MELO3C016839.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C016839.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 1842181 .. 1842696 (+)
RNA-Seq ExpressionMELO3C016839.jh1
SyntenyMELO3C016839.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCAAACGAAAATGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAACCACAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAAACGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACAGTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCTTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAAAAATGTACGAACAGCCGGTCGATGAGCGGGCGGGGGATCACTGGTGGTTCCGCCACGAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTCCTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTTTATTTAA

mRNA sequence

ATGGCGAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCAAACGAAAATGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAACCACAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAAACGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACAGTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCTTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAAAAATGTACGAACAGCCGGTCGATGAGCGGGCGGGGGATCACTGGTGGTTCCGCCACGAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTCCTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTTTATTTAA

Coding sequence (CDS)

ATGGCGAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCAAACGAAAATGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAACCACAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAAACGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACAGTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCTTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAAAAATGTACGAACAGCCGGTCGATGAGCGGGCGGGGGATCACTGGTGGTTCCGCCACGAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTCCTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTTTATTTAA

Protein sequence

MASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI
Homology
BLAST of MELO3C016839.jh1 vs. NCBI nr
Match: KAA0064469.1 (hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK20119.1 hypothetical protein E5676_scaffold134G002440 [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (806), Expect = 5.60e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0

Query: 18  MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 77
           MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR
Sbjct: 1   MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 60

Query: 78  CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 137
           CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI
Sbjct: 61  CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 120

Query: 138 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 171
           TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI
Sbjct: 121 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 154

BLAST of MELO3C016839.jh1 vs. NCBI nr
Match: XP_004141298.1 (uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetical protein Csa_012140 [Cucumis sativus])

HSP 1 Score: 291 bits (744), Expect = 2.02e-98
Identity = 148/166 (89.16%), Postives = 150/166 (90.36%), Query Frame = 0

Query: 1   MASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFE--TSMLKLPSPPCRS 60
           MASSRPIEIDFEFL TK NVPFSWEAKPGVPKPQSQPSP+ASLFE   +MLKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
           ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FVEAYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCC 164
           FVEAYKKC NSRS     I G SATNG KRPNIIRRVLFSLSR  C
Sbjct: 121 FVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC 161

BLAST of MELO3C016839.jh1 vs. NCBI nr
Match: KAG6608406.1 (hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (585), Expect = 4.57e-74
Identity = 118/166 (71.08%), Postives = 129/166 (77.71%), Query Frame = 0

Query: 2   ASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESA 61
           +SS P++ DFE LQT+ NVPFSWEAKPGVPK QS  SP+ S FE S LKLPSPP RSESA
Sbjct: 6   SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESA 65

Query: 62  RLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVE 121
           RL  DY   I  S PR  A+SARMAK+ LWL+AYSD   SSFGFGCCK D  K+TDPFVE
Sbjct: 66  RLPDDYGEAIPCSSPR--AKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVE 125

Query: 122 AYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASS 167
           AYKKCTN  S + R I GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 126 AYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 169

BLAST of MELO3C016839.jh1 vs. NCBI nr
Match: KAG7037747.1 (hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (585), Expect = 4.57e-74
Identity = 118/166 (71.08%), Postives = 129/166 (77.71%), Query Frame = 0

Query: 2   ASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESA 61
           +SS P++ DFE LQT+ NVPFSWEAKPGVPK QS  SP+ S FE S LKLPSPP RSESA
Sbjct: 6   SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESA 65

Query: 62  RLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVE 121
           RL  DY   I  S PR  A+SARMAK+ LWL+AYSD   SSFGFGCCK D  K+TDPFVE
Sbjct: 66  RLPDDYGEAIPCSSPR--AKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVE 125

Query: 122 AYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASS 167
           AYKKCTN  S + R I GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 126 AYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 169

BLAST of MELO3C016839.jh1 vs. NCBI nr
Match: KDP41585.1 (hypothetical protein JCGZ_15992 [Jatropha curcas])

HSP 1 Score: 62.0 bits (149), Expect = 1.54e-08
Identity = 50/155 (32.26%), Postives = 68/155 (43.87%), Query Frame = 0

Query: 16  TKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGL----I 75
           +K NVPFSWE KPGV K  +  + +    +  ++KLP PPC  ES R+S     +     
Sbjct: 9   SKGNVPFSWEKKPGVSKVNAMINNNQEQDQI-VVKLPPPPCPIESPRVSAHEISIPLPPC 68

Query: 76  TYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRS 135
           T+ PP                                +S   K  DPF+ AYK+CT S +
Sbjct: 69  TFQPPS-------------------------------RSSSRKWDDPFLAAYKECTKSST 128

Query: 136 MSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCAS 166
            S   + GGSA  G  R  + R+ +F LS K   S
Sbjct: 129 RSKAKVAGGSA--GFSRSGL-RKGMFKLSCKSSCS 128

BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D9E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002440 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 2.71e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0

Query: 18  MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 77
           MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR
Sbjct: 1   MNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPR 60

Query: 78  CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 137
           CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI
Sbjct: 61  CRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGI 120

Query: 138 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 171
           TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI
Sbjct: 121 TGGSATNGVKRPNIIRRVLFSLSRKCCASSLFFI 154

BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 6.72e-103
Identity = 154/171 (90.06%), Postives = 156/171 (91.23%), Query Frame = 0

Query: 1   MASSRPIEIDFEFLQTKMNVPFSWEAKPGVPKPQSQPSPSASLFE--TSMLKLPSPPCRS 60
           MASSRPIEIDFEFL TK NVPFSWEAKPGVPKPQSQPSP+ASLFE   +MLKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
           ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FVEAYKKCTNSRSMSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCASSLF 169
           FVEAYKKC NSRS     I G SATNG KRPNIIRRVLFSLSRKC ASSLF
Sbjct: 121 FVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRKCFASSLF 166

BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match: A0A067LAQ4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.45e-09
Identity = 50/155 (32.26%), Postives = 68/155 (43.87%), Query Frame = 0

Query: 16  TKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGL----I 75
           +K NVPFSWE KPGV K  +  + +    +  ++KLP PPC  ES R+S     +     
Sbjct: 9   SKGNVPFSWEKKPGVSKVNAMINNNQEQDQI-VVKLPPPPCPIESPRVSAHEISIPLPPC 68

Query: 76  TYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRS 135
           T+ PP                                +S   K  DPF+ AYK+CT S +
Sbjct: 69  TFQPPS-------------------------------RSSSRKWDDPFLAAYKECTKSST 128

Query: 136 MSGRGITGGSATNGVKRPNIIRRVLFSLSRKCCAS 166
            S   + GGSA  G  R  + R+ +F LS K   S
Sbjct: 129 RSKAKVAGGSA--GFSRSGL-RKGMFKLSCKSSCS 128

BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match: A0A1R3HKK6 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28461 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.02e-08
Identity = 55/154 (35.71%), Postives = 70/154 (45.45%), Query Frame = 0

Query: 15  QTKM----NVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGL 74
           QTK+    NVPFSWE KPGV K  SQ       F   + KLP PPC  E+AR+S   S  
Sbjct: 3   QTKVHSQGNVPFSWENKPGVCKMTSQDCLKEDFF---LQKLPPPPCPPETARVSISNSIQ 62

Query: 75  ITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSR 134
               PP                 A+   S SS   G  KSDD     PF+ AYK+CT S 
Sbjct: 63  DNKIPPP--------------PGAFQPPSRSSSRRGLKKSDD-----PFLAAYKECTKST 122

Query: 135 SMS--GRGITGGSATNGVKRPNIIRRVLFSLSRK 162
           +     + + GG + N       +++ +FS S K
Sbjct: 123 NKGKLAKNVNGGGSGN-------LKKGVFSFSCK 127

BLAST of MELO3C016839.jh1 vs. ExPASy TrEMBL
Match: A0A2K1XNQ3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G012900 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.64e-08
Identity = 49/141 (34.75%), Postives = 68/141 (48.23%), Query Frame = 0

Query: 14  LQTKMNVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITY 73
           +Q+K+NVPFSWE KPGV K   Q      ++    LKLP PP                  
Sbjct: 7   VQSKVNVPFSWEQKPGVSKVTRQEVRPEDIWHF-RLKLPPPP------------------ 66

Query: 74  SPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMS 133
            PP C ++S +   D+  L+  S  S SSF     K     + DPF+ AYKKC  S  ++
Sbjct: 67  PPPPCASKSTKFPSDYS-LQVPSTPS-SSF-----KKGTRIQEDPFLRAYKKCIGS-PIN 118

Query: 134 GRGITGGSATNGVKRPNIIRR 154
           G+  + G   +G  RP I+R+
Sbjct: 127 GKLTSDGKTDHG--RPKIVRK 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0064469.15.60e-108100.00hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK201... [more]
XP_004141298.12.02e-9889.16uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetica... [more]
KAG6608406.14.57e-7471.08hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7037747.14.57e-7471.08hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyro... [more]
KDP41585.11.54e-0832.26hypothetical protein JCGZ_15992 [Jatropha curcas][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D9E32.71e-108100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KZZ96.72e-10390.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1[more]
A0A067LAQ47.45e-0932.26Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1[more]
A0A1R3HKK61.02e-0835.71Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28461 PE=4 SV=1[more]
A0A2K1XNQ33.64e-0834.75Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G012900 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33696T22J18.15-RELATEDcoord: 13..168
NoneNo IPR availablePANTHERPTHR33696:SF12BNAA08G25910D PROTEINcoord: 13..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016839.jh1.t1MELO3C016839.jh1.t1mRNA