MELO3C020257 (gene) Melon (DHL92) v4

Overview
NameMELO3C020257
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 14725544 .. 14725915 (+)
RNA-Seq ExpressionMELO3C020257
SyntenyMELO3C020257
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTCGTAGTTTCGACTATAAGTGCAAGTCATTGCAAGGCTGCTTCTCTGAATCCTAACTTAGGCAATGAGACTGCCACAACGGCTACATCATCGACACGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGAAGACATTGAAAACTCAGCATTTCCAAGCTTATATAGACCAATTAGAGCCGGTATTCGAACTGGAAATCCGAAACAGTCGGTATGTGATCGGGACTTCGTGGAAAGATATGGCGACATCAGGTGTCTCGGCACGCGGTCGTCCCAACCGAAAGAAAAATGTGGCCTATATAAGCGCAGCTGTTAA

mRNA sequence

ATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTCGTAGTTTCGACTATAAGTGCAAGTCATTGCAAGGCTGCTTCTCTGAATCCTAACTTAGGCAATGAGACTGCCACAACGGCTACATCATCGACACGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGAAGACATTGAAAACTCAGCATTTCCAAGCTTATATAGACCAATTAGAGCCGGTATTCGAACTGGAAATCCGAAACAGTCGGTATGTGATCGGGACTTCGTGGAAAGATATGGCGACATCAGGTGTCTCGGCACGCGGTCGTCCCAACCGAAAGAAAAATGTGGCCTATATAAGCGCAGCTGTTAA

Coding sequence (CDS)

ATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTCGTAGTTTCGACTATAAGTGCAAGTCATTGCAAGGCTGCTTCTCTGAATCCTAACTTAGGCAATGAGACTGCCACAACGGCTACATCATCGACACGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGAAGACATTGAAAACTCAGCATTTCCAAGCTTATATAGACCAATTAGAGCCGGTATTCGAACTGGAAATCCGAAACAGTCGGTATGTGATCGGGACTTCGTGGAAAGATATGGCGACATCAGGTGTCTCGGCACGCGGTCGTCCCAACCGAAAGAAAAATGTGGCCTATATAAGCGCAGCTGTTAA

Protein sequence

MATPTTTTMVAVAIIVVVSTISASHCKAASLNPNLGNETATTATSSTRCNSLDKECLIGVEDEDIENSAFPSLYRPIRAGIRTGNPKQSVCDRDFVERYGDIRCLGTRSSQPKEKCGLYKRSC
Homology
BLAST of MELO3C020257 vs. NCBI nr
Match: KGN57814.1 (hypothetical protein Csa_009509 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 4.0e-33
Identity = 84/123 (68.29%), Postives = 94/123 (76.42%), Query Frame = 0

Query: 1   MATPTTTTMVAVAIIVVVSTISASHCKAASLNPNLGNETATTATSSTRCNSLDKECLIGV 60
           MATPTTTTMVAVAIIVVVSTI ASHCKAASLN NLGNET T ATSST CNSLDKECLIGV
Sbjct: 11  MATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGV 70

Query: 61  EDEDIENSAFPSLYRPIRAGIRTGNPKQSVCDRDFVERYGDIRCLGTRSSQPKEKCGLYK 120
           ED++IE SAFPSLY      +RT N +++VC R  V RY + RCL  +   P +KC  + 
Sbjct: 71  EDDNIETSAFPSLYNT----VRTANGQKAVCGR--VGRYDNQRCLPQKRPNPIQKCSTFT 127

Query: 121 RSC 124
           RSC
Sbjct: 131 RSC 127

BLAST of MELO3C020257 vs. NCBI nr
Match: KGN53789.1 (hypothetical protein Csa_015152 [Cucumis sativus])

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-04
Identity = 46/125 (36.80%), Postives = 66/125 (52.80%), Query Frame = 0

Query: 1   MATPTTTTMVAVAIIVVVSTISASHCKAASLNP-NLGNETATTATSSTRCNSLDKECLIG 60
           MAT    +  A+ I+++  TIS S+C AAS+ P N  NET T  TS+  CN L ++C   
Sbjct: 1   MATAAAPSTTAMTILILTLTIS-SYCNAASVLPSNFANETITAMTSTIFCNGLLQQC-FN 60

Query: 61  VEDEDIENSAFPSLYRPIRAGIRTGNPKQSVCDRDFVERYGDIRCLGTRSS-QPKEKCGL 120
           VE+  I   + P          RTG+   SVC R +   Y  I+C+ T+ S +PK+    
Sbjct: 61  VEENGIHYYSTP----------RTGSRASSVCGRFYNGSY--IKCITTQGSPKPKDCRSA 111

Query: 121 YKRSC 124
           Y R+C
Sbjct: 121 YDRTC 111

BLAST of MELO3C020257 vs. ExPASy TrEMBL
Match: A0A0A0LA12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G316270 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.9e-33
Identity = 84/123 (68.29%), Postives = 94/123 (76.42%), Query Frame = 0

Query: 1   MATPTTTTMVAVAIIVVVSTISASHCKAASLNPNLGNETATTATSSTRCNSLDKECLIGV 60
           MATPTTTTMVAVAIIVVVSTI ASHCKAASLN NLGNET T ATSST CNSLDKECLIGV
Sbjct: 11  MATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGV 70

Query: 61  EDEDIENSAFPSLYRPIRAGIRTGNPKQSVCDRDFVERYGDIRCLGTRSSQPKEKCGLYK 120
           ED++IE SAFPSLY      +RT N +++VC R  V RY + RCL  +   P +KC  + 
Sbjct: 71  EDDNIETSAFPSLYNT----VRTANGQKAVCGR--VGRYDNQRCLPQKRPNPIQKCSTFT 127

Query: 121 RSC 124
           RSC
Sbjct: 131 RSC 127

BLAST of MELO3C020257 vs. ExPASy TrEMBL
Match: A0A0A0KY59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04
Identity = 46/125 (36.80%), Postives = 66/125 (52.80%), Query Frame = 0

Query: 1   MATPTTTTMVAVAIIVVVSTISASHCKAASLNP-NLGNETATTATSSTRCNSLDKECLIG 60
           MAT    +  A+ I+++  TIS S+C AAS+ P N  NET T  TS+  CN L ++C   
Sbjct: 1   MATAAAPSTTAMTILILTLTIS-SYCNAASVLPSNFANETITAMTSTIFCNGLLQQC-FN 60

Query: 61  VEDEDIENSAFPSLYRPIRAGIRTGNPKQSVCDRDFVERYGDIRCLGTRSS-QPKEKCGL 120
           VE+  I   + P          RTG+   SVC R +   Y  I+C+ T+ S +PK+    
Sbjct: 61  VEENGIHYYSTP----------RTGSRASSVCGRFYNGSY--IKCITTQGSPKPKDCRSA 111

Query: 121 YKRSC 124
           Y R+C
Sbjct: 121 YDRTC 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57814.14.0e-3368.29hypothetical protein Csa_009509 [Cucumis sativus][more]
KGN53789.13.0e-0436.80hypothetical protein Csa_015152 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LA121.9e-3368.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G316270 PE=4 SV=1[more]
A0A0A0KY591.4e-0436.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020257.1MELO3C020257.1mRNA