MELO3C016470 (gene) Melon (DHL92) v4

Overview


Name	MELO3C016470
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ATP-dependent zinc metalloprotease FtsH
Location	chr06: 27835558 .. 27837286 (+)
RNA-Seq Expression	MELO3C016470
Synteny	MELO3C016470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAATTCATGCCTTGGCGACTAGGTATTCAGGACATTGAACTTCTTTGGTTTATTTTAGTTAATAGATTACATTTAATGCATCACACTATATGACATGTTATCTTATGACTAAGGCAAGTGTCTATCATAGGGCCTTTGGGGTCCACGCCCCCATGTTGAGAACTTAATAATTTGGTGAAATCTCTCTGAAAATTAGTGGGGTCTCAACATCCCATGTTATTGGATATTAGATGTCACTTATTCTGTTAATCTTTTTCATGTCTTTTCTTTTAAGCAACAGCCAAAAGATCAGACTATTTATTTTCATCCGTCTTCATTCTTATAAATACTATTATGTCTCAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTCAACTTTTTGATTCATGAATCATGAATGTGCAATTGCTTGTTTTTCTGCCTGGGGAAAATGAATACAGAAAGATATCAAGTGTGCTTTTCAAATATTCTTGAAATCAATTGTTTCTAAATGCATGACATCATTTAAGAATTTGAATACCTGCATTTCTTGTGATAGAGAAATTGCAGTGCAATTCAAATTAAAGATTATTCATGATAATGACCTTCTAATTCTTTTAAATATGTTTTCCCTCGGCAAGTAAACTAAATTTTCTTGCTAATGTTATGTGTTGTGTTCATACATGTAATATATAAAACTTAAAAGGTATACAGCATGTGAGCATACTTTTATGATTCTATATCTTGTTTGTCTATAATGTTGAGTACCTTCATGGGGCATTCTGTGCAGACAAAAATTCGTCCCCGGGCACAAAAGGGAGACTCGGTATCTTGAAAATTCATGCAAGCAAAGTGAAGATGTCGCACTCTGTTGATCTAAGCACCACGAAATTTACCTGGTTTGTTCTTTTTTTGCTTTTTATTATTGATCTGTAACTTTGTTTCTTGAAATGATATATCAAATGACCAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGACGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAAGTCTGTTCAAATGCTTCCTTATTTGTTTGTTGTGATAAAATTTTCTTTACTTGCATCGGTGTCAAACTGACATGCTCGGCTTAAATAATCCAACCGTGTCTAAAAGCAGTCATGGTTTGAGTCTTTTGTTTTACAGTTCGTTTTCGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGA

mRNA sequence

ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGACGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAATTCGTTTTCGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGA

Coding sequence (CDS)

ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACTTCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATGAAAGGTTGGTCGGGAGCGAAGTTGGCTCAACTTGTCCAGGAATCTGCTCTTGTTGCTGTCAGGAAAGGCATGAATCTATTGTCCAGTCAGACATGGACGATGCAGTTGACTGGCATAGAGTTAGGTCATCAGGGGGACAATGCCGTAGAGCTACCACAGAAATGGGTGTTGCTATAACTTCACATTTGCTTAGGAGATATGAGAGTGCAAAAGTTGAATGCTGCGATCGCATTTCAATCATTCCTCGTGGTCAATTCGTTTTCGACCTTGAACCTTTTTCTGGAACTGAATGGCAGGTTCTCATCTTCCATGAGGAAATAATTGGAGAAGAAATCGACTTCATTCTAGACAATTACCCTCCACAAACACCTATTAGTGTTCTTTTTCAAGAGGAAAACCCTGGAAGACTACCTAGCCATGGATCAGTGGAGCCTGGGAAGGATGCAAAACCTGTATGTGAAATTGGAAACTGA

Protein sequence

MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERLVGSEVGSTCPGICSCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCDRISIIPRGQFVFDLEPFSGTEWQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKPVCEIGN

Homology

[Close]

BLAST of MELO3C016470 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 3.2e-76
Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 216 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 275

Query: 61  LLDPPLLRPGPFDER-------------------------------LVGSEVGSTCPGIC 120
           LLDPPLLRP                                     LVGSEVGSTCPGIC
Sbjct: 276 LLDPPLLRPDKNSSPGAKGRLGILKIHASKVKMSHSVDLSTTKFTWLVGSEVGSTCPGIC 335

