MELO3C020262.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGCTTCCTCTTCTTTGGAAATAACTCAACAACAATTAAAAGGGCATCGACAACAGATTGTAGCAATTGAGGCTACCATAGGGACGACATCCAACACTGTATCGATGTATTCTGAGAATCTGGTAACCTCATTCTCTACTTTATCCTCTTCCTATGTGAATGCTAGTCCAACCACACTTGGAGCTATTGTCCAGTCAGGTATACCTAAGCCCTTTAGTCTCATTAGTTTTGAAG ATGCAAGCTTCCTCTTCTTTGGAAATAACTCAACAACAATTAAAAGGGCATCGACAACAGATTGTAGCAATTGAGGCTACCATAGGGACGACATCCAACACTGTATCGATGTATTCTGAGAATCTGGTAACCTCATTCTCTACTTTATCCTCTTCCTATGTGAATGCTAGTCCAACCACACTTGGAGCTATTGTCCAGTCAGGTATACCTAAGCCCTTTAGTCTCATTAGTTTTGAAG ATGCAAGCTTCCTCTTCTTTGGAAATAACTCAACAACAATTAAAAGGGCATCGACAACAGATTGTAGCAATTGAGGCTACCATAGGGACGACATCCAACACTGTATCGATGTATTCTGAGAATCTGGTAACCTCATTCTCTACTTTATCCTCTTCCTATGTGAATGCTAGTCCAACCACACTTGGAGCTATTGTCCAGTCAGGTATACCTAAGCCCTTTAGTCTCATTAGTTTTGAA MQASSSLEITQQQLKGHRQQIVAIEATIGTTSNTVSMYSENLVTSFSTLSSSYVNASPTTLGAIVQSGIPKPFSLISFE Homology
BLAST of MELO3C020262.jh1 vs. NCBI nr
Match: KAA0041480.1 (kirola-like [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 2.38e-21 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. NCBI nr
Match: TYK24354.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 1.66e-20 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. NCBI nr
Match: KAA0053148.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK01552.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 3.03e-18 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. NCBI nr
Match: KAA0050981.1 (kirola-like [Cucumis melo var. makuwa] >TYK10327.1 kirola-like [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 9.24e-17 Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. NCBI nr
Match: KAA0065437.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 2.08e-16 Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TDW1 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00630 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.15e-21 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DL79 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001340 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 8.02e-21 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BRY6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001230 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.47e-18 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CEE0 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004830 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.47e-17 Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of MELO3C020262.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VEC5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001180 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.01e-16 Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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