MELO3C016470 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGAATTCATGCCTTGGCGACTAGGTATTCAGGACATTGAACTTCTTTGGTTTATTTTAGTTAATAGATTACATTTAATGCATCACACTATATGACATGTTATCTTATGACTAAGGCAAGTGTCTATCATAGGGCCTTTGGGGTCCACGCCCCCATGTTGAGAACTTAATAATTTGGTGAAATCTCTCTGAAAATTAGTGGGGTCTCAACATCCCATGTTATTGGATATTAGATGTCACTTATTCTGTTAATCTTTTTCATGTCTTTTCTTTTAAGCAACAGCCAAAAGATCAGACTATTTATTTTCATCCGTCTTCATTCTTATAAATACTATTATGTCTCAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTCAACTTTTTGATTCATGAATCATGAATGTGCAATTGCTTGTTTTTCTGCCTGGGGAAAATGAATACAGAAAGATATCAAGTGTGCTTTTCAAATATTCTTGAAATCAATTGTTTCTAAATGCATGACATCATTTAAGAATTTGAATACCTGCATTTCTTGTGATAGAGAAATTGCAGTGCAATTCAAATTAAAGATTATTCATGATAATGACCTTCTAATTCTTTTAAATATGTTTTCCCTCGGCAAGTAAACTAAATTTTCTTGCTAATGTTATGTGTTGTGTTCATACATGTAATATATAAAACTTAAAAGGTATACAGCATGTGAGCATACTTTTATGATTCTATATCTTGTTTGTCTATAATGTTGAGTACCTTCATGGGGCATTCTGTGCAGACAAAAATTCGTCCCCGGGCACAAAAGGGAGACTCGGTATCTTGAAAATTCATGCAAGCAAAGTGAAGATGTCGCACTCTGTTGATCTAAGCACCACGAAATTTACCTGGTTTGTTCTTTTTTTGCTTTTTATTATTGATCTGTAACTTTGTTTCTTGAAATGATATATCAAATGACCAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGACGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAAGTCTGTTCAAATGCTTCCTTATTTGTTTGTTGTGATAAAATTTTCTTTACTTGCATCGGTGTCAAACTGACATGCTCGGCTTAAATAATCCAACCGTGTCTAAAAGCAGTCATGGTTTGAGTCTTTTGTTTTACAGTTCGTTTTCGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGA ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGACGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAATTCGTTTTCGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGA ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGACGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAATTCGTTTTCGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGA MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERLVGSEVGSTCPGICSCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISIIPRGQFVFDLEPFSGTEWQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN Homology
BLAST of MELO3C016470 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 295.8 bits (756), Expect = 3.2e-76 Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0
BLAST of MELO3C016470 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 5.2e-26 Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0
HSP 2 Score: 295.8 bits (756), Expect = 3.2e-76 Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0
BLAST of MELO3C016470 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 5.2e-26 Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0
HSP 2 Score: 221.1 bits (562), Expect = 1.0e-53 Identity = 158/393 (40.20%), Postives = 175/393 (44.53%), Query Frame = 0
BLAST of MELO3C016470 vs. NCBI nr
Match: XP_016901157.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, partial [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 5.5e-52 Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0
BLAST of MELO3C016470 vs. NCBI nr
Match: KAA0044923.1 (putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa] >TYK16547.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa]) HSP 1 Score: 215.3 bits (547), Expect = 5.5e-52 Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: O22993 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI1 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.6e-46 Identity = 107/205 (52.20%), Postives = 125/205 (60.98%), Query Frame = 0
HSP 2 Score: 59.3 bits (142), Expect = 6.6e-08 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: D0MGU8 (ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) OX=518766 GN=ftsH PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13 Identity = 63/205 (30.73%), Postives = 92/205 (44.88%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: Q67LC0 (ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=ftsH1 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: Q67JH0 (ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=ftsH3 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13 Identity = 55/186 (29.57%), Postives = 82/186 (44.09%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: D1CDT8 (ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) OX=525904 GN=ftsH PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13 Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76 Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.5e-26 Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0
HSP 2 Score: 295.8 bits (756), Expect = 1.5e-76 Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.5e-26 Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0
HSP 2 Score: 215.3 bits (547), Expect = 2.6e-52 Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A1S4DYV7 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991187 PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 2.6e-52 Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0
BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A6J1J7X9 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483392 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51 Identity = 154/396 (38.89%), Postives = 173/396 (43.69%), Query Frame = 0
BLAST of MELO3C016470 vs. TAIR 10
Match: AT4G23940.1 (FtsH extracellular protease family ) HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47 Identity = 107/205 (52.20%), Postives = 125/205 (60.98%), Query Frame = 0
HSP 2 Score: 59.3 bits (142), Expect = 4.7e-09 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of MELO3C016470 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 ) HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13 Identity = 66/206 (32.04%), Postives = 91/206 (44.17%), Query Frame = 0
BLAST of MELO3C016470 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 ) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of MELO3C016470 vs. TAIR 10
Match: AT1G07510.1 (FTSH protease 10 ) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11 Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of MELO3C016470 vs. TAIR 10
Match: AT2G29080.1 (FTSH protease 3 ) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11 Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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