MELO3C016963.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016963.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Eukaryotic translation initiation factor 5A
Location	chr07: 857824 .. 860322 (+)
RNA-Seq Expression	MELO3C016963.jh1
Synteny	MELO3C016963.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATCAACATAGTTTAGGGGGCTCGCGTCAGAAACCCTAATTGATACAATACGTGGCCGGTTGAAACGTGATGCTATAAATTGGTCTCGTCCTCTTGACTCGTACTCTCCTCCTTCCTCCCGTTTTCCTTCCGCTTCCAACGAAATCCCACTGTTGAACACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCCACCGCAAGCTGTAGAAGAACAAAATCTTTAGCCATGTCGGACGAGGAGCATCACTTTGAATCCAAGGCCGACGCCGGAGCCTCCAAGACCTACCCACAACAGGCCGGAACTATCCGGAAGAACGGCTACATCGTCATCAAGAACCGTCCATGCAAGGTGATTTGTTTGTGTTTATTGCGATGATTTGATATTCTTTTTCTCATCAGATGTGTTTGTTTTTTGTGGTTTGATTTGTGTTGCTTAAGGTTGATTTTTGGATCGAGCGATTTAGATATTTGATTGATATTCGAGAGTTTTCTTTTTCTGGATTAACGATTCTTATACGGTGGATTTTTTTTTCTTCTGATTTTTGAGTGTTGGATTTGGGAAAATTGATGGATCTGATGTTGAAATTGACATTGGCGATTGTTCTGATCAATATTTGTTTGGAGTTTGGGGATTTTGTGATTATGACTTCGAAGGATCTCTTGATGGCTGAGTTTCGATCGGTCAACGATAAACAGTGTGCTATCCCATCCTCTAATCCTTCTTGCGAGGATGCTGGTGTTTATGGTTGTTTACAGTGTGGTTTTAATTTAATATTGATTTTATCTGGAGAAGATGATTTTCATAGTGTCGTGTTTTTTCCTTTTTTGGGTATTCTTTTGTCACGAGCCACATGGGGGTGAGTTTATGTTTATTTGAGACTGTTAGTGCTACCTGACATTAATTATTGAAAAGTATAACGAGAGAGAGTCCAAAAGGTCAAATTGATTAATACTACTAAATTATAACTTTAGGCATCGAAGTGGATAAGCACTTGTTAATTTGAAAGTGTACTTTTCTTTGGGTTGTATGGTAATGCAGGTGGTTGAGGTTTCAACTTCTAAGACAGGAAAGCATGGGCATGCTAAGTGTCACTTTGTTGGAATCGACATCTTCACTGGCAAGAAGCTTGAAGATATTGTTCCTTCATCCCACAATTGTGACGTAAGGGGGTCTATTATATAGCTTTCGAACTATTCCTCTGTATCGATTTACCATTTTCAGTAATGGTCTTTGTTTCATGGTTTGTAGGTGCCCCATGTTAATCGTACTGATTATCAGCTGATTGATATCTCTGAGGATGGATTTGTGAGTACTTTGTTTTTATGAGTTTGTTTGAAATACTGGGTCTTGTTGTTATCAAGAAACTTATTCGTAATGATATAATGTTATATCCGTTTTATTAGATTTCTAGATTTCTGTGGAAGTTTTCATGTTTCAGTTTAACTTTTGGTAATCAATTTTATTGGTGAAACTCTGTTAGAATAGATTGTTTGTCCAGTATGTCGGTTTGATGTCTTTAGACTCTCCTTGCATTCATTTGTATGGGAAGTAATCTGGCAATTGGTTTTGTTAAGTACTGTTTCCAGAATGTAATTTGGAAATGAAGGAGCAAATATTTGTGTGAAGGGATTGTTAAACAAGCATAGATGGAGAAGGAAGCAATGAATCATTTATATGTGCTGAAGCGTGTAAAGCCCTGTTCCATTAATTGAATGATGTTTCTCTTTTGTGCAGGTGAGTCTTTTAACTGACAGTGGTGATACCAAGGATGATTTGAGACTTCCAACTGATGATAACCTGCTCAAACAGGTAAAGGCACACATGGACACTTGAAAAGAACAATCCGTGCACTCAAGATAGTTTTGTCTACTTGAAAAAGAGCTTTGATGAAGTTAATCGTGCAAGAATCATTATTTTTTCTTTTTTGTTAGAGGGAACCTCATTCCTTCTGTTCCCCATGCTTAATATTCCATTCTTAAGATATTGTGAAGATATGGCCAGATGGGTTTATTCCTTAATATTCTGTTTTTATGATTTATGATGATTTATCAACATAAAAACAAGCTGAACATGTCCTTTGTATTCACAGATTAAGGAGGGATTTGCTGAAGGAAAGGACCTTGTCGTGTCGGTGATGTCTTCCATGGGAGAGGAACAAATTTGTGCACTGAAGGATATCGGCCCAAAGTAGGTCTTGTCGTCGTACTCAAAGTTAAAAGTTGTGGTCATCGACTGCTTTTTATCGCCGAATTCCTCTATTGAATCTTTTAAATGATGGTATAATTAATTAGCAGACTTTGTATCTGTTAACGCCTCACTCTTCTCCTTCCCTCCATTCCCTTTTCTCATCTCATCTCACCTTCTGGCCCAGGATGTATGGTTGGTTCGTGCATCATAACTGTGCTTTATGTTGTGTTATTTTATGATATTGGTGTAATGTTATTGGGTTTTTGGATGCTTACTTTGATAAATCGAAGTGAATAATTTTTGCGAA

mRNA sequence

AATATCAACATAGTTTAGGGGGCTCGCGTCAGAAACCCTAATTGATACAATACGTGGCCGGTTGAAACGTGATGCTATAAATTGGTCTCGTCCTCTTGACTCGTACTCTCCTCCTTCCTCCCGTTTTCCTTCCGCTTCCAACGAAATCCCACTGTTGAACACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCCACCGCAAGCTGTAGAAGAACAAAATCTTTAGCCATGTCGGACGAGGAGCATCACTTTGAATCCAAGGCCGACGCCGGAGCCTCCAAGACCTACCCACAACAGGCCGGAACTATCCGGAAGAACGGCTACATCGTCATCAAGAACCGTCCATGCAAGGTGGTTGAGGTTTCAACTTCTAAGACAGGAAAGCATGGGCATGCTAAGTGTCACTTTGTTGGAATCGACATCTTCACTGGCAAGAAGCTTGAAGATATTGTTCCTTCATCCCACAATTGTGACGTGCCCCATGTTAATCGTACTGATTATCAGCTGATTGATATCTCTGAGGATGGATTTGTGAGTCTTTTAACTGACAGTGGTGATACCAAGGATGATTTGAGACTTCCAACTGATGATAACCTGCTCAAACAGATTAAGGAGGGATTTGCTGAAGGAAAGGACCTTGTCGTGTCGGTGATGTCTTCCATGGGAGAGGAACAAATTTGTGCACTGAAGGATATCGGCCCAAAGTAGGTCTTGTCGTCGTACTCAAAGTTAAAAGTTGTGGTCATCGACTGCTTTTTATCGCCGAATTCCTCTATTGAATCTTTTAAATGATGGTATAATTAATTAGCAGACTTTGTATCTGTTAACGCCTCACTCTTCTCCTTCCCTCCATTCCCTTTTCTCATCTCATCTCACCTTCTGGCCCAGGATGTATGGTTGGTTCGTGCATCATAACTGTGCTTTATGTTGTGTTATTTTATGATATTGGTGTAATGTTATTGGGTTTTTGGATGCTTACTTTGATAAATCGAAGTGAATAATTTTTGCGAA

Coding sequence (CDS)

ATGTCGGACGAGGAGCATCACTTTGAATCCAAGGCCGACGCCGGAGCCTCCAAGACCTACCCACAACAGGCCGGAACTATCCGGAAGAACGGCTACATCGTCATCAAGAACCGTCCATGCAAGGTGGTTGAGGTTTCAACTTCTAAGACAGGAAAGCATGGGCATGCTAAGTGTCACTTTGTTGGAATCGACATCTTCACTGGCAAGAAGCTTGAAGATATTGTTCCTTCATCCCACAATTGTGACGTGCCCCATGTTAATCGTACTGATTATCAGCTGATTGATATCTCTGAGGATGGATTTGTGAGTCTTTTAACTGACAGTGGTGATACCAAGGATGATTTGAGACTTCCAACTGATGATAACCTGCTCAAACAGATTAAGGAGGGATTTGCTGAAGGAAAGGACCTTGTCGTGTCGGTGATGTCTTCCATGGGAGAGGAACAAATTTGTGCACTGAAGGATATCGGCCCAAAGTAG

Protein sequence

MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTDDNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK

Homology

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BLAST of MELO3C016963.jh1 vs. NCBI nr
Match: XP_008452854.1 (PREDICTED: eukaryotic translation initiation factor 5A-like [Cucumis melo] >KAA0064584.1 eukaryotic translation initiation factor 5A-like [Cucumis melo var. makuwa] >TYK20006.1 eukaryotic translation initiation factor 5A-like [Cucumis melo var. makuwa])

HSP 1 Score: 322 bits (826), Expect = 3.63e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. NCBI nr
Match: XP_012438813.1 (PREDICTED: eukaryotic translation initiation factor 5A [Gossypium raimondii] >XP_040963053.1 eukaryotic translation initiation factor 5A [Gossypium hirsutum] >KAB2000022.1 hypothetical protein ES319_D12G203100v1 [Gossypium barbadense] >TYG41913.1 hypothetical protein ES288_D12G214400v1 [Gossypium darwinii] >TYH39978.1 hypothetical protein ES332_D12G214800v1 [Gossypium tomentosum] >KAG4116656.1 hypothetical protein ERO13_D12G182600v2 [Gossypium hirsutum] >KJB53260.1 hypothetical protein B456_008G195800 [Gossypium raimondii])

HSP 1 Score: 320 bits (820), Expect = 2.99e-110
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIK+GFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

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BLAST of MELO3C016963.jh1 vs. NCBI nr
Match: XP_038899640.1 (eukaryotic translation initiation factor 5A-like [Benincasa hispida])

HSP 1 Score: 319 bits (817), Expect = 8.87e-110
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIKEGFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. NCBI nr
Match: XP_016741731.1 (eukaryotic translation initiation factor 5A [Gossypium hirsutum] >XP_017638416.1 PREDICTED: eukaryotic translation initiation factor 5A [Gossypium arboreum] >TYG90738.1 hypothetical protein ES288_A12G206500v1 [Gossypium darwinii] >TYH96866.1 hypothetical protein ES332_A12G206900v1 [Gossypium tomentosum] >TYJ05877.1 hypothetical protein E1A91_A12G194300v1 [Gossypium mustelinum] >KAG4170961.1 hypothetical protein ERO13_A12G179900v2 [Gossypium hirsutum] >KHG00291.1 Eukaryotic translation initiation factor 5A [Gossypium arboreum])

HSP 1 Score: 318 bits (815), Expect = 1.73e-109
Identity = 156/159 (98.11%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT+SGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIKEGFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

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BLAST of MELO3C016963.jh1 vs. NCBI nr
Match: TYI51867.1 (hypothetical protein E1A91_D12G205900v1 [Gossypium mustelinum])

HSP 1 Score: 317 bits (813), Expect = 3.49e-109
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIK+GFA GKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKDGFAGGKDLVVSVMSAMGEEQICALKDIGPK 159

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BLAST of MELO3C016963.jh1 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 308.9 bits (790), Expect = 3.3e-83
Identity = 147/159 (92.45%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIF GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++G+TKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           +NLL QIK+GFAEGKDLVVSVMS+MGEE+IC+LKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

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BLAST of MELO3C016963.jh1 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.3e-83
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           DNLL QIK+GFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy Swiss-Prot
Match: P69039 (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A1 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-82
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           DNLL  IK+GFAEGKDLV+SVMS+MGEEQIC +KD+GPK
Sbjct: 121 DNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy Swiss-Prot
Match: P69040 (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum OX=4097 GN=EIF-5A1 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-82
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           DNLL  IK+GFAEGKDLV+SVMS+MGEEQIC +KD+GPK
Sbjct: 121 DNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy Swiss-Prot
Match: P56337 (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.8e-82
Identity = 145/159 (91.19%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT++G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           D LL Q+K+GFAEGKDLV+SVMS+MGEEQIC +KDIGPK
Sbjct: 121 DTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D8W1 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001220 PE=3 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.76e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BUT6 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103493751 PE=3 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.76e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy TrEMBL
Match: A0A5D2IBY7 (Eukaryotic translation initiation factor 5A OS=Gossypium tomentosum OX=34277 GN=ES332_D12G214800v1 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 1.45e-110
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIK+GFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy TrEMBL
Match: A0A0D2UC98 (Eukaryotic translation initiation factor 5A OS=Gossypium raimondii OX=29730 GN=B456_008G195800 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 1.45e-110
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIK+GFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. ExPASy TrEMBL
Match: A0A5J5P122 (Eukaryotic translation initiation factor 5A OS=Gossypium barbadense OX=3634 GN=ES319_D12G203100v1 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 1.45e-110
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 159
           DNLLKQIK+GFAEGKDLVVSVMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLKQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C016963.jh1 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 291.6 bits (745), Expect = 3.9e-79
Identity = 143/159 (89.94%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG+VSLLTD+G TKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           D LL+QIK GF +GKDLVVSVMS+MGEEQI ALKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of MELO3C016963.jh1 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 281.6 bits (719), Expect = 4.0e-76
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNR DYQLIDISEDGFVSLLTD+G TKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIGPK 160
           + LL Q+K GF EGKD+VVSVMS+MGEEQ+CALK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of MELO3C016963.jh1 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-73
Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDGFVSLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 DNLLKQIKEGFAEGKDLVVSVMSSMGEEQICALKDIG 158
           D L  Q++ GF EGKD+VVSVMSSMGEEQICA+K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of MELO3C016963.jh1 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 224.9 bits (572), Expect = 4.4e-59
Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDGFVSLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 DNLLKQI 128
           D L  Q+
Sbjct: 121 DGLTAQL 126

The following BLAST results are available for this feature:

BLAST of MELO3C016963.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452854.1	3.63e-111	100.00	PREDICTED: eukaryotic translation initiation factor 5A-like [Cucumis melo] >KAA0...	[more]
XP_012438813.1	2.99e-110	98.74	PREDICTED: eukaryotic translation initiation factor 5A [Gossypium raimondii] >XP...	[more]
XP_038899640.1	8.87e-110	98.74	eukaryotic translation initiation factor 5A-like [Benincasa hispida]	[more]
XP_016741731.1	1.73e-109	98.11	eukaryotic translation initiation factor 5A [Gossypium hirsutum] >XP_017638416.1...	[more]
TYI51867.1	3.49e-109	98.11	hypothetical protein E1A91_D12G205900v1 [Gossypium mustelinum]	[more]

BLAST of MELO3C016963.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AXJ4	3.3e-83	92.45	Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV...	[more]
P24922	7.3e-83	93.71	Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40...	[more]
P69039	1.6e-82	91.82	Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia OX=40...	[more]
P69040	1.6e-82	91.82	Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum OX=4097 GN=EI...	[more]
P56337	4.8e-82	91.19	Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EI...	[more]

BLAST of MELO3C016963.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D8W1	1.76e-111	100.00	Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BUT6	1.76e-111	100.00	Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103493...	[more]
A0A5D2IBY7	1.45e-110	98.74	Eukaryotic translation initiation factor 5A OS=Gossypium tomentosum OX=34277 GN=...	[more]
A0A0D2UC98	1.45e-110	98.74	Eukaryotic translation initiation factor 5A OS=Gossypium raimondii OX=29730 GN=B...	[more]
A0A5J5P122	1.45e-110	98.74	Eukaryotic translation initiation factor 5A OS=Gossypium barbadense OX=3634 GN=E...	[more]

BLAST of MELO3C016963.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13950.1	3.9e-79	89.94	eukaryotic elongation factor 5A-1	[more]
AT1G69410.1	4.0e-76	84.91	eukaryotic elongation factor 5A-3	[more]
AT1G26630.1	4.1e-73	82.80	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]
AT1G26630.2	4.4e-59	84.25	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 85..154 e-value: 1.7E-34 score: 130.6
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 85..154 e-value: 9.0E-30 score: 102.6
None	No IPR available	GENE3D	2.40.50.140		coord: 86..158 e-value: 1.7E-34 score: 119.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11673:SF42	BNAA07G09420D PROTEIN	coord: 1..156
None	No IPR available	CDD	cd04468	S1_eIF5A	coord: 86..156 e-value: 3.06592E-32 score: 108.008
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..85 e-value: 5.0E-44 score: 150.1
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 17..153 e-value: 1.8E-41 score: 139.0
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 1..157 e-value: 1.5E-67 score: 224.0
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	coord: 1..156
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 50..57
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 15..93
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 86..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016963.jh1.t1	MELO3C016963.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003746	translation elongation factor activity