Query: 121 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 159
           SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD
Sbjct: 336 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 395

[Close]

BLAST of MELO3C016470 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 5.2e-26
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 165  PFSGTEWQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 224
            P  G   QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP
Sbjct: 2053 PERGGWHQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 2112

Query: 225  VCEIGN 231
            VCEIGN
Sbjct: 2113 VCEIGN 2118

HSP 2 Score: 295.8 bits (756), Expect = 3.2e-76
Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 227 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 286

Query: 61  LLDPPLLRPGPFDER-------------------------------LVGSEVGSTCPGIC 120
           LLDPPLLRP                                     LVGSEVGSTCPGIC
Sbjct: 287 LLDPPLLRPDKNSSPGAKGRLGILKIHASKVKMSHSVDLSTTKFTWLVGSEVGSTCPGIC 346

Query: 121 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 159
           SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD
Sbjct: 347 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 406

[Close]

BLAST of MELO3C016470 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 5.2e-26
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 165  PFSGTEWQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 224
            P  G   QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP
Sbjct: 2064 PERGGWHQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 2123

Query: 225  VCEIGN 231
            VCEIGN
Sbjct: 2124 VCEIGN 2129

HSP 2 Score: 221.1 bits (562), Expect = 1.0e-53
Identity = 158/393 (40.20%), Postives = 175/393 (44.53%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STDLLYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 539 IDEIDALATRRQGIFKESTDLLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 598

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 599 LLDPALLRPGRFDRKIKIRPPGAKGRLDILRIHASKVKMSDSVDLSIYSQNLPGWSGAKL 658

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAIT 180
                       ++ HESIVQSDMDDAVD   V  R  G      GQCRRATTEMGVAIT
Sbjct: 659 AQLVQEAALVAVRKGHESIVQSDMDDAVDRLTVGPRRVGIELGHQGQCRRATTEMGVAIT 718

Query: 181 SHLLRRYESAKVECCDRISIIPRGQ--------------FVFDLEP-------------- 212
           SHLLR+YESAKVECCDRISIIPRGQ              ++F+  P              
Sbjct: 719 SHLLRKYESAKVECCDRISIIPRGQTLSQVVFRRLDDESYMFERRPQLLHRLQVFLGGRA 778

[Close]

BLAST of MELO3C016470 vs. NCBI nr
Match: XP_016901157.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic, partial [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 5.5e-52
Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTG+GVI LAAT RRD
Sbjct: 442 IDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIFLAATNRRD 501

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 502 LLDPALLRPGRFDRKIKIRPPGAKGRLDILKIHASKVKMSHSVDLSIYSQNLPGWSGAKL 561

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAIT 180
                       ++ HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAIT
Sbjct: 562 AQLVQEAALVAVRKGHESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAIT 621

Query: 181 SHLLRRYESAKVECCDRISIIPRGQ--------------FVFDLEP-------------- 212
           SHLLRRYESA+VECCDRISIIPRGQ              ++F+  P              
Sbjct: 622 SHLLRRYESARVECCDRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARA 681

[Close]

BLAST of MELO3C016470 vs. NCBI nr
Match: KAA0044923.1 (putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa] >TYK16547.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 5.5e-52
Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTG+GVI LAAT RRD
Sbjct: 539 IDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIFLAATNRRD 598

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 599 LLDPALLRPGRFDRKIKIRPPGAKGRLDILKIHASKVKMSHSVDLSIYSQNLPGWSGAKL 658

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAIT 180
                       ++ HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAIT
Sbjct: 659 AQLVQEAALVAVRKGHESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAIT 718

Query: 181 SHLLRRYESAKVECCDRISIIPRGQ--------------FVFDLEP-------------- 212
           SHLLRRYESA+VECCDRISIIPRGQ              ++F+  P              
Sbjct: 719 SHLLRRYESARVECCDRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARA 778

[Close]

BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: O22993 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI1 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-46
Identity = 107/205 (52.20%), Postives = 125/205 (60.98%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 528 IDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 587

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 588 LLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKL 647

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRVRSS--------GGQCRRATTEMGVAIT 159
                       ++ H SI+QSDMDDAVD   V  +         GQCRRATTE+GVAIT
Sbjct: 648 AQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAIT 707

HSP 2 Score: 59.3 bits (142), Expect = 6.6e-08
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 172 QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLP 212
           +VL+  +EI GE IDFILD+YPPQTP++ L QE+NPG LP
Sbjct: 881 KVLLNQKEISGEAIDFILDHYPPQTPLNSLLQEQNPGSLP 920

[Close]

BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: D0MGU8 (ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) OX=518766 GN=ftsH PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 63/205 (30.73%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 1   MDGIHALA-TRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRR 60
           +D I A+  +R +GI   + D        ERE TLNQLLVE+DGF+T KGVI++AAT R 
Sbjct: 309 IDEIDAIGRSRGRGIMMGAND--------ERENTLNQLLVEMDGFNTDKGVIIMAATNRP 368

Query: 61  DLLDPPLLRPGPFDERLV---------------------------------------GSE 120
           D+LDP LLRPG FD +++                                       G+E
Sbjct: 369 DVLDPALLRPGRFDRQILIDKPDRRERLEIFKVHTRDLILGDDVDLEVLAGQTPGFAGAE 428

Query: 121 VGSTCPGICSCCCQERHESIVQSDMDDAVD--------WHRVRSSGGQCRRATTEMGVAI 158
           + + C        ++  E++   D + A+D         +++ S   +   A  E G AI
Sbjct: 429 IANVCNEAALLAARKGKEAVEMEDFEQAIDRVIAGLEKKNKIISPEEREIVAYHEAGHAI 488

[Close]

BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: Q67LC0 (ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=ftsH1 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALA RR+G+            T ERE T+NQLLVE+DGFD+G+GVI++AAT R D
Sbjct: 244 IDEIDALA-RRRGVGA-------GGGTEEREQTINQLLVEMDGFDSGEGVIVVAATNRPD 303

Query: 61  LLDPPLLRPGPFDERL 77
           +LDP +LRPG FD  L
Sbjct: 304 VLDPAVLRPGRFDRHL 311

[Close]

BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: Q67JH0 (ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=ftsH3 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13
Identity = 55/186 (29.57%), Postives = 82/186 (44.09%), Query Frame = 0


Query: 23  YNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERLV----- 82
           Y     ERE TLNQLLVE+DGF   +G+I++AAT R D+LDP LLRPG FD ++V     
Sbjct: 269 YGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPD 328

Query: 83  ----------------------------------GSEVGSTCPGICSCCCQERHESIVQS 142
                                             G+++ +          + R + I   
Sbjct: 329 LKGRLAIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQ 388

Query: 143 DMDDAVDWHRVRSSGGQCR-----------RATTEMGVAITSHLLRRYESAKVECCDRIS 159
           D++DA+D  RV + G + +            A  E G A+  H+L       ++   +I+
Sbjct: 389 DVEDAID--RVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHML-----PHMDPLHKIT 447

[Close]

BLAST of MELO3C016470 vs. ExPASy Swiss-Prot
Match: D1CDT8 (ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) OX=525904 GN=ftsH PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERLV 78
           ERE TLNQLLVE+DGFD+ +GVI+LAAT R D+LDP LLRPG FD R+V
Sbjct: 316 EREQTLNQLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRRVV 364

[Close]

BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 227 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 286

Query: 61  LLDPPLLRPGPFDER-------------------------------LVGSEVGSTCPGIC 120
           LLDPPLLRP                                     LVGSEVGSTCPGIC
Sbjct: 287 LLDPPLLRPDKNSSPGAKGRLGILKIHASKVKMSHSVDLSTTKFTWLVGSEVGSTCPGIC 346

Query: 121 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 159
           SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD
Sbjct: 347 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 406

[Close]

BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-26
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 165  PFSGTEWQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 224
            P  G   QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP
Sbjct: 2064 PERGGWHQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 2123

Query: 225  VCEIGN 231
            VCEIGN
Sbjct: 2124 VCEIGN 2129

HSP 2 Score: 295.8 bits (756), Expect = 1.5e-76
Identity = 152/189 (80.42%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD
Sbjct: 216 MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 275

Query: 61  LLDPPLLRPGPFDER-------------------------------LVGSEVGSTCPGIC 120
           LLDPPLLRP                                     LVGSEVGSTCPGIC
Sbjct: 276 LLDPPLLRPDKNSSPGAKGRLGILKIHASKVKMSHSVDLSTTKFTWLVGSEVGSTCPGIC 335

Query: 121 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 159
           SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD
Sbjct: 336 SCCCQERHESIVQSDMDDAVDWHRVRSSGGQCRRATTEMGVAITSHLLRRYESAKVECCD 395

[Close]

BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-26
Identity = 61/66 (92.42%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 165  PFSGTEWQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 224
            P  G   QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP
Sbjct: 2053 PERGGWHQVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLPSHGSVEPGKDAKP 2112

Query: 225  VCEIGN 231
            VCEIGN
Sbjct: 2113 VCEIGN 2118

HSP 2 Score: 215.3 bits (547), Expect = 2.6e-52
Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTG+GVI LAAT RRD
Sbjct: 539 IDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIFLAATNRRD 598

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 599 LLDPALLRPGRFDRKIKIRPPGAKGRLDILKIHASKVKMSHSVDLSIYSQNLPGWSGAKL 658

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAIT 180
                       ++ HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAIT
Sbjct: 659 AQLVQEAALVAVRKGHESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAIT 718

Query: 181 SHLLRRYESAKVECCDRISIIPRGQ--------------FVFDLEP-------------- 212
           SHLLRRYESA+VECCDRISIIPRGQ              ++F+  P              
Sbjct: 719 SHLLRRYESARVECCDRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARA 778

[Close]

BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A1S4DYV7 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991187 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.6e-52
Identity = 153/393 (38.93%), Postives = 174/393 (44.27%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTG+GVI LAAT RRD
Sbjct: 442 IDEIDALATRRQGIFKESTDNLYNAATQERETTLNQLLIELDGFDTGRGVIFLAATNRRD 501

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 502 LLDPALLRPGRFDRKIKIRPPGAKGRLDILKIHASKVKMSHSVDLSIYSQNLPGWSGAKL 561

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAIT 180
                       ++ HESI QSDMDDA+D   V  R  G      GQCRRATTE+GVAIT
Sbjct: 562 AQLVQEAALVAVRKGHESIDQSDMDDAIDRLTVGPRRIGIELGHQGQCRRATTEIGVAIT 621

Query: 181 SHLLRRYESAKVECCDRISIIPRGQ--------------FVFDLEP-------------- 212
           SHLLRRYESA+VECCDRISIIPRGQ              ++F+  P              
Sbjct: 622 SHLLRRYESARVECCDRISIIPRGQTLSQVVFRRLSEESYIFERRPQLLHRLQVFLGARA 681

[Close]

BLAST of MELO3C016470 vs. ExPASy TrEMBL
Match: A0A6J1J7X9 (probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483392 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 154/396 (38.89%), Postives = 173/396 (43.69%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQG FK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRD
Sbjct: 540 IDEIDALATRRQGTFKESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLAATNRRD 599

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 600 LLDPALLRPGRFDRKIKIRPPGVKGRLDILKIHASKVKMSDSVDLSIYSQNLPGWTGAKL 659

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRV--RSSG------GQCRRATTEMGVAIT 180
                       ++ HESI QSDM+DAVD   V  R  G      GQCRRATTEMGVA+ 
Sbjct: 660 AQLVQEAALVAVRKGHESIAQSDMNDAVDRLTVGPRRVGIELGHQGQCRRATTEMGVAMI 719

Query: 181 SHLLRRYESAKVECCDRISIIPRGQ--------------FVFDLEP-------------- 215
           SHLLRRYE+AKVECCDRISIIPRGQ              ++F+  P              
Sbjct: 720 SHLLRRYENAKVECCDRISIIPRGQTLSQVVFRRLDDESYMFERRPQLLHRLQVLLGGRA 779

[Close]

BLAST of MELO3C016470 vs. TAIR 10
Match: AT4G23940.1 (FtsH extracellular protease family )

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47
Identity = 107/205 (52.20%), Postives = 125/205 (60.98%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRD
Sbjct: 528 IDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRD 587

Query: 61  LLDPPLLRPGPFDERL---------------------------------------VGSEV 120
           LLDP LLRPG FD ++                                        G+++
Sbjct: 588 LLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKL 647

Query: 121 GSTCPGICSCCCQERHESIVQSDMDDAVDWHRVRSS--------GGQCRRATTEMGVAIT 159
                       ++ H SI+QSDMDDAVD   V  +         GQCRRATTE+GVAIT
Sbjct: 648 AQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAIT 707

HSP 2 Score: 59.3 bits (142), Expect = 4.7e-09
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 172 QVLIFHEEIIGEEIDFILDNYPPQTPISVLFQEENPGRLP 212
           +VL+  +EI GE IDFILD+YPPQTP++ L QE+NPG LP
Sbjct: 881 KVLLNQKEISGEAIDFILDHYPPQTPLNSLLQEQNPGSLP 920

[Close]

BLAST of MELO3C016470 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 )

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 66/206 (32.04%), Postives = 91/206 (44.17%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I A+A  R G F+  ++        ERE TLNQLL E+DGFD+   VI+L AT R D
Sbjct: 423 IDEIDAVAKSRDGKFRMGSN-------DEREQTLNQLLTEMDGFDSNSAVIVLGATNRAD 482

Query: 61  LLDPPLLRPGPFDERLVGSEVGSTCPGICSCCCQERHESIVQSDMDDAVDWHRVRSSGGQ 120
           +LDP L RPG FD R+V  E   T   I        H S  +  + D V+   + S    
Sbjct: 483 VLDPALRRPGRFD-RVVTVE---TPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTG 542

Query: 121 CRRATTEMGVAITSHLLRRYESAKVECCDRISIIPRGQFVFDLEP--FSGTEWQVLIFHE 180
              A     V   + L  R     VE  D I  + R     + +     G E  V+  HE
Sbjct: 543 FTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHE 602

Query: 181 ---EIIGEEIDFILDNYPPQTPISVL 202
               ++G  +  +L   P    +S+L
Sbjct: 603 AGHAVVGTAVANLLTGQPRVEKLSIL 617

[Close]

BLAST of MELO3C016470 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 )

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11
Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRD 60
           +D I A+A  R G F+         +  ERE TLNQLL E+DGFD+   VI+L AT R D
Sbjct: 427 IDEIDAVAKSRDGKFRM-------VSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRAD 486

Query: 61  LLDPPLLRPGPFD 74
           +LDP L RPG FD
Sbjct: 487 VLDPALRRPGRFD 492

[Close]

BLAST of MELO3C016470 vs. TAIR 10
Match: AT1G07510.1 (FTSH protease 10 )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERL 77
           ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD ++
Sbjct: 446 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 493

[Close]

BLAST of MELO3C016470 vs. TAIR 10
Match: AT2G29080.1 (FTSH protease 3 )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 29  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERL 77
           ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD ++
Sbjct: 440 ERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQI 487

The following BLAST results are available for this feature:

BLAST of MELO3C016470 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00786.1	3.2e-76	80.42	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK00786.1	5.2e-26	92.42	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060543.1	5.2e-26	92.42	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_016901157.1	5.5e-52	38.93	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chlorop...	[more]
KAA0044923.1	5.5e-52	38.93	putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. ...	[more]

BLAST of MELO3C016470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22993	1.6e-46	52.20	Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=A...	[more]
D0MGU8	1.0e-13	30.73	ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus (strain ATCC 438...	[more]
Q67LC0	3.0e-13	55.26	ATP-dependent zinc metalloprotease FtsH 1 OS=Symbiobacterium thermophilum (strai...	[more]
Q67JH0	3.0e-13	29.57	ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium thermophilum (strai...	[more]
D1CDT8	6.8e-13	73.47	ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC B...	[more]

BLAST of MELO3C016470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UX59	1.5e-76	80.42	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UX59	2.5e-26	92.42	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BRA0	2.5e-26	92.42	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DYV7	2.6e-52	38.93	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=C...	[more]
A0A6J1J7X9	1.3e-51	38.89	probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=C...	[more]

BLAST of MELO3C016470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23940.1	1.1e-47	52.20	FtsH extracellular protease family	[more]
AT3G47060.1	4.1e-13	32.04	FTSH protease 7	[more]
AT5G58870.1	1.0e-11	50.68	FTSH protease 9	[more]
AT1G07510.1	2.2e-11	64.58	FTSH protease 10	[more]
AT2G29080.1	2.2e-11	64.58	FTSH protease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..77 e-value: 4.0E-12 score: 48.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 29..76
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 1..76 e-value: 1.1E-8 score: 35.5
None	No IPR available	PANTHER	PTHR23076:SF111	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATED	coord: 77..159 coord: 172..215
None	No IPR available	PANTHER	PTHR23076:SF111	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 1, CHLOROPLASTIC-RELATED	coord: 2..75
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 2..75 coord: 77..159 coord: 172..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016470.1	MELO3C016470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity