Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCAAACGAAAATGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAACCACAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAAACGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACAGTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCTTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAAAAATGTACGAACAGCCGGTCGATGAGCGGGCGGGGGATCACTGGTGGTTCCGCCACGAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTCCTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTTTATTTAA
mRNA sequence
ATGGCGAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCAAACGAAAATGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAACCACAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAAACGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACAGTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCTTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAAAAATGTACGAACAGCCGGTCGATGAGCGGGCGGGGGATCACTGGTGGTTCCGCCACGAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTCCTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTTTATTTAA
Coding sequence (CDS)
ATGGCGAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCAAACGAAAATGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAACCACAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAAACGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACAGTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCTTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAAAAATGTACGAACAGCCGGTCGATGAGCGGGCGGGGGATCACTGGTGGTTCCGCCACGAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTCCTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTTTATTTAA
Protein sequence
MASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI
Homology
BLAST of MELO3C016839.jh1 vs. NCBI nr
Match:
KAA0064469.1 (hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK20119.1 hypothetical protein E5676_scaffold134G002440 [Cucumis melo var. makuwa])
HSP 1 Score: 315 bits (806), Expect = 5.60e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 18 MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 77
MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR
Sbjct: 1 MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 60
Query: 78 CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 137
CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI
Sbjct: 61 CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 120
Query: 138 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 171
TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI
Sbjct: 121 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 154
BLAST of MELO3C016839.jh1 vs. NCBI nr
Match:
XP_004141298.1 (uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetical protein Csa_012140 [Cucumis sativus])
HSP 1 Score: 291 bits (744), Expect = 2.02e-98
Identity = 148/166 (89.16%), Postives = 150/166 (90.36%), Query Frame = 0
Query: 1 MASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFE--TSMLKLPSPPCRS 60
MASSRPIEIDFEFL TK NVPFSWEAKPGVPKPQSQPSP+ASLFE +MLKLPSPPCRS
Sbjct: 1 MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60
Query: 61 ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61 ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
Query: 121 FVEAYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCC 164
FVEAYKKC NSRS I G SATNG KRPNIIRRVLFSLSR C
Sbjct: 121 FVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC 161
BLAST of MELO3C016839.jh1 vs. NCBI nr
Match:
KAG6608406.1 (hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 229 bits (585), Expect = 4.57e-74
Identity = 118/166 (71.08%), Postives = 129/166 (77.71%), Query Frame = 0
Query: 2 ASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESA 61
+SS P++ DFE LQT+ NVPFSWEAKPGVPK QS SP+ S FE S LKLPSPP RSESA
Sbjct: 6 SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESA 65
Query: 62 RLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVE 121
RL DY I S PR A+SARMAK+ LWL+AYSD SSFGFGCCK D K+TDPFVE
Sbjct: 66 RLPDDYGEAIPCSSPR--AKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVE 125
Query: 122 AYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASS 167
AYKKCTN S + R I GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 126 AYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 169
BLAST of MELO3C016839.jh1 vs. NCBI nr
Match:
KAG7037747.1 (hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 229 bits (585), Expect = 4.57e-74
Identity = 118/166 (71.08%), Postives = 129/166 (77.71%), Query Frame = 0
Query: 2 ASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESA 61
+SS P++ DFE LQT+ NVPFSWEAKPGVPK QS SP+ S FE S LKLPSPP RSESA
Sbjct: 6 SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESA 65
Query: 62 RLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVE 121
RL DY I S PR A+SARMAK+ LWL+AYSD SSFGFGCCK D K+TDPFVE
Sbjct: 66 RLPDDYGEAIPCSSPR--AKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVE 125
Query: 122 AYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASS 167
AYKKCTN S + R I GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 126 AYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 169
BLAST of MELO3C016839.jh1 vs. NCBI nr
Match:
KDP41585.1 (hypothetical protein JCGZ_15992 [Jatropha curcas])
HSP 1 Score: 62.0 bits (149), Expect = 1.54e-08
Identity = 50/155 (32.26%), Postives = 68/155 (43.87%), Query Frame = 0
Query: 16 TKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGL----I 75
+K NVPFSWE KPGV K + + + + ++KLP PPC ES R+S +
Sbjct: 9 SKGNVPFSWEKKPGVSKVNAMINNNQEQDQI-VVKLPPPPCPIESPRVSAHEISIPLPPC 68
Query: 76 TYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRS 135
T+ PP +S K DPF+ AYK+CT S +
Sbjct: 69 TFQPPS-------------------------------RSSSRKWDDPFLAAYKECTKSST 128
Query: 136 MSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCAS 166
S + GGSA G R + R+ +F LS K S
Sbjct: 129 RSKAKVAGGSA--GFSRSGL-RKGMFKLSCKSSCS 128
BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3D9E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002440 PE=4 SV=1)
HSP 1 Score: 315 bits (806), Expect = 2.71e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 18 MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 77
MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR
Sbjct: 1 MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 60
Query: 78 CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 137
CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI
Sbjct: 61 CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 120
Query: 138 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 171
TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI
Sbjct: 121 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 154
BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match:
A0A0A0KZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1)
HSP 1 Score: 301 bits (772), Expect = 6.72e-103
Identity = 154/171 (90.06%), Postives = 156/171 (91.23%), Query Frame = 0
Query: 1 MASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFE--TSMLKLPSPPCRS 60
MASSRPIEIDFEFL TK NVPFSWEAKPGVPKPQSQPSP+ASLFE +MLKLPSPPCRS
Sbjct: 1 MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60
Query: 61 ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61 ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
Query: 121 FVEAYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASSLF 169
FVEAYKKC NSRS I G SATNG KRPNIIRRVLFSLSRKC ASSLF
Sbjct: 121 FVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRKCFASSLF 166
BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match:
A0A067LAQ4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 7.45e-09
Identity = 50/155 (32.26%), Postives = 68/155 (43.87%), Query Frame = 0
Query: 16 TKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGL----I 75
+K NVPFSWE KPGV K + + + + ++KLP PPC ES R+S +
Sbjct: 9 SKGNVPFSWEKKPGVSKVNAMINNNQEQDQI-VVKLPPPPCPIESPRVSAHEISIPLPPC 68
Query: 76 TYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRS 135
T+ PP +S K DPF+ AYK+CT S +
Sbjct: 69 TFQPPS-------------------------------RSSSRKWDDPFLAAYKECTKSST 128
Query: 136 MSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCAS 166
S + GGSA G R + R+ +F LS K S
Sbjct: 129 RSKAKVAGGSA--GFSRSGL-RKGMFKLSCKSSCS 128
BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match:
A0A1R3HKK6 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28461 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 1.02e-08
Identity = 55/154 (35.71%), Postives = 70/154 (45.45%), Query Frame = 0
Query: 15 QTKM----NVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGL 74
QTK+ NVPFSWE KPGV K SQ F + KLP PPC E+AR+S S
Sbjct: 3 QTKVHSQGNVPFSWENKPGVCKMTSQDCLKEDFF---LQKLPPPPCPPETARVSISNSIQ 62
Query: 75 ITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSR 134
PP A+ S SS G KSDD PF+ AYK+CT S
Sbjct: 63 DNKIPPP--------------PGAFQPPSRSSSRRGLKKSDD-----PFLAAYKECTKST 122
Query: 135 SMS--GRGITGGSATNGVKRPNIIRRVLFSLSRK 162
+ + + GG + N +++ +FS S K
Sbjct: 123 NKGKLAKNVNGGGSGN-------LKKGVFSFSCK 127
BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match:
A0A2K1XNQ3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G012900 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 3.64e-08
Identity = 49/141 (34.75%), Postives = 68/141 (48.23%), Query Frame = 0
Query: 14 LQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITY 73
+Q+K+NVPFSWE KPGV K Q ++ LKLP PP
Sbjct: 7 VQSKVNVPFSWEQKPGVSKVTRQEVRPEDIWHF-RLKLPPPP------------------ 66
Query: 74 SPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMS 133
PP C ++S + D+ L+ S S SSF K + DPF+ AYKKC S ++
Sbjct: 67 PPPPCASKSTKFPSDYS-LQVPSTPS-SSF-----KKGTRIQEDPFLRAYKKCIGS-PIN 118
Query: 134 GRGITGGSATNGVKRPNIIRR 154
G+ + G +G RP I+R+
Sbjct: 127 GKLTSDGKTDHG--RPKIVRK 118
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0064469.1 | 5.60e-108 | 100.00 | hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK201... | [more] |
XP_004141298.1 | 2.02e-98 | 89.16 | uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetica... | [more] |
KAG6608406.1 | 4.57e-74 | 71.08 | hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7037747.1 | 4.57e-74 | 71.08 | hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KDP41585.1 | 1.54e-08 | 32.26 | hypothetical protein JCGZ_15992 [Jatropha curcas] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D9E3 | 2.71e-108 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KZZ9 | 6.72e-103 | 90.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1 | [more] |
A0A067LAQ4 | 7.45e-09 | 32.26 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1 | [more] |
A0A1R3HKK6 | 1.02e-08 | 35.71 | Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28461 PE=4 SV=1 | [more] |
A0A2K1XNQ3 | 3.64e-08 | 34.75 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G012900 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |