MELO3C018988 (gene) Melon (DHL92) v4

Overview


Name	MELO3C018988
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein TRANSPARENT TESTA GLABRA 1
Location	chr07: 14645214 .. 14646498 (-)
RNA-Seq Expression	MELO3C018988
Synteny	MELO3C018988

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCAGTCTGTTCCATCGTTCTTCGCTTTTGGAATCATGGAAAACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGATTCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCACTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTGTCTCAATTAAAACTAATCCTTCCCTCTCCTTTGAGCACCCGTACCCACCCACCAAGCTCATGTTTAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCTGGCGACTCTCTACGCCTCTGGAAAGTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCATTAACTTCCTTCGACTGGAATGAAGTTGAGCTTAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTCTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCCTCTGTTTCCGCGGATGGGTCGGTAAGAATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCTCAACCCGATACCCCTTTGCTCAGACTGGCTTGGAACAAACAGGACCTGCGGTACATGGCCACAATTCTGATGGATAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAACTGGAGAGGCATCATTCCAGTGTCAATGCTATTGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCGCTCATTTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATGTGAAATTAACCAGTTGCAATGGTCCGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGAGGACTCGGAACGTTTTCCACTGTACCTCTACCTACAGTGCATCTACTGTAATATCCTTACATTTTGTTTTTCAATCATGTTCTATAAGCCTGATGTCTTCCTATAAGTTTAGTTTTAGGTTAGTGCTAAGTTGTTACTGGGTTAATATAAATGTTGGTGCCTTCTTCTGGCTAACAGACAACACATTCTATGTTAACTCGCTTGAATTCTTGAAATTCAATCAAGCTTAAGTAGGCCACTTTCTT

mRNA sequence

TCTCTCAGTCTGTTCCATCGTTCTTCGCTTTTGGAATCATGGAAAACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGATTCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCACTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTGTCTCAATTAAAACTAATCCTTCCCTCTCCTTTGAGCACCCGTACCCACCCACCAAGCTCATGTTTAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCTGGCGACTCTCTACGCCTCTGGAAAGTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCATTAACTTCCTTCGACTGGAATGAAGTTGAGCTTAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTCTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCCTCTGTTTCCGCGGATGGGTCGGTAAGAATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCTCAACCCGATACCCCTTTGCTCAGACTGGCTTGGAACAAACAGGACCTGCGGTACATGGCCACAATTCTGATGGATAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAACTGGAGAGGCATCATTCCAGTGTCAATGCTATTGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCGCTCATTTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATGTGAAATTAACCAGTTGCAATGGTCCGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGAGGACTCGGAACGTTTTCCACTGTACCTCTACCTACAGTGCATCTACTGTAATATCCTTACATTTTGTTTTTCAATCATGTTCTATAAGCCTGATGTCTTCCTATAAGTTTAGTTTTAGGTTAGTGCTAAGTTGTTACTGGGTTAATATAAATGTTGGTGCCTTCTTCTGGCTAACAGACAACACATTCTATGTTAACTCGCTTGAATTCTTGAAATTCAATCAAGCTTAAGTAGGCCACTTTCTT

Coding sequence (CDS)

ATGGAAAACGCAGCCTCCAGATCCGAATTCTTGGCGACCTACGATTCTCCGCATCCTCTCTACGCCATGGCCATTTCTTCCCCTCACGCACACTCACTTAATTTCTCCAGTCGCATAGCGCTTGGCAGCTTCGTCGAAGAGTACAACAACCGCGTCGACATTGTGTCTTTTGATCCAGATTCTGTCTCAATTAAAACTAATCCTTCCCTCTCCTTTGAGCACCCGTACCCACCCACCAAGCTCATGTTTAATCCCAGTCCCCTCTCCTCTCTCTTGGCCTCCTCTGGCGACTCTCTACGCCTCTGGAAAGTCGGAGATTCTTCCATCGAACCCCTCTCCCTCCTCAACAACAGCAAAACCAGTGAATTCTGTGCCCCATTAACTTCCTTCGACTGGAATGAAGTTGAGCTTAAGAGAATTGGAACCTCCAGTATTGACACCACTTGTACTATTTGGGACATTGAGAAGAGTGTGGTGGAAACCCAGTTCATAGCTCACGACAAAGAGGTCTATGACATTGCTTGGGGGGAAGCCCGGGTTTTTGCCTCTGTTTCCGCGGATGGGTCGGTAAGAATTTTCGACATGAGAGATAAGGAGCACTCTACCATTATATACGAAAGCCCTCAACCCGATACCCCTTTGCTCAGACTGGCTTGGAACAAACAGGACCTGCGGTACATGGCCACAATTCTGATGGATAGCAACAAAATTGTTATTTTGGACATTCGCTCACCAAGTGTGCCGGTTGCTGAACTGGAGAGGCATCATTCCAGTGTCAATGCTATTGCCTGGGCGCCTCGGAGCTGCAGGCATATTTGTTCCGCAGGGGATGACAAGCAGGCGCTCATTTGGGAGCTGCCTATGGTTGCAGGCCCCAATGGCATTGATCCAATGTCCATGTATTCTGCTGCATGTGAAATTAACCAGTTGCAATGGTCCGCCGCCCAACCTGATTGGATTGCTTTAGCATTTTCCAACAAAATGCAGCTTTTGAAAGTTTGA

Protein sequence

MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV

Homology

[Close]

BLAST of MELO3C018988 vs. NCBI nr
Match: KAA0045351.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 674.1 bits (1738), Expect = 6.2e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of MELO3C018988 vs. NCBI nr
Match: TYJ96928.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 674.1 bits (1738), Expect = 6.2e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of MELO3C018988 vs. NCBI nr
Match: XP_008455615.1 (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 674.1 bits (1738), Expect = 6.2e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of MELO3C018988 vs. NCBI nr
Match: NP_001267687.1 (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat protein [Cucumis sativus] >KGN53658.1 hypothetical protein Csa_014980 [Cucumis sativus])

HSP 1 Score: 660.2 bits (1702), Expect = 9.3e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of MELO3C018988 vs. NCBI nr
Match: XP_038906093.1 (protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida])

HSP 1 Score: 643.3 bits (1658), Expect = 1.2e-180
Identity = 316/333 (94.89%), Postives = 323/333 (97.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           M+NA SRSEFL TYDSPHPLYAMAISSPH+HSLNF +RIALGSF+EEY NRVDIVSFDPD
Sbjct: 1   MQNADSRSEFLVTYDSPHPLYAMAISSPHSHSLNFPNRIALGSFIEEYTNRVDIVSFDPD 60

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK +PSLSFEHPYPPTKLMFNPSPLSSLLASSGD LRLWKVGDSSIEPLSLLNNSKT
Sbjct: 61  SLSIKAHPSLSFEHPYPPTKLMFNPSPLSSLLASSGDYLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK+VIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSA  EINQLQWSAAQPDWIALAFS KMQLLKV
Sbjct: 301 YSATHEINQLQWSAAQPDWIALAFSKKMQLLKV 333

[Close]

BLAST of MELO3C018988 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.6e-151
Identity = 265/344 (77.03%), Postives = 302/344 (87.79%), Query Frame = 0


Query: 1   MENAA----SRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 60
           M+N+A    SRSE   TYDSP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSVSIKTNPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VE KR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNK+VILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MELO3C018988 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-112
Identity = 203/334 (60.78%), Postives = 254/334 (76.05%), Query Frame = 0


Query: 7   RSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSVSIKT 66
           RSE + TY++P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRR----DKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKVGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE E +RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of MELO3C018988 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 6.0e-111
Identity = 201/339 (59.29%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 2   ENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TY++P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRR----DKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  VSIKTNPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKVGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE E +RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of MELO3C018988 vs. ExPASy Swiss-Prot
Match: Q552R1 (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-92
Identity = 182/327 (55.66%), Postives = 233/327 (71.25%), Query Frame = 0


Query: 13  TYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSVSIKTNPSLSF 72
           TY+SP  +Y ++ SS     +N   R+A+GSF+E+Y NRVD++  + ++   +      F
Sbjct: 8   TYNSPWVIYGLSWSS----RVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGF 67

Query: 73  EHPYPPTKLMFNPSPLSS---LLASSGDSLRLWKVGDS--SIEPLSLLNNSKTSEFCAPL 132
           EHPYPPTK M+ P   S+   LLA++GD LRLW+VG +  SI+  SLL N   SEFCAPL
Sbjct: 68  EHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPL 127

Query: 133 TSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFASVSA 192
           +SFDWNE +   + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FASV A
Sbjct: 128 SSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGA 187

Query: 193 DGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPS 252
           DGS+R+FD+R+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS K++ILDIR PS
Sbjct: 188 DGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPS 247

Query: 253 VPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAACE 312
           VP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A  E
Sbjct: 248 VPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNALAE 307

Query: 313 INQLQWSAAQPDWIALAFSNKMQLLKV 334
           INQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 308 INQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of MELO3C018988 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.1e-88
Identity = 178/339 (52.51%), Postives = 225/339 (66.37%), Query Frame = 0


Query: 14  YDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSVSIKTNPSLSFE 73
           Y++P  +YAM  S           R+ALGSFVEEYNN+V +V  D +S         +F+
Sbjct: 13  YEAPWTVYAMNWSVRPDKRF----RLALGSFVEEYNNKVQLVGLDEESSEFICRN--TFD 72

Query: 74  HPYPPTKLMFNPSP---LSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKTSEFCAPLTSF 133
           HPYP TKLM+ P        LLA+SGD LR+W+VG++      LLNN+K S+FCAPLTSF
Sbjct: 73  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 132

Query: 134 DWNEVELKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWGEA- 193
           DWNEV+   +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+  A 
Sbjct: 133 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 192

Query: 194 ---RVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 253
               +FASV ADGSVR+FD+R  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ MD  
Sbjct: 193 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGM 252

Query: 254 KIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGI 313
           ++VILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P  I
Sbjct: 253 EVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--PRAI 312

Query: 314 -DPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 EDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of MELO3C018988 vs. ExPASy TrEMBL
Match: A0A5D3BFF9 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00330 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.0e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of MELO3C018988 vs. ExPASy TrEMBL
Match: A0A5A7TV10 (Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001300 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.0e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 89  MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 148

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 149 SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 208

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 209 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 268

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 269 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 328

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 329 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 388

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 389 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 421

[Close]

BLAST of MELO3C018988 vs. ExPASy TrEMBL
Match: A0A1S3C1G5 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.0e-190
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of MELO3C018988 vs. ExPASy TrEMBL
Match: B7SBL6 (WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.5e-186
Identity = 326/333 (97.90%), Postives = 330/333 (99.10%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           ME+AASRSEFLATY+SPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKVGDSSIEPLSLLNNSKT 120
           S+SIK NPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWK+GDSSIEPLSLLNNSKT
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSLLASSGDSLRLWKLGDSSIEPLSLLNNSKT 120

Query: 121 SEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180
           SEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV
Sbjct: 121 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 180

Query: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240
           FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL
Sbjct: 181 FASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVIL 240

Query: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300
           DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM
Sbjct: 241 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 300

Query: 301 YSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           YSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 YSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of MELO3C018988 vs. ExPASy TrEMBL
Match: A0A6J1E766 (protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.0e-174
Identity = 308/339 (90.86%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60
           MENAA RSEF+ATYDSPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 120
           S+SI+T+PSLSF+HPYPPTKLMFNP  LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of MELO3C018988 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-152
Identity = 265/344 (77.03%), Postives = 302/344 (87.79%), Query Frame = 0


Query: 1   MENAA----SRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 60
           M+N+A    SRSE   TYDSP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSVSIKTNPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VE KR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNK+VILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MELO3C018988 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-152
Identity = 265/344 (77.03%), Postives = 302/344 (87.79%), Query Frame = 0


Query: 1   MENAA----SRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 60
           M+N+A    SRSE   TYDSP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSVSIKTNPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VE KR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNK+VILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MELO3C018988 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-152
Identity = 265/344 (77.03%), Postives = 302/344 (87.79%), Query Frame = 0


Query: 1   MENAA----SRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVS 60
           M+N+A    SRSE   TYDSP+PLYAMA SS  + S     RIA+GSF+E+YNNR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSVSIKTNPSLSFEHPYPPTKLMFNPSPL-----SSLLASSGDSLRLWKVGD--SSI 120
           FD DS+++K  P+LSFEHPYPPTKLMF+P  L       LLASSGD LRLW++ +  S++
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTV 120

Query: 121 EPLSLLNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKE 180
           EP+S+LNNSKTSEFCAPLTSFDWN+VE KR+GT SIDTTCTIWDIEKSVVETQ IAHDKE
Sbjct: 121 EPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKE 180

Query: 181 VYDIAWGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240
           V+DIAWGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
Sbjct: 181 VHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 240

Query: 241 ILMDSNKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMV 300
           ILMDSNK+VILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP V
Sbjct: 241 ILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTV 300

Query: 301 AGPNGIDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           AGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 AGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of MELO3C018988 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 406.8 bits (1044), Expect = 1.7e-113
Identity = 203/334 (60.78%), Postives = 254/334 (76.05%), Query Frame = 0


Query: 7   RSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDSVSIKT 66
           RSE + TY++P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSVRR----DKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  NPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKVGD--SSIEPLSLLNNSKTS 126
           +P+LSFEHPYPPTK +F P        LLA+S D LRLW++ D  S +E  S LN++K S
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNS 137

Query: 127 EFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 186
           EFC PLTSFDWNE E +RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG   VF
Sbjct: 138 EFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVF 197

Query: 187 ASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILD 246
           ASVSADGSVR+FD+RDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS K+V+LD
Sbjct: 198 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 257

Query: 247 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGIDPMS 306
           IR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+DP+ 
Sbjct: 258 IRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPIL 317

Query: 307 MYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
            Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 AYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of MELO3C018988 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 402.1 bits (1032), Expect = 4.3e-112
Identity = 201/339 (59.29%), Postives = 253/339 (74.63%), Query Frame = 0


Query: 2   ENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPDS 61
           E  + RSE + TY++P  +YAM  S       +   R+A+ S +E+Y NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSIRR----DKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  VSIKTNPSLSFEHPYPPTKLMFNPS---PLSSLLASSGDSLRLWKVGD--SSIEPLSLLN 121
             I+++P+L FEHPYPPTK  F P        LLA+S D LRLW++ D  S +E  S L+
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLS 132

Query: 122 NSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWG 181
           + K SEF  P+TSFDWNE E +RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG
Sbjct: 133 SDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG 192

Query: 182 EARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK 241
              VFASVS DGSVR+FD+RDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K
Sbjct: 193 GVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAK 252

Query: 242 IVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNG 301
           IV+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G
Sbjct: 253 IVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGG 312

Query: 302 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 334
           +DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 LDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

The following BLAST results are available for this feature:

BLAST of MELO3C018988 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045351.1	6.2e-190	100.00	protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa]	[more]
TYJ96928.1	6.2e-190	100.00	protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo var. makuwa]	[more]
XP_008455615.1	6.2e-190	100.00	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
NP_001267687.1	9.3e-186	97.90	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat ...	[more]
XP_038906093.1	1.2e-180	94.89	protein TRANSPARENT TESTA GLABRA 1 [Benincasa hispida]	[more]

BLAST of MELO3C018988 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGN1	1.6e-151	77.03	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
Q9LPV9	2.4e-112	60.78	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	6.0e-111	59.29	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q552R1	1.6e-92	55.66	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
P61962	1.1e-88	52.51	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of MELO3C018988 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFF9	3.0e-190	100.00	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TV10	3.0e-190	100.00	Protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3C1G5	3.0e-190	100.00	protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 ...	[more]
B7SBL6	4.5e-186	97.90	WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1	[more]
A0A6J1E766	3.0e-174	90.86	protein TRANSPARENT TESTA GLABRA 1 OS=Cucurbita moschata OX=3662 GN=LOC111430561...	[more]

BLAST of MELO3C018988 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24520.1	1.1e-152	77.03	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	1.1e-152	77.03	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	1.1e-152	77.03	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	1.7e-113	60.78	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	4.3e-112	59.29	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 156..194 e-value: 1.4E-4 score: 31.3 coord: 245..285 e-value: 1.2E-5 score: 34.8 coord: 65..103 e-value: 8.2 score: 11.2 coord: 108..153 e-value: 7.1 score: 11.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 249..284 e-value: 0.025 score: 15.5 coord: 163..194 e-value: 0.094 score: 13.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 163..203 score: 9.305395
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 252..286 score: 9.739832
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 45..331 e-value: 1.1E-37 score: 132.0
IPR031104	Protein TRANSPARENT TESTA GLABRA 1	PANTHER	PTHR19919:SF10	PROTEIN TRANSPARENT TESTA GLABRA 1	coord: 7..333
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 7..333
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 272..286
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 30..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018988.1	MELO3C018988.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding