melo var. makuwa] >KGN65668.1 hypothetical protein Csa_019600 [Cucumis sativus] >TYK01294.1 Histone core [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 4.4e-74
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

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BLAST of MELO3C020706 vs. NCBI nr
Match: XP_022134450.1 (histone H2A-like [Momordica charantia])

HSP 1 Score: 281.6 bits (719), Expect = 4.1e-72
Identity = 150/153 (98.04%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKA TKEPKSPSK  KATKSPKKA
Sbjct: 121 NPVLLPKKSEKAVTKEPKSPSKVTKATKSPKKA 153

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BLAST of MELO3C020706 vs. NCBI nr
Match: XP_038895656.1 (histone H2A [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71
Identity = 148/153 (96.73%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKA  KEPKSPSKA KATKSPKKA
Sbjct: 121 NPVLLPKKSEKAAAKEPKSPSKASKATKSPKKA 153

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BLAST of MELO3C020706 vs. NCBI nr
Match: XP_022964993.1 (histone H2A [Cucurbita moschata] >XP_022970475.1 histone H2A [Cucurbita maxima] >XP_023520345.1 histone H2A [Cucurbita pepo subsp. pepo] >KAG6583464.1 hypothetical protein SDJN03_19396, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019222.1 hypothetical protein SDJN02_18180 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.8 bits (704), Expect = 2.3e-70
Identity = 147/153 (96.08%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M++  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   MDSSAKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKA TKEPKSPSKA KATKSPKKA
Sbjct: 121 NPVLLPKKSEKAATKEPKSPSKASKATKSPKKA 153

[Close]

BLAST of MELO3C020706 vs. NCBI nr
Match: XP_022997818.1 (histone H2A-like [Cucurbita maxima] >XP_023523186.1 histone H2A-like [Cucurbita pepo subsp. pepo] >KAG6607207.1 hypothetical protein SDJN03_00549, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036893.1 hypothetical protein SDJN02_00513 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 144/153 (94.12%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M+  GKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+
Sbjct: 1   MDASGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYM 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKA +KEPKSPSK PK  KSPKKA
Sbjct: 121 NPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA 153

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BLAST of MELO3C020706 vs. ExPASy TrEMBL
Match: A0A5D3BQ44 (Histone H2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00860 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

[Close]

BLAST of MELO3C020706 vs. ExPASy TrEMBL
Match: A0A0A0LV77 (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G481210 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

[Close]

BLAST of MELO3C020706 vs. ExPASy TrEMBL
Match: A0A1S3C5R1 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103497210 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

[Close]

BLAST of MELO3C020706 vs. ExPASy TrEMBL
Match: A0A6J1BYB9 (Histone H2A OS=Momordica charantia OX=3673 GN=LOC111006694 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.0e-72
Identity = 150/153 (98.04%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKA TKEPKSPSK  KATKSPKKA
Sbjct: 121 NPVLLPKKSEKAVTKEPKSPSKVTKATKSPKKA 153

[Close]

BLAST of MELO3C020706 vs. ExPASy TrEMBL
Match: A0A6J1I2Z0 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111469444 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 147/153 (96.08%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M++  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   MDSSAKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120
           AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61  AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNI 120

Query: 121 NPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 154
           NPVLLPKKSEKA TKEPKSPSKA KATKSPKKA
Sbjct: 121 NPVLLPKKSEKAATKEPKSPSKASKATKSPKKA 153

[Close]

BLAST of MELO3C020706 vs. TAIR 10
Match: AT5G02560.1 (histone H2A 12 )

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-64
Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPN 120
           LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+RNDEELG LL GVTIAHGGVLPN
Sbjct: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120

Query: 121 INPVLLPKKSEKA--TTKEPKSPSKAPKATKSPKKA 154
           INP+LLPKKSEKA  TTK PKSPS   KATKSPKK+
Sbjct: 121 INPILLPKKSEKAASTTKTPKSPS---KATKSPKKS 153

[Close]

BLAST of MELO3C020706 vs. TAIR 10
Match: AT5G02560.2 (histone H2A 12 )

HSP 1 Score: 229.9 bits (585), Expect = 1.3e-60
Identity = 134/180 (74.44%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAE------------------------VLELAGNAARDNKKNRIIPRHVLLA 120
           LAAVLEYLAAE                        VLELAGNAARDNKKNRIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 IRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA--TTKEPKSPSKAPKATKSPKKA 154
           +RNDEELG LL GVTIAHGGVLPNINP+LLPKKSEKA  TTK PKSPS   KATKSPKK+
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPS---KATKSPKKS 177

[Close]

BLAST of MELO3C020706 vs. TAIR 10
Match: AT5G59870.1 (histone H2A 6 )

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-53
Identity = 115/148 (77.70%), Postives = 128/148 (86.49%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           ME+ GK+KK  GGRK  G PK K VS+S+KAGLQFPVGRI R+LK GRYA+R+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPN 120
           +AAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLAIRNDEELGKLL+GVTIAHGGVLPN
Sbjct: 61  MAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPN 120

Query: 121 INPVLLPKKS--EKATTKEPKSPSKAPK 146
           IN VLLPKKS  + A  K  KSP K+PK
Sbjct: 121 INSVLLPKKSATKPAEEKATKSPVKSPK 148

[Close]

BLAST of MELO3C020706 vs. TAIR 10
Match: AT5G27670.1 (histone H2A 7 )

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-51
Identity = 114/148 (77.03%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 6   KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLE 65
           K  +GAGGRK GG +KK VS+SVKAGLQFPVGRI RYLK GRYA R G+GAPVYLAAVLE
Sbjct: 9   KPTRGAGGRK-GGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLE 68

Query: 66  YLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLL 125
           YLAAEVLELAGNAARDNKKNRI PRH+ LAIRNDEELG+LL GVTIA GGVLPNINPVLL
Sbjct: 69  YLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLL 128

Query: 126 PKKSEKATTKEPKSPSKAPKATKSPKKA 154
           PKKS  ++++  K+      ATKSPKKA
Sbjct: 129 PKKSTASSSQAEKA-----SATKSPKKA 150

[Close]

BLAST of MELO3C020706 vs. TAIR 10
Match: AT3G20670.1 (histone H2A 13 )

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-44
Identity = 91/120 (75.83%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 10  GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLEYLAA 69
           G G   G G  KK  SRS KAGLQFPVGRI R+LKNG+YA RVG GAPVYLAAVLEYLAA
Sbjct: 3   GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAA 62

Query: 70  EVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 129
           EVLELAGNAARDNKK RI+PRH+ LA+RNDEEL KLL  VTIA+GGV+PNI+ +LLPKK+
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKA 122

The following BLAST results are available for this feature:

BLAST of MELO3C020706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M531	9.3e-67	89.10	Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
Q2HU65	9.6e-64	85.16	Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 P...	[more]
Q9LZ46	1.6e-63	85.90	Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1	[more]
A2WQG7	6.9e-62	88.24	Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3...	[more]
Q94E96	6.9e-62	88.24	Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 ...	[more]

BLAST of MELO3C020706 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149043.1	4.4e-74	100.00	histone H2A [Cucumis sativus] >XP_008457544.1 PREDICTED: histone H2A [Cucumis me...	[more]
XP_022134450.1	4.1e-72	98.04	histone H2A-like [Momordica charantia]	[more]
XP_038895656.1	3.5e-71	96.73	histone H2A [Benincasa hispida]	[more]
XP_022964993.1	2.3e-70	96.08	histone H2A [Cucurbita moschata] >XP_022970475.1 histone H2A [Cucurbita maxima] ...	[more]
XP_022997818.1	1.1e-69	94.12	histone H2A-like [Cucurbita maxima] >XP_023523186.1 histone H2A-like [Cucurbita ...	[more]

BLAST of MELO3C020706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQ44	2.1e-74	100.00	Histone H2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00860 PE=...	[more]
A0A0A0LV77	2.1e-74	100.00	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G481210 PE=3 SV=1	[more]
A0A1S3C5R1	2.1e-74	100.00	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103497210 PE=3 SV=1	[more]
A0A6J1BYB9	2.0e-72	98.04	Histone H2A OS=Momordica charantia OX=3673 GN=LOC111006694 PE=3 SV=1	[more]
A0A6J1I2Z0	1.1e-70	96.08	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111469444 PE=3 SV=1	[more]

BLAST of MELO3C020706 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02560.1	1.2e-64	85.90	histone H2A 12	[more]
AT5G02560.2	1.3e-60	74.44	histone H2A 12	[more]
AT5G59870.1	2.7e-53	77.70	histone H2A 6	[more]
AT5G27670.1	1.1e-51	77.03	histone H2A 7	[more]
AT3G20670.1	2.3e-44	75.83	histone H2A 13	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 80..94 score: 73.78 coord: 66..79 score: 89.46 coord: 108..126 score: 75.79 coord: 22..44 score: 69.23 coord: 51..66 score: 86.43
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 11..131 e-value: 8.1E-80 score: 281.2
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 23..128 e-value: 9.28859E-66 score: 194.091
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 100..133 e-value: 1.2E-18 score: 66.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 10..139 e-value: 9.8E-64 score: 215.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 25..128
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 20..97 e-value: 9.3E-12 score: 45.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..153
None	No IPR available	PANTHER	PTHR23430:SF304	HISTONE H2A	coord: 7..145
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 7..145
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 30..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020706.1	MELO3C020706.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity