MELO3C016458 (gene) Melon (DHL92) v4

Overview


Name	MELO3C016458
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RWP-RK domain-containing protein
Location	chr06: 28076888 .. 28077752 (+)
RNA-Seq Expression	MELO3C016458
Synteny	MELO3C016458

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCATCTTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAGCCATGCTGCAACATCTGACGCCGCCCAAGTCCGACTCCAGTCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGAAGGACTTCTTCTCTAAAGGAAATAATAGTGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAGAAGCAGCAAAAGAGATAAATATTGGTTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTAAATTCTCTCATCCAAAATGTGAAGGTATGTGTATCATTTATAAGTTGCCATCCACGTTGGATGTTGTTGGATAAAAATTTTGGTTCTCAGTTTTTTGGAAAACCTACAAGTACTCACTGATCTACATCCAACTTTTTTGACTTACTATCTACTCTTTACTAATAATTTTTAAATAAAAAATAGTTTTCGAATAAAAGTACCTTTCCTTTCCATGAACTTTTATTATACATACTTAAGAAAAGTAGATGTAAATGTTGATTATTGGGTGTTAATGTTGATGAATGTTATTTGTTTGGCAGGAAATGAGGTTAACAAATGAGGTAAAAGGGTTGGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAATATGGACCTCACCCATACAATCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA

mRNA sequence

ATGCCTCATCTTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAGCCATGCTGCAACATCTGACGCCGCCCAAGACTTCTTCTCTAAAGGAAATAATAGTGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAGAAGCAGCAAAAGAGATAAATATTGGTTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTAAATTCTCTCATCCAAAATGTGAAGGAAATGAGGTTAACAAATGAGGTAAAAGGGTTGGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAATATGGACCTCACCCATACAATCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA

Coding sequence (CDS)

ATGCCTCATCTTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAGCCATGCTGCAACATCTGACGCCGCCCAAGACTTCTTCTCTAAAGGAAATAATAGTGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAGAAGCAGCAAAAGAGATAAATATTGGTTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTAAATTCTCTCATCCAAAATGTGAAGGAAATGAGGTTAACAAATGAGGTAAAAGGGTTGGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAATATGGACCTCACCCATACAATCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA

Protein sequence

MPHLMPPMLTPVASSTKSDSYCYRDANSSHAATSDAAQDFFSKGNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRSNNIASLHH

Homology

[Close]

BLAST of MELO3C016458 vs. NCBI nr
Match: TYK29190.1 (protein RKD4 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 111 GNNNGNKRRKGSFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 170

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 171 SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 230

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 231 NNIASLHH 238

[Close]

BLAST of MELO3C016458 vs. NCBI nr
Match: KAA0050515.1 (protein RKD4 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 2   GNNNGNKRRKGSFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 61

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 62  SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 121

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 122 NNIASLHH 129

[Close]

BLAST of MELO3C016458 vs. NCBI nr
Match: XP_008466842.1 (PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 248.4 bits (633), Expect = 4.3e-62
Identity = 122/128 (95.31%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPIS+AAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 106 GNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 165

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 166 SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 225

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 226 NNIASLHH 233

[Close]

BLAST of MELO3C016458 vs. NCBI nr
Match: XP_031738302.1 (protein RKD4 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 7.4e-54
Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 45  NNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKS 104
           NN+GNKRRK SFVLGLEEI+KY+HIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRK KS
Sbjct: 104 NNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKS 163

Query: 105 LNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRSN 164
            NSLIQNVKEM LTNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSN
Sbjct: 164 YNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSN 223

Query: 165 NIASLHH 172
           NIASLHH
Sbjct: 224 NIASLHH 230

[Close]

BLAST of MELO3C016458 vs. NCBI nr
Match: KAE8650549.1 (hypothetical protein Csa_011321 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 7.4e-54
Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 45  NNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKS 104
           NN+GNKRRK SFVLGLEEI+KY+HIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRK KS
Sbjct: 3   NNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKS 62

Query: 105 LNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRSN 164
            NSLIQNVKEM LTNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSN
Sbjct: 63  YNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSN 122

Query: 165 NIASLHH 172
           NIASLHH
Sbjct: 123 NIASLHH 129

[Close]

BLAST of MELO3C016458 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 63/113 (55.75%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 49  NKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSL 108
           N ++K    L + EI+++F  PI +AAKE+N+GLTVLK+RCR+L I RWPHRK KSLNSL
Sbjct: 139 NLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSL 198

Query: 109 IQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRL 162
           I+N+K + +  EVK LEEH+ L+E+ P+ +L+   K+LRQACFKANYK+ + L
Sbjct: 199 IKNLKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]

BLAST of MELO3C016458 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 58/119 (48.74%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 58  LGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-- 117
           L  E + +YF++PI++AA  +N+GLT+LKRRCR+L I RWPHRK  SLN+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 118 --------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANY--KKNRRLRSN 165
                   +L + ++ LE+ KR +E++P+++     KRLRQACFKAN+  KK R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]

BLAST of MELO3C016458 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 55/116 (47.41%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 61  EEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----- 120
           E +++YF++PI++AAKE+NIG+T+LK+RCR+L I RWPHRK  SLN+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 121 ------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRSNN 166
                 +L N ++ LE  K+++EE+P+++     KRLRQACFKA YK+ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]

BLAST of MELO3C016458 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-23
Identity = 70/175 (40.00%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 7   PMLTPVA-SSTKSDSYCYRDANSSHAATSDAAQDFFSKGNNSGNKRRK----------GS 66
           P L P++  S ++D      + S  A  +    DF  K   +  K+R+           S
Sbjct: 66  PDLEPISIVSHEADILSVYGSASWTAEETMFVSDFAKKSETTTTKKRRCREECFSSCSVS 125

Query: 67  FVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM 126
             L  E I  YF++PI++AA+E+NIGLT+LK+RCR+L I RWPHRK  SL  LI NVKE+
Sbjct: 126 KTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKEL 185

Query: 127 ----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR 161
                     +L N ++ LE+ K+ +E++P++      KRLRQACFKAN+K+ RR
Sbjct: 186 EKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]

BLAST of MELO3C016458 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-13
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 27  NSSHAATSDAAQDFFSKGNNSGNKRRKGSFV--LGLEEIRKYFHIPISEAAKEINIGLTV 86
           + +  + SDA  +   K      KR     V  L LEE+ KYF + I EA++ + +GLTV
Sbjct: 214 DKTEQSESDAKTEILKK-----KKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTV 273

Query: 87  LKRRCRQLNIMRWPHRKHKSLNSLIQNVKE-------------MRLTNEVKGLEEHKRLL 146
           LK++CR+  I RWPHRK KSL+ LI +++              M +  + + LE  KR +
Sbjct: 274 LKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNI 333

Query: 147 EEMPNMDLTHTIKRLRQACFKANYKKNR 160
            + P M++    K+ RQ  FK  ++ +R
Sbjct: 334 VKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]

BLAST of MELO3C016458 vs. ExPASy TrEMBL
Match: A0A5A7UAA0 (Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001590 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.2e-63
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 2   GNNNGNKRRKGSFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 61

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 62  SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 121

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 122 NNIASLHH 129

[Close]

BLAST of MELO3C016458 vs. ExPASy TrEMBL
Match: A0A5D3E104 (Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003820 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.2e-63
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 111 GNNNGNKRRKGSFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 170

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 171 SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 230

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 231 NNIASLHH 238

[Close]

BLAST of MELO3C016458 vs. ExPASy TrEMBL
Match: E5GBA6 (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 122/128 (95.31%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPIS+AAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 106 GNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 165

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 166 SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 225

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 226 NNIASLHH 233

[Close]

BLAST of MELO3C016458 vs. ExPASy TrEMBL
Match: A0A1S3CS47 (protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 122/128 (95.31%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 44  GNNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHK 103
           GNN+GNKRRKGSFVLGLEEIRKYFHIPIS+AAKE+N+GLTVLKRRCRQLNIMRWPHRKHK
Sbjct: 106 GNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 165

Query: 104 SLNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRS 163
           SLNSLIQNVKEM LTNEVKGLEEHKRLLEEMPNMDLTHT+KRLRQACFKANYKKNRRLRS
Sbjct: 166 SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 225

Query: 164 NNIASLHH 172
           NNIASLHH
Sbjct: 226 NNIASLHH 233

[Close]

BLAST of MELO3C016458 vs. ExPASy TrEMBL
Match: A0A0A0L6Q6 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.6e-54
Identity = 111/127 (87.40%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 45  NNSGNKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKS 104
           NN+GNKRRK SFVLGLEEI+KY+HIPISEAAKE+N+GLTVLKRRCRQLNIMRWPHRK KS
Sbjct: 158 NNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKS 217

Query: 105 LNSLIQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRSN 164
            NSLIQNVKEM LTNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSN
Sbjct: 218 YNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSN 277

Query: 165 NIASLHH 172
           NIASLHH
Sbjct: 278 NIASLHH 284

[Close]

BLAST of MELO3C016458 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 63/113 (55.75%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 49  NKRRKGSFVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSL 108
           N ++K    L + EI+++F  PI +AAKE+N+GLTVLK+RCR+L I RWPHRK KSLNSL
Sbjct: 139 NLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSL 198

Query: 109 IQNVKEMRLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRL 162
           I+N+K + +  EVK LEEH+ L+E+ P+ +L+   K+LRQACFKANYK+ + L
Sbjct: 199 IKNLKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]

BLAST of MELO3C016458 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 111.3 bits (277), Expect = 7.7e-25
Identity = 58/119 (48.74%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 58  LGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-- 117
           L  E + +YF++PI++AA  +N+GLT+LKRRCR+L I RWPHRK  SLN+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 118 --------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANY--KKNRRLRSN 165
                   +L + ++ LE+ KR +E++P+++     KRLRQACFKAN+  KK R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]

BLAST of MELO3C016458 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24
Identity = 55/116 (47.41%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 61  EEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----- 120
           E +++YF++PI++AAKE+NIG+T+LK+RCR+L I RWPHRK  SLN+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 121 ------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRLRSNN 166
                 +L N ++ LE  K+++EE+P+++     KRLRQACFKA YK+ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]

BLAST of MELO3C016458 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 70/175 (40.00%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 7   PMLTPVA-SSTKSDSYCYRDANSSHAATSDAAQDFFSKGNNSGNKRRK----------GS 66
           P L P++  S ++D      + S  A  +    DF  K   +  K+R+           S
Sbjct: 66  PDLEPISIVSHEADILSVYGSASWTAEETMFVSDFAKKSETTTTKKRRCREECFSSCSVS 125

Query: 67  FVLGLEEIRKYFHIPISEAAKEINIGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM 126
             L  E I  YF++PI++AA+E+NIGLT+LK+RCR+L I RWPHRK  SL  LI NVKE+
Sbjct: 126 KTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKEL 185

Query: 127 ----------RLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR 161
                     +L N ++ LE+ K+ +E++P++      KRLRQACFKAN+K+ RR
Sbjct: 186 EKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]

BLAST of MELO3C016458 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-14
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 27  NSSHAATSDAAQDFFSKGNNSGNKRRKGSFV--LGLEEIRKYFHIPISEAAKEINIGLTV 86
           + +  + SDA  +   K      KR     V  L LEE+ KYF + I EA++ + +GLTV
Sbjct: 214 DKTEQSESDAKTEILKK-----KKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTV 273

Query: 87  LKRRCRQLNIMRWPHRKHKSLNSLIQNVKE-------------MRLTNEVKGLEEHKRLL 146
           LK++CR+  I RWPHRK KSL+ LI +++              M +  + + LE  KR +
Sbjct: 274 LKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNI 333

Query: 147 EEMPNMDLTHTIKRLRQACFKANYKKNR 160
            + P M++    K+ RQ  FK  ++ +R
Sbjct: 334 VKRPFMEIGIETKKFRQENFKKRHRASR 356

The following BLAST results are available for this feature:

BLAST of MELO3C016458 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29190.1	1.5e-62	96.09	protein RKD4 [Cucumis melo var. makuwa]	[more]
KAA0050515.1	1.5e-62	96.09	protein RKD4 [Cucumis melo var. makuwa]	[more]
XP_008466842.1	4.3e-62	95.31	PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis...	[more]
XP_031738302.1	7.4e-54	87.40	protein RKD4 [Cucumis sativus]	[more]
KAE8650549.1	7.4e-54	87.40	hypothetical protein Csa_011321 [Cucumis sativus]	[more]

BLAST of MELO3C016458 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU8	1.7e-29	55.75	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9CA66	1.1e-23	48.74	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
Q9FGD1	1.4e-23	47.41	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
Q9M9U9	2.4e-23	40.00	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
O81791	3.9e-13	33.78	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]

BLAST of MELO3C016458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAA0	7.2e-63	96.09	Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001590 ...	[more]
A0A5D3E104	7.2e-63	96.09	Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003820 ...	[more]
E5GBA6	2.1e-62	95.31	Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CS47	2.1e-62	95.31	protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1	[more]
A0A0A0L6Q6	3.6e-54	87.40	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4...	[more]

BLAST of MELO3C016458 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53040.1	1.2e-30	55.75	RWP-RK domain-containing protein	[more]
AT1G74480.1	7.7e-25	48.74	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.0e-24	47.41	RWP-RK domain-containing protein	[more]
AT1G18790.1	1.7e-24	40.00	RWP-RK domain-containing protein	[more]
AT4G35590.1	2.7e-14	33.78	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	PANTHER	PTHR46373:SF2	PROTEIN RKD4	coord: 30..161
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 59..105 e-value: 3.5E-22 score: 78.1
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 45..127 score: 17.836727
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 30..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016458.1	MELO3C016458.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity