MELO3C020216 (gene) Melon (DHL92) v4

Overview
NameMELO3C020216
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 15647108 .. 15647294 (-)
RNA-Seq ExpressionMELO3C020216
SyntenyMELO3C020216
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGCACATCAGCAGAATGTTGGCAGATTCGTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCACCGGCGAATGCGACCGGCCCCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAACCGTGAACATCCCT

mRNA sequence

ATGGAGTCGCACATCAGCAGAATGTTGGCAGATTCGTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCACCGGCGAATGCGACCGGCCCCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAACCGTGAACATCCCT

Coding sequence (CDS)

ATGGAGTCGCACATCAGCAGAATGTTGGCAGATTCGTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCACCGGCGAATGCGACCGGCCCCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAACCGTGAACATCCC

Protein sequence

MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHP
Homology
BLAST of MELO3C020216 vs. NCBI nr
Match: XP_011651393.1 (uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical protein Csa_009536 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 3.2e-23
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISRMLAD SQDFETSSTNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NRE
Sbjct: 59  MESHISRMLAD-SQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNRE 118

Query: 61  HP 63
           HP
Sbjct: 119 HP 119

BLAST of MELO3C020216 vs. NCBI nr
Match: KAG6607028.1 (hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036724.1 hypothetical protein SDJN02_00344 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16
Identity = 44/62 (70.97%), Postives = 54/62 (87.10%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           M  HISR+LA+ SQ FETS+T+NAT+ + GECDRPPRYDSCLG+KR+TPPP+NC  +NRE
Sbjct: 43  MSLHISRVLAE-SQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNRE 102

Query: 61  HP 63
           HP
Sbjct: 103 HP 103

BLAST of MELO3C020216 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-14
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA  SQDF+TS TN+A + S G C+RPPRYDSCLG K N PPP+NC T+NR 
Sbjct: 56  MESHISRILA-GSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRN 115

Query: 61  HP 63
           +P
Sbjct: 116 NP 116

BLAST of MELO3C020216 vs. NCBI nr
Match: KGN57781.1 (hypothetical protein Csa_009565 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA SS++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCS YNR 
Sbjct: 58  MESHISRILA-SSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRA 117

Query: 61  HP 63
           +P
Sbjct: 118 NP 118

BLAST of MELO3C020216 vs. NCBI nr
Match: TYK01622.1 (hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 7.9e-14
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA SSQ+F+T+ST +A + S G C RPPRYDSCLG KRN PPP NC TYNR 
Sbjct: 58  MESHISRILA-SSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRA 117

Query: 61  HP 63
           +P
Sbjct: 118 NP 118

BLAST of MELO3C020216 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISRMLAD SQDFETSSTNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NRE
Sbjct: 59  MESHISRMLAD-SQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNRE 118

Query: 61  HP 63
           HP
Sbjct: 119 HP 119

BLAST of MELO3C020216 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.7e-15
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA  SQDF+TS TN+A + S G C+RPPRYDSCLG K N PPP+NC T+NR 
Sbjct: 56  MESHISRILA-GSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRN 115

Query: 61  HP 63
           +P
Sbjct: 116 NP 116

BLAST of MELO3C020216 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA SS++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCS YNR 
Sbjct: 58  MESHISRILA-SSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRA 117

Query: 61  HP 63
           +P
Sbjct: 118 NP 118

BLAST of MELO3C020216 vs. ExPASy TrEMBL
Match: A0A5D3BS53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002320 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-14
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA SSQ+F+T+ST +A + S G C RPPRYDSCLG KRN PPP NC TYNR 
Sbjct: 58  MESHISRILA-SSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRA 117

Query: 61  HP 63
           +P
Sbjct: 118 NP 118

BLAST of MELO3C020216 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.5e-14
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA  SQ+F+TS TN+A + S G C RPPRYDSCLG K N PPP+NC T+NR 
Sbjct: 56  MESHISRILA-GSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRN 115

Query: 61  HP 63
           +P
Sbjct: 116 NP 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011651393.13.2e-2393.55uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical ... [more]
KAG6607028.12.2e-1670.97hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022998105.11.6e-1467.74uncharacterized protein LOC111492854 [Cucurbita maxima][more]
KGN57781.12.1e-1469.35hypothetical protein Csa_009565 [Cucumis sativus][more]
TYK01622.17.9e-1469.35hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7111.6e-2393.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
A0A6J1KBP57.7e-1567.74uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
A0A0A0LCJ41.0e-1469.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
A0A5D3BS533.8e-1469.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1G9276.5e-1466.13uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020216.1MELO3C020216.1mRNA